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Search of human proteins with 131889391
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|131889391 hypothetical protein LOC55216 isoform a [Homo
sapiens]
(293 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|131889432 hypothetical protein LOC55216 isoform a [Homo sapiens] 591 e-169
gi|131889391 hypothetical protein LOC55216 isoform a [Homo sapiens] 591 e-169
gi|131888281 hypothetical protein LOC55216 isoform b [Homo sapiens] 585 e-167
gi|168229156 NFKB activating protein [Homo sapiens] 74 1e-13
gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1... 70 2e-12
gi|27734775 hypothetical protein LOC286499 [Homo sapiens] 66 4e-11
gi|56090620 NFKB activating protein-like [Homo sapiens] 65 5e-11
gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens] 61 1e-09
gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens] 61 1e-09
gi|4557509 cylicin 2 [Homo sapiens] 57 1e-08
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 55 6e-08
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 55 1e-07
gi|151301228 formin binding protein 3 [Homo sapiens] 54 1e-07
gi|40068059 CBF1 interacting corepressor [Homo sapiens] 54 2e-07
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 54 2e-07
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 54 2e-07
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 54 2e-07
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 53 3e-07
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 53 3e-07
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 53 4e-07
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 53 4e-07
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 52 5e-07
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 52 8e-07
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 52 8e-07
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 51 1e-06
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 51 1e-06
gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo s... 51 1e-06
gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens] 51 1e-06
gi|104526627 triadin [Homo sapiens] 51 1e-06
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 51 1e-06
>gi|131889432 hypothetical protein LOC55216 isoform a [Homo sapiens]
Length = 293
Score = 591 bits (1523), Expect = e-169
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR
Sbjct: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
Query: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE
Sbjct: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
Query: 121 FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI
Sbjct: 121 FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
Query: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE
Sbjct: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
Query: 241 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD
Sbjct: 241 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
>gi|131889391 hypothetical protein LOC55216 isoform a [Homo sapiens]
Length = 293
Score = 591 bits (1523), Expect = e-169
Identities = 293/293 (100%), Positives = 293/293 (100%)
Query: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR
Sbjct: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
Query: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE
Sbjct: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
Query: 121 FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI
Sbjct: 121 FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
Query: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE
Sbjct: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
Query: 241 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD
Sbjct: 241 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
>gi|131888281 hypothetical protein LOC55216 isoform b [Homo sapiens]
Length = 292
Score = 585 bits (1507), Expect = e-167
Identities = 292/293 (99%), Positives = 292/293 (99%), Gaps = 1/293 (0%)
Query: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR
Sbjct: 1 MSRIPLGKVLLRNVIRHTDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMR 60
Query: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE
Sbjct: 61 SDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEE 120
Query: 121 FETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
FETDS DQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI
Sbjct: 121 FETDS-DQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 179
Query: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE
Sbjct: 180 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 239
Query: 241 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD
Sbjct: 240 ESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 292
>gi|168229156 NFKB activating protein [Homo sapiens]
Length = 415
Score = 74.3 bits (181), Expect = 1e-13
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 24/227 (10%)
Query: 43 AYRGTKRKMLPSSSSRMRSDGFDEESQRYYW----------RPKNEISGTLEDDFLKAKS 92
+YR R S R F S Y+ +P + ++ L+ K
Sbjct: 71 SYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPSLLDKEREESLRQKR 130
Query: 93 WNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHK 152
+++ E P+ WG L P+ E DS + + + + +ST E K K
Sbjct: 131 LSERERIGELGAPEVWG------LSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEEEKKK 184
Query: 153 KSKKSH---KKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKK 209
KS +S KK++KK+S K++ K E +D +DS ++ S+E +K K+ K+KK
Sbjct: 185 KSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEKKKKH 244
Query: 210 SRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKRE 256
KK KK ++ + S DS+S S+E + K + K E
Sbjct: 245 RSKKYKKK-----RSKKSRKESSDSSSKESQEEFLENPWKDRTKAEE 286
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 122 ETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
ETDSSD+ + KK + K H S+K+KK K+ KKS+KE++D +
Sbjct: 220 ETDSSDEDNKRRAKKAKKKEKKKKHRSKKYKK--------------KRSKKSRKESSDSS 265
Query: 182 ADSSSEFSEETGASGTRKGKQP 203
+ S E E K ++P
Sbjct: 266 SKESQEEFLENPWKDRTKAEEP 287
Score = 35.0 bits (79), Expect = 0.078
Identities = 32/166 (19%), Positives = 65/166 (39%), Gaps = 17/166 (10%)
Query: 145 THESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSS----EFSEETGASGTRKG 200
TH+ + ++ + + RS +++ S + SSS +S G+
Sbjct: 57 THQLGGLSQGSRNQSYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPS 116
Query: 201 KQPHKRKKKSRKKSLKK---------PALFLEAESNTSHSDDSASSSSEESEERDTKKTK 251
