Guide to the Human Genome
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Name: VKORC1 Sequence: fasta or formatted (163aa) NCBI GI: 13124770
Description:

vitamin K epoxide reductase complex, subunit 1 isoform 1

Referenced in:

Vitamin Pathways, Coenzymes, and 1-Carbon Metabolism

Other entries for this name:
alt prot [92aa] vitamin K epoxide reductase complex, subunit 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         12           2
 C cysteine            4.3          7           1
 D aspartate           3.1          5           1
 E glutamate           1.2          2           1
 F phenylalanine       4.9          8           2
 G glycine             8.0         13           1
 H histidine           1.8          3           1
 I isoleucine          4.9          8           1
 K lysine              2.5          4           1
 L leucine            16.0         26           3
 M methionine          1.8          3           1
 N asparagine          1.8          3           1
 P proline             1.2          2           1
 Q glutamine           3.1          5           1
 R arginine            7.4         12           1
 S serine             10.4         17           2
 T threonine           4.3          7           2
 V valine              8.6         14           1
 W tryptophan          3.7          6           1
 Y tyrosine            3.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   vitamin K epoxide reductase complex, subunit 1 isofo... 
VKORC1L1              0.443   vitamin K epoxide reductase complex, subunit 1-like ...
VKORC1                0.311   vitamin K epoxide reductase complex, subunit 1 isofo...
LOC100128471          0.013   PREDICTED: hypothetical protein 
LOC100128471          0.013   PREDICTED: hypothetical protein 
LOC100128471          0.013   PREDICTED: hypothetical protein 
SLC2A10               0.010   solute carrier family 2 member 10 
ATG9B                 0.010   ATG9 autophagy related 9 homolog B 
LOC100292795          0.006   PREDICTED: hypothetical protein 
LOC100291434          0.006   PREDICTED: hypothetical protein XP_002348262 
LOC100287788          0.006   PREDICTED: hypothetical protein XP_002342253 
TAS1R3                0.006   taste receptor, type 1, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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