Guide to the Human Genome
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Name: LOC100128081 Sequence: fasta or formatted (260aa) NCBI GI: 239754514
Description:

PREDICTED: hypothetical protein

Not currently referenced in the text

Other entries for this name:
alt prot {186aa} PREDICTED: hypothetical protein
alt prot {186aa} PREDICTED: hypothetical protein
alt prot {186aa} PREDICTED: hypothetical protein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         18           3
 C cysteine            3.5          9           2
 D aspartate           2.3          6           1
 E glutamate           2.3          6           1
 F phenylalanine       1.9          5           1
 G glycine             5.8         15           2
 H histidine           1.9          5           1
 I isoleucine          1.9          5           1
 K lysine              3.5          9           1
 L leucine            10.0         26           2
 M methionine          1.9          5           1
 N asparagine          1.5          4           1
 P proline            15.4         40           5
 Q glutamine           4.2         11           1
 R arginine            8.8         23           3
 S serine             11.5         30           3
 T threonine           5.4         14           2
 V valine              5.4         14           2
 W tryptophan          4.2         11           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein 
LOC100128081          0.699   PREDICTED: hypothetical protein 
LOC100128081          0.699   PREDICTED: hypothetical protein 
LOC100128081          0.699   PREDICTED: hypothetical protein 
WIPF1                 0.037   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.037   WAS/WASL interacting protein family, member 1 
WASL                  0.032   Wiskott-Aldrich syndrome gene-like protein 
WIPF2                 0.030   WIRE protein 
WBP11                 0.028   WW domain binding protein 11 
FLJ22184              0.028   PREDICTED: hypothetical protein FLJ22184 
TAF4                  0.028   TBP-associated factor 4 
INF2                  0.028   inverted formin 2 isoform 2 
INF2                  0.028   inverted formin 2 isoform 1 
SSBP3                 0.028   single stranded DNA binding protein 3 isoform a [Hom...
PRR12                 0.028   proline rich 12 
ZNF828                0.026   zinc finger protein 828 
FOXG1                 0.026   forkhead box G1 
MLL5                  0.026   myeloid/lymphoid or mixed-lineage leukemia 5 
MLL5                  0.026   myeloid/lymphoid or mixed-lineage leukemia 5 
BRD4                  0.026   bromodomain-containing protein 4 isoform long 
SYNPO                 0.026   synaptopodin isoform A 
DIAPH1                0.026   diaphanous 1 isoform 2 
DIAPH1                0.026   diaphanous 1 isoform 1 
RANBP9                0.026   RAN binding protein 9 
EMILIN2               0.026   elastin microfibril interfacer 2 
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.024   mitogen-activated protein kinase 7 isoform 2 
KLHDC7B               0.024   kelch domain containing 7B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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