+R++ R+K L + P ++ + N D + +E ++ T
Sbjct: 117 LLDKEREESLRQKRLSERERIGELGAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSAS 176
Query: 252 RKKREKKAHTSVANNEIQER----TNKRTNWKVATDERSAESSEDD 293
+ EKK +S + ++R ++KR + K + D S SE D
Sbjct: 177 TSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETD 222
>gi|117935038 cylicin, basic protein of sperm head cytoskeleton 1
[Homo sapiens]
Length = 651
Score = 70.5 bits (171), Expect = 2e-12
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 9/183 (4%)
Query: 117 YPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKK---SKKSHKKKQKKRSHKKQKKS 173
YPE +T+S D +D N + + + + + KK S S + + K S K +KK
Sbjct: 366 YPESTDTESGDAKDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKD 425
Query: 174 KKEATDITADSSSEFSEETGASG-----TRKGKQPHKRKKKSRKKSLKKPALFLEAESNT 228
KK++ S E T A ++KGK+ K+ KK KK KK AES
Sbjct: 426 KKDSKTDNKKSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTE 485
Query: 229 SHSDDSASSSSEES-EERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSA 287
SD + S E++ +KK +K K ++ A + +T +T+ K+ + +
Sbjct: 486 MESDLELKKDKKHSKEKKGSKKDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTES 545
Query: 288 ESS 290
E S
Sbjct: 546 EES 548
Score = 52.0 bits (123), Expect = 6e-07
Identities = 45/169 (26%), Positives = 74/169 (43%), Gaps = 19/169 (11%)
Query: 133 NGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEET 192
N KK+S + + +S+ KK K KK KK KK K E+TD + S + ++T
Sbjct: 291 NAKKSSD---AESEDSKDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDT 347
Query: 193 GASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKR 252
K K KK +KK KK + ES + + S + +++ + D KK
Sbjct: 348 K-------KDKKKLKKDDKKKDTKKYPESTDTESGDAKDARNDSRNLKKASKNDDKKKDA 400
Query: 253 KK--------REKKAHTSVANNEIQERTNKRTNWK-VATDERSAESSED 292
KK E ++ S + + ++ +K N K V DE S ++ +
Sbjct: 401 KKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKNDEESTDADSE 449
Score = 51.2 bits (121), Expect = 1e-06
Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 18/259 (6%)
Query: 32 KIRELEKQME--DAYRGT---KRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLED- 85
K ++++K E DA G +RK +++ D +++++Y E SG +D
Sbjct: 322 KKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTDTE-SGDAKDA 380
Query: 86 --DFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSS-DQQDI-TNGKKTSPQV 141
D K +K + + EL +E + D D++D T+ KK+
Sbjct: 381 RNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKESQKDEKKDKKDSKTDNKKSVKND 440
Query: 142 KSSTH---ESRKHKKSKKSHKKKQKKRSHK--KQKKSKKEATDITADSSSEFSEETGASG 196
+ ST E + K K +KK KK S K K+K +KK A +S E ++ S
Sbjct: 441 EESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKDAKKNAESTEMESDLELKKDKKHSK 500
Query: 197 TRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKRE 256
+KG + KK +RK + A F E+ + S ESEE K +KK +
Sbjct: 501 EKKGSK-KDIKKDARKDTESTDAEFDESSKTGFKTSTKIKGSDTESEESLYKPGAKKKID 559
Query: 257 KKAHTSVANNEIQERTNKR 275
+ TS AN++++ +KR
Sbjct: 560 ESDGTS-ANSKMEGLESKR 577
Score = 48.1 bits (113), Expect = 9e-06
Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 16/162 (9%)
Query: 135 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 194
KK + + + +S+ +K K KKK KK KK K E+TD +E A
Sbjct: 327 KKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDTKKYPESTD---------TESGDA 377
Query: 195 SGTRKGKQPHKRKKKS--RKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKR 252
R + K+ K+ +KK KK ++ES + S E+ +++D+K +
Sbjct: 378 KDARNDSRNLKKASKNDDKKKDAKKITFSTDSESELESKE---SQKDEKKDKKDSKTDNK 434
Query: 253 KKREKKAHTSVANNEIQ--ERTNKRTNWKVATDERSAESSED 292
K + ++ A++E + + K+ K D + + +D
Sbjct: 435 KSVKNDEESTDADSEPKGDSKKGKKDEKKGKKDSKKDDKKKD 476
Score = 45.1 bits (105), Expect = 8e-05
Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 20/210 (9%)
Query: 91 KSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKS------- 143
+S N K + D+ K+ E T ++ ++D+ K ++ +
Sbjct: 184 ESQNSKTVSKNCSQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSL 243
Query: 144 ----------STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETG 193
S ES +++ + K K K K+ T A SS+ E
Sbjct: 244 NVDFLMLVGQSDDESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDS 303
Query: 194 ASGTRKGKQPHKR-KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKR 252
+ K+ K KK +KK +KK +AES S + + ++ ++D KK
Sbjct: 304 KDAKKDSKKVKKNVKKDDKKKDVKKDTESTDAESGDSKDERKDTKKDKKKLKKDDKKKDT 363
Query: 253 KKREKKAHTSVANNEIQERTNKRTNWKVAT 282
KK + T + + ++ N N K A+
Sbjct: 364 KKYPES--TDTESGDAKDARNDSRNLKKAS 391
Score = 34.3 bits (77), Expect = 0.13
Identities = 47/254 (18%), Positives = 92/254 (36%), Gaps = 45/254 (17%)
Query: 83 LEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKK------ 136
+ F K W + P R ++ L E++ S D++ T KK
Sbjct: 77 IRHSFRKILQWPPIYTAAREQTPFRHLYTSKTHLKKAEYKK-SKDEKGGTPLKKDSKKKG 135
Query: 137 ----TSPQVKSSTHESRKHKKS------KKSHKKKQKKRSHKKQKKSKKEATDITADSSS 186
T+P+ K E K + K SH+ +Q K+S + + + T +
Sbjct: 136 GSYATNPESKQIVEEKTKRQNEADKTPLKSSHENEQSKKSKSSSETNPESQNSKTVSKNC 195
Query: 187 EFSEETGASGTRKGKQPHKRKKKSRKKSLKK------PALFLEAESN--------TSHSD 232
++ + ++K K + KK LK+ P + +E++ SD
Sbjct: 196 SQKDKKDSKNSKKTNTEFLHTKNNPKKDLKRSKTSNDPISEICSENSLNVDFLMLVGQSD 255
Query: 233 DSA--------SSSSEESEERDTKKTKRKKREKKAHTSVANNEIQE------RTNKRTNW 278
D + + S S+ K TK K++ K + +++ E + +K+
Sbjct: 256 DESINFDAWLRNYSQNNSKNYSLKYTKYTKKDTKKNAKKSSDAESEDSKDAKKDSKKVKK 315
Query: 279 KVATDERSAESSED 292
V D++ + +D
Sbjct: 316 NVKKDDKKKDVKKD 329
>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
Length = 248
Score = 65.9 bits (159), Expect = 4e-11
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 69 QRYYWRPK---NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGH----SGYKELYPEEF 121
Q Y RP+ E+ LE+ K+ +K ++E M + W S K L E
Sbjct: 31 QDYLNRPRPTWEEVKKQLENK----KTGSKALAEFEEKMNENWKKELEKSREKLLSGNES 86
Query: 122 ETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
+ +++ K SS+ +S + +KKQ KR KK+ +S K + T
Sbjct: 87 SSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSST 146
Query: 182 ADSSSEFSE-----ETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSAS 236
+S SE E + T K K KK +K L E+ S + + +D +
Sbjct: 147 HESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQA 206
Query: 237 SSSEESEERDTKKTKRKKREKKAH 260
EER+ K K KK++KK H
Sbjct: 207 KKKRRCEEREQAKEKVKKKKKKQH 230
Score = 56.6 bits (135), Expect = 3e-08
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 16/146 (10%)
Query: 147 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKR 206
