Search of human proteins with 45827739

Search of human proteins with 45827739

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45827739 vitamin K epoxide reductase complex, subunit 1
isoform 2 [Homo sapiens]
         (92 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45827739 vitamin K epoxide reductase complex, subunit 1 isofo...   193   3e-50
gi|13124770 vitamin K epoxide reductase complex, subunit 1 isofo...   121   1e-28
gi|46309463 vitamin K epoxide reductase complex, subunit 1-like ...    54   2e-08
gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo ...    29   0.72 
gi|239754514 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|239749075 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|239743101 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|239508755 PREDICTED: hypothetical protein [Homo sapiens]            26   7.9  
gi|61743980 stabilin 2 precursor [Homo sapiens]                        26   7.9  

>gi|45827739 vitamin K epoxide reductase complex, subunit 1
          isoform 2 [Homo sapiens]
          Length = 92

 Score =  193 bits (490), Expect = 3e-50
 Identities = 92/92 (100%), Positives = 92/92 (100%)

Query: 1  MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSRLP 60
          MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSRLP
Sbjct: 1  MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSRLP 60

Query: 61 ADTLGLCPDAAELPGVSRWFCLPGLDPVLRAL 92
          ADTLGLCPDAAELPGVSRWFCLPGLDPVLRAL
Sbjct: 61 ADTLGLCPDAAELPGVSRWFCLPGLDPVLRAL 92


>gi|13124770 vitamin K epoxide reductase complex, subunit 1
          isoform 1 [Homo sapiens]
          Length = 163

 Score =  121 bits (304), Expect = 1e-28
 Identities = 58/58 (100%), Positives = 58/58 (100%)

Query: 1  MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSR 58
          MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSR
Sbjct: 1  MGSTWGSPGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSR 58


>gi|46309463 vitamin K epoxide reductase complex, subunit 1-like 1
          [Homo sapiens]
          Length = 176

 Score = 54.3 bits (129), Expect = 2e-08
 Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 3/54 (5%)

Query: 8  PGWVRLA---LCLTGLVLSLYALHVKAARARDRDYRALCDVGTAISCSRVFSSR 58
          P W R+A   +C  G++LS+YA HV+  + RD ++RALCD+G  + CS   +SR
Sbjct: 12 PRWERVARYAVCAAGILLSIYAYHVEREKERDPEHRALCDLGPWVKCSAALASR 65


>gi|239752201 PREDICTED: hypothetical protein XP_002348147 [Homo
           sapiens]
          Length = 935

 Score = 29.3 bits (64), Expect = 0.72
 Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 12/75 (16%)

Query: 8   PGWVRLALCLTGLVLSLYALHVKAARARDRDYRALCDVGTA--------ISCSRVFSSRL 59
           P  +R+ +CL  L LS+   H +A R    D+RA+C+   A          C +  + +L
Sbjct: 670 PSRMRMRVCLC-LCLSM---HAQAERGLRADHRAICNEDAAGEAERRHPPPCHKSPALKL 725

Query: 60  PADTLGLCPDAAELP 74
           P  T G     A LP
Sbjct: 726 PGMTTGATTQTATLP 740


>gi|239754514 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 260

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 42  LCDVGTAISCSRVFSSRLPADT----LGLCPDAAELPGVSRWFCLPGLDPV 88
           L  + T+  CS V SSR P+ T    L     A  +P    WF LP ++ V
Sbjct: 205 LTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQV 255


>gi|239749075 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 186

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 42  LCDVGTAISCSRVFSSRLPADT----LGLCPDAAELPGVSRWFCLPGLDPV 88
           L  + T+  CS V SSR P+ T    L     A  +P    WF LP ++ V
Sbjct: 131 LTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQV 181


>gi|239743101 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 186

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 42  LCDVGTAISCSRVFSSRLPADT----LGLCPDAAELPGVSRWFCLPGLDPV 88
           L  + T+  CS V SSR P+ T    L     A  +P    WF LP ++ V
Sbjct: 131 LTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQV 181


>gi|239508755 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 186

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 42  LCDVGTAISCSRVFSSRLPADT----LGLCPDAAELPGVSRWFCLPGLDPV 88
           L  + T+  CS V SSR P+ T    L     A  +P    WF LP ++ V
Sbjct: 131 LTSLPTSGLCSHVTSSRRPSPTTLSSLPPLTPAFPVPLTLLWFILPDIEQV 181


>gi|61743980 stabilin 2 precursor [Homo sapiens]
          Length = 2551

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)

Query: 45  VGTAISCSRVFSSRLPADT 63
           +GT +SCS V+ SR PA++
Sbjct: 674 LGTCVSCSLVYWSRCPANS 692


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.472 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,778,586
Number of Sequences: 37866
Number of extensions: 133070
Number of successful extensions: 412
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 408
Number of HSP's gapped (non-prelim): 9
length of query: 92
length of database: 18,247,518
effective HSP length: 63
effective length of query: 29
effective length of database: 15,861,960
effective search space: 459996840
effective search space used: 459996840
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.