C11orf48 30142

Name: C11orf48	Sequence: fasta or formatted (263aa)		NCBI GI: 46198301
Description: hypothetical protein LOC79081		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 22 2 C cysteine 3.0 8 1 D aspartate 6.8 18 1 E glutamate 11.8 31 3 F phenylalanine 3.0 8 2 G glycine 8.4 22 2 H histidine 4.2 11 1 I isoleucine 1.5 4 1 K lysine 2.3 6 1 L leucine 6.5 17 4 M methionine 0.4 1 1 N asparagine 2.3 6 1 P proline 9.5 25 2 Q glutamine 5.7 15 1 R arginine 4.9 13 1 S serine 9.9 26 2 T threonine 3.8 10 1 V valine 4.2 11 2 W tryptophan 2.7 7 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC79081 LBH 0.024 limb bud and heart development homolog BASP1 0.022 brain abundant, membrane attached signal protein 1 [... HJURP 0.015 Holliday junction recognition protein KCP 0.013 cysteine rich BMP regulator 2 isoform 2 GNAS 0.013 GNAS complex locus XLas KCP 0.013 cysteine rich BMP regulator 2 isoform 1 SP6 0.013 Sp6 transcription factor SSH2 0.011 slingshot 2 MLL 0.011 myeloid/lymphoid or mixed-lineage leukemia protein [... USP40 0.011 ubiquitin thioesterase 40 MARCKS 0.011 myristoylated alanine-rich protein kinase C substra... THAP10 0.011 THAP domain containing 10 STARD8 0.011 StAR-related lipid transfer (START) domain containi... STARD8 0.011 StAR-related lipid transfer (START) domain containi... STARD8 0.011 StAR-related lipid transfer (START) domain containin... NACA 0.011 nascent polypeptide-associated complex alpha subuni... TNFRSF1B 0.009 tumor necrosis factor receptor 2 precursor PTPRK 0.009 protein tyrosine phosphatase, receptor type, K isof... PTPRK 0.009 protein tyrosine phosphatase, receptor type, K isofo... SPNS2 0.009 spinster homolog 2 MEFV 0.009 Mediterranean fever protein KIAA1217 0.009 sickle tail isoform 1 HDGF2 0.009 hepatoma-derived growth factor-related protein 2 iso... LOC100130884 0.009 PREDICTED: hypothetical protein LOC100130884 0.009 PREDICTED: hypothetical protein LOC100130884 0.009 PREDICTED: hypothetical protein ITPKA 0.009 1D-myo-inositol-trisphosphate 3-kinase A FOXJ2 0.009 forkhead box J2 SHROOM2 0.009 apical protein of Xenopus-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.