E +K ++KK+ K + K + KKE E S E SG + +R
Sbjct: 43 EVKKQLENKKTGSKALAEFEEKMNENWKKEL---------EKSREKLLSGNESSSKKRER 93
Query: 207 KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANN 266
KKK +KKS + + S++S SD S+SSS E EE+ K ++KK+ + +S ++
Sbjct: 94 KKKRKKKSCR-------SSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSST 146
Query: 267 EIQERTNKRTNWKVATDERSAESSED 292
E +K + K + E +D
Sbjct: 147 HESESESKESVKKKKKSKDETEKEKD 172
Score = 46.6 bits (109), Expect = 3e-05
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 140 QVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRK 199
+++ S + +S ++++KKR K + S ++ ++ SSS+ +E G R+
Sbjct: 72 ELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRR 131
Query: 200 GKQPH---------------------KRKKKSRKKSLK-KPALFLEAESNTSHSDD---S 234
K+ + K+KKKS+ ++ K K L + S+ DD S
Sbjct: 132 KKKKNRSYKSSQSSTHESESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLS 191
Query: 235 ASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 290
+ SSSE E D + K+++ E++ + +++ +K+ + K S+ S
Sbjct: 192 SESSSESDYEEDVQAKKKRRCEEREQAKEKVKKKKKKQHKKHSKKKKKKSGSSHKS 247
Score = 42.4 bits (98), Expect = 5e-04
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 34/205 (16%)
Query: 35 ELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDE-ESQRYYWRPKNEISGTLEDDFLKAKSW 93
E++KQ+E+ G+K L +M + E E R NE S + + K
Sbjct: 43 EVKKQLENKKTGSKA--LAEFEEKMNENWKKELEKSREKLLSGNESSSKKRE---RKKKR 97
Query: 94 NKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHES----- 148
KK ++ S + EE + ++ K+S +SSTHES
Sbjct: 98 KKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSS---QSSTHESESESK 154
Query: 149 ---RKHKKSKKSHKKKQKKRS-HKKQKKSKKEATDITADSSSE--FSEETGASGTR---- 198
+K KKSK +K++ RS KK+KKS + ++++SSSE + E+ A R
Sbjct: 155 ESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKKKRRCEE 214
Query: 199 ----------KGKQPHKRKKKSRKK 213
K K+ HK+ K +KK
Sbjct: 215 REQAKEKVKKKKKKQHKKHSKKKKK 239
Score = 35.8 bits (81), Expect = 0.046
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEI-------SGTLE 84
K RE +K+ + + S SS SD DEE ++ R K + S T E
Sbjct: 89 KKRERKKKRKKKSCRSSSSSSSSDSSSSSSDSEDEEKKQGKRRKKKKNRSYKSSQSSTHE 148
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHS---GYKELYPE------EFETDSSDQQDITNGK 135
+ +S KK + ++ S K+ YP+ E ++S ++D+ K
Sbjct: 149 SESESKESVKKKKKSKDETEKEKDVRSLSKKRKKSYPDDKPLSSESSSESDYEEDVQAKK 208
Query: 136 KTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHK--KQKKSK 174
K + + E K KK KK HKK KK+ K KS+
Sbjct: 209 KRRCEEREQAKEKVK-KKKKKQHKKHSKKKKKKSGSSHKSR 248
>gi|56090620 NFKB activating protein-like [Homo sapiens]
Length = 402
Score = 65.5 bits (158), Expect = 5e-11
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 101 EANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKK 160
E P+ WG S + T D++++T+ K +S S S +H+K K S +
Sbjct: 130 ELGAPEVWGPSPKFPQLDSDEHTPVEDEEEVTHQKSSS-----SDSNSEEHRKKKTSRSR 184
Query: 161 KQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPAL 220
+KKR +K K+ ++ +D +DS+SE + + +K + K+KKK + K+ KK
Sbjct: 185 NKKKRKNKSSKRKHRKYSD--SDSNSESDTNSDSDDDKKRVKAKKKKKKKKHKTKKKKNK 242
Query: 221 FLEAESNTSHSDDSASSSSE 240
+ ES+ S DS SE
Sbjct: 243 KTKKESSDSSCKDSEEDLSE 262
Score = 48.9 bits (115), Expect = 5e-06
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 28/163 (17%)
Query: 142 KSSTHESRKHKKSKK------------SHKKKQKKRSHKKQKKSKKEATDITADSSSEFS 189
K +H R+ K+ ++ S K Q + ++E T + SS S
Sbjct: 113 KEESHRQRRLKERERIGELGAPEVWGPSPKFPQLDSDEHTPVEDEEEVTHQKSSSSDSNS 172
Query: 190 EETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKK 249
EE T + + KRK KS K+ +K + +++SN S+ +S S++ ++R K
Sbjct: 173 EEHRKKKTSRSRNKKKRKNKSSKRKHRK---YSDSDSN---SESDTNSDSDDDKKR--VK 224
Query: 250 TKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
K+KK++KK T +++ NK+T K ++D +S ED
Sbjct: 225 AKKKKKKKKHKT-------KKKKNKKTK-KESSDSSCKDSEED 259
Score = 33.1 bits (74), Expect = 0.30
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 22/123 (17%)
Query: 188 FSEETGASGTRKGKQPHKR---KKKSRKKSLKKPALF--------LEAESNTSHSDDS-- 234
++EE ++ + ++ H++ K++ R L P ++ L+++ +T D+
Sbjct: 101 YAEERQSAEDYEKEESHRQRRLKERERIGELGAPEVWGPSPKFPQLDSDEHTPVEDEEEV 160
Query: 235 ----ASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 290
+SSS SEE KKT R + +KK N+ +R +++ + + E S
Sbjct: 161 THQKSSSSDSNSEEHRKKKTSRSRNKKKR-----KNKSSKRKHRKYSDSDSNSESDTNSD 215
Query: 291 EDD 293
DD
Sbjct: 216 SDD 218
>gi|91206454 hypothetical protein LOC257415 isoform 2 [Homo sapiens]
Length = 237
Score = 61.2 bits (147), Expect = 1e-09
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 69 QRYYWRPK---NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHS--GYKELYPEEFET 123
Q Y RP+ E+ LE K K +K ++E M + W ++E E+
Sbjct: 21 QDYLNRPRPTWEEVKEQLE----KKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSES 76
Query: 124 DSSDQQDITNGKK----------TSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKS 173
S +Q KK +S SS+ +S K + +KK+K RSHK + S
Sbjct: 77 SSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESS 136
Query: 174 KKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDD 233
E + DS + ++ GT K K KK + S KP L E+ S + + ++
Sbjct: 137 MSETESDSKDSLKK--KKKSKDGTEKEKDIKGLSKKRKMYSEDKP-LSSESLSESEYIEE 193
Query: 234 SASSSSEESEERD--TKKTKRKK--------REKKAHTS 262
+ + SEER+ T+KTK+KK ++KKA +S
Sbjct: 194 VRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASS 232
Score = 51.2 bits (121), Expect = 1e-06
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 147 ESRKHKKSKKS-HKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 205
E KH++ S + KKR KK++K K ++ SSS+ S + S KQ +
Sbjct: 62 ELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKR 121
Query: 206 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE-ERDTKKTKRKKR---EKKAHT 261
RKKK + + E ES++ S S + +E E+D K +K++ E K +
Sbjct: 122 RKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLS 181
Query: 262 SVANNEIQERTNKRTNWKVATDER 285
S + +E + R K +++ER
Sbjct: 182 SESLSESEYIEEVRAKKKKSSEER 205
Score = 50.8 bits (120), Expect = 1e-06
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 135 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 194
+ + P ++ + R + K +K+KK S K +E + E E
Sbjct: 14 QSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGS--KALAEFEEKMNENWKKELEKHREKLL 71
Query: 195 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 254
SG+ + +RKKK +KKS + + S++S SD S+SSS E E++ K +RKK
Sbjct: 72 SGSESSSKKRQRKKKEKKKSGRY------SSSSSSSSDSSSSSSDSEDEDKKQGK-RRKK 124
Query: 255 REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
++ ++H S ++ + ++ + + K + E D
Sbjct: 125 KKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKD 163
Score = 34.7 bits (78), Expect = 0.10
Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 21/200 (10%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
++ ++ WK +ELEK E G++ SS R R ++S RY S +
Sbjct: 53 EKMNENWK-KELEKHREKLLSGSES----SSKKRQRKKKEKKKSGRY------SSSSSSS 101
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSS 144
D + S ++ + + + +K ET+S + + KK+ K
Sbjct: 102 SDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKS----KDG 157
Query: 145 THESRKHKKSKKSHKKKQKKRSHKKQKKSKKE-ATDITADSSSEFSEETGASGTRKGKQP 203
T + + K K K + + + S+ E ++ A E A+ K K+
Sbjct: 158 TEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKK 217
Query: 204 HKR-----KKKSRKKSLKKP 218
HK+ KKK+ S P
Sbjct: 218 HKKHSKKKKKKAASSSPDSP 237
>gi|91206456 hypothetical protein LOC257415 isoform 1 [Homo sapiens]
Length = 247
Score = 61.2 bits (147), Expect = 1e-09
Identities = 61/219 (27%), Positives = 96/219 (43%), Gaps = 32/219 (14%)
Query: 69 QRYYWRPK---NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHS--GYKELYPEEFET 123
Q Y RP+ E+ LE K K +K ++E M + W ++E E+
Sbjct: 31 QDYLNRPRPTWEEVKEQLE----KKKKGSKALAEFEEKMNENWKKELEKHREKLLSGSES 86
Query: 124 DSSDQQDITNGKK----------TSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKS 173
S +Q KK +S SS+ +S K + +KK+K RSHK + S
Sbjct: 87 SSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESS 146
Query: 174 KKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDD 233
E + DS + ++ GT K K KK + S KP L E+ S + + ++
Sbjct: 147 MSETESDSKDSLKK--KKKSKDGTEKEKDIKGLSKKRKMYSEDKP-LSSESLSESEYIEE 203
Query: 234 SASSSSEESEERD--TKKTKRKK--------REKKAHTS 262
+ + SEER+ T+KTK+KK ++KKA +S
Sbjct: 204 VRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASS 242
Score = 51.2 bits (121), Expect = 1e-06
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 147 ESRKHKKSKKS-HKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHK 205
E KH++ S + KKR KK++K K ++ SSS+ S + S KQ +
Sbjct: 72 ELEKHREKLLSGSESSSKKRQRKKKEKKKSGRYSSSSSSSSDSSSSSSDSEDEDKKQGKR 131
Query: 206 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE-ERDTKKTKRKKR---EKKAHT 261
RKKK + + E ES++ S S + +E E+D K +K++ E K +
Sbjct: 132 RKKKKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKDIKGLSKKRKMYSEDKPLS 191
Query: 262 SVANNEIQERTNKRTNWKVATDER 285
S + +E + R K +++ER
Sbjct: 192 SESLSESEYIEEVRAKKKKSSEER 215
Score = 50.8 bits (120), Expect = 1e-06
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 9/159 (5%)
Query: 135 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 194
+ + P ++ + R + K +K+KK S K +E + E E
Sbjct: 24 QSSGPTIQDYLNRPRPTWEEVKEQLEKKKKGS--KALAEFEEKMNENWKKELEKHREKLL 81
Query: 195 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 254
SG+ + +RKKK +KKS + + S++S SD S+SSS E E++ K +RKK
Sbjct: 82 SGSESSSKKRQRKKKEKKKSGRY------SSSSSSSSDSSSSSSDSEDEDKKQGK-RRKK 134
Query: 255 REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
++ ++H S ++ + ++ + + K + E D
Sbjct: 135 KKNRSHKSSESSMSETESDSKDSLKKKKKSKDGTEKEKD 173
Score = 34.7 bits (78), Expect = 0.10
Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 21/200 (10%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
++ ++ WK +ELEK E G++ SS R R ++S RY S +
Sbjct: 63 EKMNENWK-KELEKHREKLLSGSES----SSKKRQRKKKEKKKSGRY------SSSSSSS 111
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSS 144
D + S ++ + + + +K ET+S + + KK+ K
Sbjct: 112 SDSSSSSSDSEDEDKKQGKRRKKKKNRSHKSSESSMSETESDSKDSLKKKKKS----KDG 167
Query: 145 THESRKHKKSKKSHKKKQKKRSHKKQKKSKKE-ATDITADSSSEFSEETGASGTRKGKQP 203
T + + K K K + + + S+ E ++ A E A+ K K+
Sbjct: 168 TEKEKDIKGLSKKRKMYSEDKPLSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKK 227
Query: 204 HKR-----KKKSRKKSLKKP 218
HK+ KKK+ S P
Sbjct: 228 HKKHSKKKKKKAASSSPDSP 247
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 57.4 bits (137), Expect = 1e-08
Identities = 45/150 (30%), Positives = 65/150 (43%), Gaps = 20/150 (13%)
Query: 123 TDSSDQQ-----DITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEA 177
T+S D++ D KK S + K S ES + +K +K K+ K KK K A
Sbjct: 176 TESEDEKGGAKKDNKKDKKDSNKGKDSATES----EGEKGGTEKDSKKGKKDSKKGKDSA 231
Query: 178 TDITADSSSEFSEETGASGTRKGKQPHKRKK-----KSRKKSLKKPALFLEAESNTSHSD 232
++ A + E +E G KG + KK K KK KKP+ S S S
Sbjct: 232 IELQAVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPS------STDSDSK 285
Query: 233 DSASSSSEESEERDTKKTKRKKREKKAHTS 262
D S++ +D KK +K EK++ S
Sbjct: 286 DDVKKESKKDATKDAKKVAKKDTEKESADS 315
Score = 55.5 bits (132), Expect = 6e-08
Identities = 44/181 (24%), Positives = 88/181 (48%), Gaps = 14/181 (7%)
Query: 124 DSSDQQDITNGKKTSPQVKSSTHESRK--HKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
DS +DI GK+ K + + +K K + + + +K KK K K+ ++
Sbjct: 140 DSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATESEDEKGGAKKDNKKDKKDSNKG 199
Query: 182 ADSSSEFSEETGASGTRK-GKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
DS++E E G GT K K+ K KK + +++ A+ + + + D+
Sbjct: 200 KDSATESEGEKG--GTEKDSKKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDANKGDES 257
Query: 241 ESEERDTKKTKRKKREKKAHTSV---ANNEIQERTNK---RTNWKVA---TDERSAESSE 291
+ ++D K+ K+ K++KK +S + +++++ + K + KVA T++ SA+S +
Sbjct: 258 KDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKK 317
Query: 292 D 292
D
Sbjct: 318 D 318
Score = 47.0 bits (110), Expect = 2e-05
Identities = 59/251 (23%), Positives = 100/251 (39%), Gaps = 40/251 (15%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAK 91
K E+ K+ ED T +K S S ++ D + + + K E +D K K
Sbjct: 110 KAAEIGKKGEDK---TTQKDTTDSESELKQGKKDSKKGKDIEKGKEEKLDAKKDS-KKGK 165
Query: 92 SWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKH 151
+K D D G G K+ + D++D GK ++ + + + K
Sbjct: 166 KDAEKGKDSATESEDEKG--GAKK-------DNKKDKKDSNKGKDSATESEGEKGGTEKD 216
Query: 152 KKSKKSHKKKQK---------KRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQ 202
K K KK K K KK + KK+A D S + ++ A +KGK+
Sbjct: 217 SKKGKKDSKKGKDSAIELQAVKADEKKDEDGKKDAN--KGDESKDAKKD--AKEIKKGKK 272
Query: 203 PHKR------------KKKSRKKSLK--KPALFLEAESNTSHSDDSASSSSEESEERDTK 248
K+ KK+S+K + K K + E ++ S A ++++ ++D K
Sbjct: 273 DKKKPSSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAK 332
Query: 249 KTKRKKREKKA 259
K +K +K A
Sbjct: 333 KNAKKDEKKDA 343
Score = 46.6 bits (109), Expect = 3e-05
Identities = 48/245 (19%), Positives = 100/245 (40%), Gaps = 34/245 (13%)
Query: 18 TDAHNKIQE-ESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPK 76
TD+ +++++ + D K +++EK E+ K + D E +
Sbjct: 128 TDSESELKQGKKDSKKGKDIEKGKEEKLDAKKDSKKGKKDAEKGKDSATES--------E 179
Query: 77 NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKK 136
+E G +D+ K NK + + + G G E + ++D GK
Sbjct: 180 DEKGGAKKDNKKDKKDSNKG----KDSATESEGEKGGTE------KDSKKGKKDSKKGKD 229
Query: 137 TSPQVKSSTHESRKHKKSKKSHKK-------KQKKRSHKKQKKSKKEATDITADSSSEFS 189
++ ++++ + +K + KK K K+ + KK KK KK+ + +DS +
Sbjct: 230 SAIELQAVKADEKKDEDGKKDANKGDESKDAKKDAKEIKKGKKDKKKPSSTDSDSKDDVK 289
Query: 190 EETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKK 249
+E+ T+ K+ K+ + KK A ++ A ++++ ++D KK
Sbjct: 290 KESKKDATKDAKKVAKKDTEKESADSKKDA--------KKNAKKDAKKDAKKNAKKDEKK 341
Query: 250 TKRKK 254
+KK
Sbjct: 342 DAKKK 346
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 55.5 bits (132), Expect = 6e-08
Identities = 35/173 (20%), Positives = 76/173 (43%), Gaps = 3/173 (1%)
Query: 122 ETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
E +S +++ +K + + R K+ K KK++++R ++++K KE +
Sbjct: 54 ERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKE 113
Query: 182 ADSSSEFSEE--TGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS 239
E E T G + ++ +++++ +++ KK E E +
Sbjct: 114 KRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGE 173
Query: 240 EESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
+E E ++ ++ +RKKRE+ E +ER ++ K +ER E +D
Sbjct: 174 KEEERKEKERKERKKRERNRKERKKERERKERRERKKERK-KKEERKKERQKD 225
Score = 53.5 bits (127), Expect = 2e-07
Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 53/248 (21%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAK 91
+IRE E+++E G K + ES+R R + E K K
Sbjct: 37 EIREREREIETRKEGKKER----------------ESERKKERRERE----------KRK 70
Query: 92 SWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKH 151
+K E ++ G +E E + ++++ +K + K R
Sbjct: 71 REREKERKRERGKKEKKGERKKEE---RERKKRRREKENKEGEEKEKRKKKEKKERGRTS 127
Query: 152 KKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSR 211
K+ K+ +K+++KR +K+++ KKE + E E + G++ +RK+K R
Sbjct: 128 KEGKERERKEERKREERKERERKKEERE----KERERKERKKRERKQVGEKEEERKEKER 183
Query: 212 KKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQER 271
K+ K+ + E E R+ KK ++KK E+K + +
Sbjct: 184 KERKKR-----------ERNRKERKKERERKERRERKKERKKKEERKK---------ERQ 223
Query: 272 TNKRTNWK 279
+++TNW+
Sbjct: 224 KDRQTNWR 231
Score = 52.0 bits (123), Expect = 6e-07
Identities = 33/155 (21%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Query: 140 QVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKK---SKKEATDITADSSSEFSEETGASG 196
+ + + R+ ++ K+ +++++KR +K++K KKE E +
Sbjct: 46 ETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKE 105
Query: 197 TRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKRE 256
++G++ KRKKK +K+ + E E + + EER+ K+ +RK+R+
Sbjct: 106 NKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEERE-KERERKERK 164
Query: 257 KKAHTSVANNEIQERTNKRTNWKVATDERSAESSE 291
K+ V E + + +R K R E
Sbjct: 165 KRERKQVGEKEEERKEKERKERKKRERNRKERKKE 199
Score = 49.7 bits (117), Expect = 3e-06
Identities = 34/168 (20%), Positives = 75/168 (44%), Gaps = 5/168 (2%)
Query: 128 QQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSH-KKQKKSKKEATDITADSSS 186
+++I K+ + +S + R+ ++ +K ++K++KR KK+KK +++ + +
Sbjct: 42 EREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKKEE--RERKK 99
Query: 187 EFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 246
E+ G K K+ K KK+ + S + + E + E +ER+
Sbjct: 100 RRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERE 159
Query: 247 TKKTKRKKREK--KAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
K+ K+++R++ + E +ER + N K ER + +
Sbjct: 160 RKERKKRERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRE 207
Score = 49.7 bits (117), Expect = 3e-06
Identities = 33/175 (18%), Positives = 70/175 (40%), Gaps = 2/175 (1%)
Query: 119 EEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 178
E E + ++ K+ + + ++ ++ KK ++K+ K +K+K+ KKE
Sbjct: 62 ERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKK 121
Query: 179 DITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSS 238
+ S E R+ ++ +RKK+ R+K ++ ++
Sbjct: 122 ERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKE- 180
Query: 239 SEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
+E +ER ++ RK+R+K+ +ER K K +R E +
Sbjct: 181 -KERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKDRQTNWREKE 234
Score = 48.9 bits (115), Expect = 5e-06
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 137 TSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASG 196
T P +S E + +++K KK+++ K++++ +K + + E ++ G
Sbjct: 30 TQPGWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKE-KKG 88
Query: 197 TRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEER----DTKKTKR 252
RK K+ +RKK+ R+K K+ E E +S+E +ER + K+ +R
Sbjct: 89 ERK-KEERERKKRRREKENKEGE---EKEKRKKKEKKERGRTSKEGKERERKEERKREER 144
Query: 253 KKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSE 291
K+RE+K E +ER KR +V E + E
Sbjct: 145 KERERKKEEREKERERKER-KKRERKQVGEKEEERKEKE 182
Score = 47.4 bits (111), Expect = 2e-05
Identities = 30/147 (20%), Positives = 63/147 (42%), Gaps = 20/147 (13%)
Query: 147 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKR 206
ES + K+ ++ K+K+++ +K+++ KKE E + ++G++ KR
Sbjct: 56 ESERKKERREREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKENKEGEEKEKR 115
Query: 207 KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANN 266
KKK +K E + + + EER ++ K+++REK+
Sbjct: 116 KKKEKK----------ERGRTSKEGKERERKEERKREERKERERKKEEREKE-------- 157
Query: 267 EIQERTNKRTNWKVATDERSAESSEDD 293
+ER ++ + E+ E E +
Sbjct: 158 --RERKERKKRERKQVGEKEEERKEKE 182
Score = 39.3 bits (90), Expect = 0.004
Identities = 37/200 (18%), Positives = 79/200 (39%), Gaps = 5/200 (2%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKN 77
T K + ES+ K R E++ R +RK + +E ++ R K
Sbjct: 47 TRKEGKKERESERKKERR-EREKRKREREKERKRERGKKEKKGERKKEERERKKRRREKE 105
Query: 78 EISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKT 137
G ++ K + + E +R +E E + + +++ +K
Sbjct: 106 NKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKK 165
Query: 138 SPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGT 197
+ + E + +K +K KK+++ R +K+++ +KE + + + +
Sbjct: 166 RERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKD 225
Query: 198 R----KGKQPHKRKKKSRKK 213
R + K+ KR++K RKK
Sbjct: 226 RQTNWREKERGKRERKERKK 245
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 54.7 bits (130), Expect = 1e-07
Identities = 37/176 (21%), Positives = 74/176 (42%), Gaps = 1/176 (0%)
Query: 114 KELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKS 173
+E E E + ++ KK + + E ++ ++ K+ ++++K+R +K++K
Sbjct: 43 REKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKK 102
Query: 174 KKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDD 233
K+E + E K ++ KRKK+ +KK K+ E
Sbjct: 103 KRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKK 162
Query: 234 SASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAES 289
E+ ER+ +K ++K+RE+K +ER K+ K +R +S
Sbjct: 163 RKKEEREKKRERN-RKERKKERERKERRERKKERKKERRKKKERKKDRKTDRQTDS 217
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 24/147 (16%)
Query: 147 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKR 206
E RK KK KK ++KQ+ R +K+KK +KE R+ KQ +R
Sbjct: 93 ERRKRKKEKKKRERKQRGRRERKKKKERKERE-------------------RENKQRRER 133
Query: 207 KKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK-RKKREKKAHTSVAN 265
K+K R+K ++ E + + EER+ K+ + RK+R+K+
Sbjct: 134 KRKKRRKKKRRK----ERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERR 189
Query: 266 NEIQERTNKRTNWKVATDERSAESSED 292
+ER +R K +R + D
Sbjct: 190 ERKKERKKERRKKKERKKDRKTDRQTD 216
Score = 52.8 bits (125), Expect = 4e-07
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 136 KTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGAS 195
K Q +S + R+ ++ +K ++K++KR K++K K++ + + + E
Sbjct: 27 KPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQR 86
Query: 196 GTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKR 255
R+ K+ KRKK+ +K+ K+ + E + R+ K+ KR+K+
Sbjct: 87 KERREKERRKRKKEKKKRERKQ-----RGRRERKKKKERKERERENKQRRERKRKKRRKK 141
Query: 256 EKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
+++ E +R KR K E+ E + +
Sbjct: 142 KRRKERK-REKERGKRERKRKKRKKEEREKKRERNRKE 178
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/193 (20%), Positives = 75/193 (38%), Gaps = 14/193 (7%)
Query: 25 QEESDMWKIR-ELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTL 83
Q ES+ K R E EK+ + + KR+ + + +E +R + +
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERR 90
Query: 84 EDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKS 143
E + K K KK + +R KE E + ++ K+ + +
Sbjct: 91 EKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKRE 150
Query: 144 STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQP 203
R+ K+ K+ ++++KKR ++++ K+ E +K ++
Sbjct: 151 KERGKRERKRKKRKKEEREKKRERNRKERKKER-------------ERKERRERKKERKK 197
Query: 204 HKRKKKSRKKSLK 216
+RKKK RKK K
Sbjct: 198 ERRKKKERKKDRK 210
Score = 35.0 bits (79), Expect = 0.078
Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 4/145 (2%)
Query: 32 KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAK 91
K +E EKQ ++ +RK R R E ++ R + E + + K
Sbjct: 78 KRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKK 137
Query: 92 SWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKH 151
KK +R G +E ++ + + +++ N K+ + + RK
Sbjct: 138 RRKKKRRKERKREKER----GKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKK 193
Query: 152 KKSKKSHKKKQKKRSHKKQKKSKKE 176
++ K+ KKK++K+ K +++ +
Sbjct: 194 ERKKERRKKKERKKDRKTDRQTDSQ 218
Score = 30.8 bits (68), Expect = 1.5
Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 178 TDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASS 237
T++ S S S+ + + K+ +R+K+ R++ ++ + E +
Sbjct: 15 TELQMVSCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKE 74
Query: 238 SSEESEERD-TKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSE 291
+ +ER+ +K +R+K +K E ++R + K ER E+ +
Sbjct: 75 RERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQ 129
>gi|151301228 formin binding protein 3 [Homo sapiens]
Length = 930
Score = 54.3 bits (129), Expect = 1e-07
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 146 HESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSS----EFSEETGA---SGTR 198
HE + H K H KK KK H+K+ +S+ + DS S + SE A S +
Sbjct: 775 HECQHHHSKNKKHSKKSKKH-HRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSA 833
Query: 199 KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKK 258
+ ++ +K+ KK +KKS K+ H DS S +E +++ K + +K +
Sbjct: 834 ESERSYKKSKKHKKKSKKR-----------RHKSDSPESDAEREKDKKEKDRESEKDRTR 882
Query: 259 AHTSVANNEIQERTNKRT-NWKVATDERS 286
+ + +++T K + NW + E S
Sbjct: 883 QRSESKHKSPKKKTGKDSGNWDTSGSELS 911
Score = 54.3 bits (129), Expect = 1e-07
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 16/135 (11%)
Query: 147 ESRKH-KKSKKSHKKKQKKRS---------HKKQKKSKKEATDITADSSSEFSEETGASG 196
+++KH KKSKK H+K+ + RS H K+K+ + E+ + SSS SE +
Sbjct: 783 KNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERS---- 838
Query: 197 TRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSD-DSASSSSEESEERDTKKTKRKKR 255
K + HK+K K R+ P E E + D +S + + E K K+K
Sbjct: 839 -YKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTG 897
Query: 256 EKKAHTSVANNEIQE 270
+ + + +E+ E
Sbjct: 898 KDSGNWDTSGSELSE 912
Score = 44.7 bits (104), Expect = 1e-04
Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 39/245 (15%)
Query: 20 AHNKIQEESDMWKIRELEKQMEDAYRGTKRK------MLPSSSSRMRSDGFDEESQRYYW 73
A N + E+++ RE E++ E+A R KRK ML ++ + D E+ + +
Sbjct: 693 AFNSLLEKAEA---REREREKEEA-RKMKRKESAFKSMLKQAAPPIELDAVWEDIRERFV 748
Query: 74 RPKNEISGTLED-------DFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSS 126
+ TLE DF+ + + + + +++ +DS
Sbjct: 749 KEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSD 808
Query: 127 DQQDITNGKKTSPQVKSSTHES------RKHKKSKKSHKKKQKKRSHKKQKKSKKEATDI 180
D + K+ + +S++ S R +KKSKK HKKK KKR H K ++ +
Sbjct: 809 DDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKK-HKKKSKKRRH------KSDSPES 861
Query: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
A+ + E+ S + +Q + K KS KK K ++ + D S S SE
Sbjct: 862 DAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGK---------DSGNWDTSGSELSE 912
Query: 241 ESEER 245
E+
Sbjct: 913 GELEK 917
Score = 33.5 bits (75), Expect = 0.23
Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 38/173 (21%)
Query: 147 ESRKHKKSKKSHKKKQKK----RSHKKQKKSKKEATDITADSSSEFSEETG-----ASGT 197
E+R+ ++ K+ +K ++K +S KQ E + D F +E
Sbjct: 702 EAREREREKEEARKMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESE 761
Query: 198 RKG-------------KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEE 244
RK + H + KK KKS K H S S S +S++
Sbjct: 762 RKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKH------------HRKRSRSRSGSDSDD 809
Query: 245 RDTKKTKRKKREKKA----HTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
D+ K+++R + H+S A +E + +K+ K ++S E D
Sbjct: 810 DDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESD 862
Score = 33.5 bits (75), Expect = 0.23
Identities = 20/91 (21%), Positives = 37/91 (40%)
Query: 202 QPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHT 261
Q H K K K KK + S SDD S S ++ + +++ ++
Sbjct: 778 QHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESER 837
Query: 262 SVANNEIQERTNKRTNWKVATDERSAESSED 292
S ++ ++ +K+ K + E AE +D
Sbjct: 838 SYKKSKKHKKKSKKRRHKSDSPESDAEREKD 868
>gi|40068059 CBF1 interacting corepressor [Homo sapiens]
Length = 450
Score = 53.9 bits (128), Expect = 2e-07
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 129 QDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEF 188
+ +T +K K E +K KK +K K ++ + HKK K S ++ ++ SS+E
Sbjct: 214 KSLTTKQKQKLLRKLDRLEKKKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTET 273
Query: 189 SEETGAS-GTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDT 247
SE + S K K+ ++K+K K S + E + + SSS + E+
Sbjct: 274 SESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNREKAK 333
Query: 248 KKTKRKKREKKAHTSV---ANNEIQERTNKRTNWKVATDERSAES 289
+K + K E S ++++ + RT+K + K ++ + S
Sbjct: 334 EKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEGSS 378
Score = 45.4 bits (106), Expect = 6e-05
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 198 RKGKQPHKRKK--KSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKR 255
+K K+ K+KK KSR K K + + S++S S S SS ESE + +K ++K+
Sbjct: 234 KKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQRKK 293
Query: 256 EKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
KK S NN E +K K+ + S+ + +
Sbjct: 294 RKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNRE 330
Score = 42.0 bits (97), Expect = 6e-04
Identities = 37/177 (20%), Positives = 69/177 (38%), Gaps = 32/177 (18%)
Query: 123 TDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKR--------SHKKQKKSK 174
++SS + + N +K + K ++ H S K K KKR SH ++K+K
Sbjct: 274 SESSSESESNNKEKKIQRKKRKKNKCSGHNNSDSEEKDKSKKRKLHEELSSSHHNREKAK 333
Query: 175 KEATDITADSSSEFS------------------EETGASGTRKGKQPHKRKKKSRKKSLK 216
++ + +SS E S E+ G+ + H R+++SR+ +
Sbjct: 334 EKPRFLKHESSREDSKWSHSDSDKKSRTHKHSPEKRGSERKEGSSRSHGREERSRRSRSR 393
Query: 217 KPALFLEAESNTSHSDDSASSSSEESEER----DTKKTKRKKREKK--AHTSVANNE 267
P + + E+ + S ++ R D + ++ RE HT V E
Sbjct: 394 SPGSYKQRETRKRAQRNPGEEQSRRNDSRSHGTDLYRGEKMYREHPGGTHTKVTQRE 450
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 53.9 bits (128), Expect = 2e-07
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 168 KKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAE-- 225
KK+KK KKE + + + E EE G RK K+ KRK+K +KK K+ E E
Sbjct: 1 KKKKKKKKETEE--TEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEE 58
Query: 226 -----------SNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNK 274
++ EE EE + ++ +R+K++KK E +++ +
Sbjct: 59 EKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRR 118
Query: 275 RTNWK 279
+T K
Sbjct: 119 KTKKK 123
Score = 53.9 bits (128), Expect = 2e-07
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 20/141 (14%)
Query: 135 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 194
KK + T E+ + ++ ++ K+++KR K+++K KK+ T T
Sbjct: 3 KKKKKKETEETEETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETE------------ 50
Query: 195 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKK 254
RK K+ ++K+K ++K K E E ++ EE +E ++ K+KK
Sbjct: 51 --KRKEKEEEEKKRKRKRKKKK------EEEEREEEEEEEEEEKEEEEKEEGRRRKKKKK 102
Query: 255 REKKAHTSVANNEIQERTNKR 275
R +K + + +T K+
Sbjct: 103 RRRKEEEEEKKKKRRRKTKKK 123
Score = 53.9 bits (128), Expect = 2e-07
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 28/140 (20%)
Query: 119 EEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 178
E ET+ +++++ GK+ + K E K KK+K++ K+K+K+ KK+K+ +K+
Sbjct: 12 ETEETEETEEEEEKEGKRKEKR-KEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKK 70
Query: 179 DITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSS 238
+ + E EE + K+ +R+KK +K+ K+
Sbjct: 71 E--EEEREEEEEEEEEEKEEEEKEEGRRRKKKKKRRRKE--------------------- 107
Query: 239 SEESEERDTKKTKRKKREKK 258
EE + KK +R+K +KK
Sbjct: 108 ----EEEEKKKKRRRKTKKK 123
Score = 34.3 bits (77), Expect = 0.13
Identities = 17/88 (19%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 206 RKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVAN 265
+KKK +KK ++ E+ + ++ +E + K+ ++KK+ K+
Sbjct: 1 KKKKKKKKETEETE-----ETEETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEK 55
Query: 266 NEIQERTNKRTNWKVATDERSAESSEDD 293
E +++ ++ K +ER E E++
Sbjct: 56 EEEEKKRKRKRKKKKEEEEREEEEEEEE 83
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 53.9 bits (128), Expect = 2e-07
Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 9/177 (5%)
Query: 120 EFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 179
E +DSSD + + S ++ + S K + KS K + +K T
Sbjct: 360 ESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTR 419
Query: 180 ITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEA----ESNTSHSDDSA 235
SSSE EE+ +S K K K ++ K+ K AL L A + + S DS
Sbjct: 420 KADSSSSE--EESSSSEEEKTK---KMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSD 474
Query: 236 SSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
SSSSEE EE+ +K +KK +K A + + + K + ++ + S+E E+
Sbjct: 475 SSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEE 531
Score = 46.2 bits (108), Expect = 3e-05
Identities = 69/271 (25%), Positives = 106/271 (39%), Gaps = 45/271 (16%)
Query: 50 KMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFY----DYEANMP 105
K SSSS SD DEE Q+ K + ++ AK+ KK D +++
Sbjct: 122 KASESSSSEESSDDDDEEDQK-----KQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSE 176
Query: 106 DRWGHSGYKELYPEEFETDSSDQQD-------ITNGKKTSPQVKSSTHESRKHKKSKKSH 158
D + ++ P + + I NGK S SS+ S + +K+
Sbjct: 177 DEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANGKAASSSSSSSSSSSSDDSEEEKA- 235
Query: 159 KKKQKKRSHKKQKKSK---KEATDITADSSSEFSEETGASGTRKGKQPHKRKK------- 208
KK KKQ +K K AT T SSS SE++ + + K+P K K
Sbjct: 236 AATPKKTVPKKQVVAKAPVKAATTPTRKSSS--SEDSSSDEEEEQKKPMKNKPGPYSSVP 293
Query: 209 ----KSRKKSL--KKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTS 262
KKSL + P +E + S+DS+ S SEE TK +
Sbjct: 294 PPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTK----------A 343
Query: 263 VANNEIQERTNKRTNWKVATDERSAESSEDD 293
V + + + + ++D ++SSEDD
Sbjct: 344 VVSKATTKPPPAKKAAESSSDSSDSDSSEDD 374
Score = 45.4 bits (106), Expect = 6e-05
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 15/174 (8%)
Query: 128 QQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSE 187
QQ + + + +S + SS+ E +K K K KK +S +++D +DSS +
Sbjct: 316 QQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSD--SDSSED 373
Query: 188 FSEETGASGTRKG---------KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSS 238
+ +GT K K P + + K+ + L ++++S S++ +SSS
Sbjct: 374 DEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSS 433
Query: 239 SEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
EE ++ TK K K A + A Q + ++ +D S+E E+
Sbjct: 434 EEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSD----SDSSSSEEEEE 483
Score = 40.0 bits (92), Expect = 0.002
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 137 TSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKK--QKKSKKEATDITADSSSEFSEETGA 194
+S + +SS+ E K KK + K K ++ K++ + + D ++DS S SEE
Sbjct: 424 SSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEE 483
Query: 195 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAE---SNTSHSDDSASSSSEESEERDTKKTK 251
T K K +K + + KPA + + SN+S SDD SS EE E+ K +
Sbjct: 484 K-TSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDD---SSEEEEEKLKGKGSP 539
Query: 252 RKKREKKAHTS--------VANNEIQERTNKR 275
R + K TS A N +E K+
Sbjct: 540 RPQAPKANGTSALTAQNGKAAKNSEEEEEEKK 571
Score = 38.1 bits (87), Expect = 0.009
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 171 KKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSH 230
KK+KK+A+ ++ SSE EE +K P KR K+ K
Sbjct: 76 KKAKKKASSSDSEDSSEEEEEVQGPPAKKAAVPAKRVGLPPGKAAAKA------------ 123
Query: 231 SDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 290
S SSSSEES + D ++ ++K+ +K + Q + K K + + ++SS
Sbjct: 124 ---SESSSSEESSDDDDEEDQKKQPVQK------GVKPQAKAAKAPPKKAKSSDSDSDSS 174
Query: 291 EDD 293
+D
Sbjct: 175 SED 177
Score = 36.6 bits (83), Expect = 0.027
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 135 KKTSPQVKSSTHESRKHKKSKKSHKKKQKK----RSHKKQKKSKKEATDITADSSSEFSE 190
+ +S SS+ E + K SK + KKK +K + K +KK + + SSS+ S
Sbjct: 467 RDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSS 526
Query: 191 ETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKT 250
E + P + K+ S A+++ ++ ++ S+ KK
Sbjct: 527 EEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKR 586
Query: 251 KRKKREKKAHTSVA 264
K+ + K+A T A
Sbjct: 587 KQNEAAKEAETPQA 600
Score = 34.7 bits (78), Expect = 0.10
Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 30/208 (14%)
Query: 54 SSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGY 113
SSSS S D E ++ PK T+ + AK+ K A P R S
Sbjct: 218 SSSSSSSSSSDDSEEEKAAATPKK----TVPKKQVVAKAPVKA-----ATTPTRKSSSS- 267
Query: 114 KELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKS 173
E+ +D ++Q K P + KKS + K+ +K+
Sbjct: 268 -----EDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAV-----EKQQ 317
Query: 174 KKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDD 233
E+++ ++D S SEE K+P + S K+ KP +A ++S S D
Sbjct: 318 PVESSEDSSDESDSSSEEE--------KKPPTKAVVS--KATTKPPPAKKAAESSSDSSD 367
Query: 234 SASSSSEESEERDTKKTKRKKREKKAHT 261
S SS +E+ + TK + T
Sbjct: 368 SDSSEDDEAPSKPAGTTKNSSNKPAVTT 395
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 53.5 bits (127), Expect = 2e-07
Identities = 33/149 (22%), Positives = 64/149 (42%), Gaps = 2/149 (1%)
Query: 142 KSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGK 201
+ S +E RKH+ +S + ++ + K KK K E + SS + E +S G+
Sbjct: 52 RKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSS--ENGE 109
Query: 202 QPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHT 261
HKRK++ + + S S + S S E + ++ R++++ ++ +
Sbjct: 110 DRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRS 169
Query: 262 SVANNEIQERTNKRTNWKVATDERSAESS 290
I+ R+ R+ + T RS S
Sbjct: 170 RERKRRIRSRSRSRSRHRHRTRSRSRTRS 198
Score = 46.6 bits (109), Expect = 3e-05
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 24/171 (14%)
Query: 125 SSDQQDITNGKKTSPQ--VKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITA 182
S ++D +KTSP K E ++ K H + + RS ++++KS E
Sbjct: 4 SDTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEG----- 58
Query: 183 DSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSAS---SSS 239
+ S +++G++ H+ K KS KK E ++ HS D +SS
Sbjct: 59 ------RKHRSRSRSKEGRR-HESKDKSSKKHKS------EEHNDKEHSSDKGRERLNSS 105
Query: 240 EESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 290
E E+R K+ +RK ++H+ + E + R+ R K + R + S
Sbjct: 106 ENGEDRH-KRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKS 155
Score = 42.7 bits (99), Expect = 4e-04
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 14/134 (10%)
Query: 136 KTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGAS 195
K+S + KS H ++H K + + + K+ +++++ + S S E S
Sbjct: 78 KSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRS 137
Query: 196 GTRKGKQPHKR-------------KKKSRKKSL-KKPALFLEAESNTSHSDDSASSSSEE 241
+R+ K+ R +KKSR +S +K + + S + H + S S
Sbjct: 138 RSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTR 197
Query: 242 SEERDTKKTKRKKR 255
S RD KK K R
Sbjct: 198 SRSRDRKKRIEKPR 211
Score = 42.0 bits (97), Expect = 6e-04
Identities = 48/229 (20%), Positives = 97/229 (42%), Gaps = 21/229 (9%)
Query: 55 SSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYK 114
S SR R D E +++ R +++ E K KS +KK E N + G +
Sbjct: 45 SRSRERKRKSDNEGRKHRSRSRSKEGRRHES---KDKS-SKKHKSEEHNDKEHSSDKGRE 100
Query: 115 ELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSK 174
L E D +++ +K+S S SR+ + +S ++K+ + +++KKS+
Sbjct: 101 RLNSSENGEDRHKRKE----RKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSR 156
Query: 175 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKS----------RKKSLKKPALFLEA 224
+ + S + + + H+ + +S RKK ++KP F +
Sbjct: 157 SRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRS 216
Query: 225 ESNT-SHSDDSASSSSEESEERDTKKTKRKKR--EKKAHTSVANNEIQE 270
S T S +++ +++E ++ +R K+ E++ V + QE
Sbjct: 217 LSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQQE 265
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 53.1 bits (126), Expect = 3e-07
Identities = 58/286 (20%), Positives = 124/286 (43%), Gaps = 29/286 (10%)
Query: 21 HNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS 80
H + E + + E EK+++D +K + + R S+ D+ + R K++
Sbjct: 409 HRNVSESPN--RKNEKEKKVKDHKSNSKERDI-----RRNSEKDDKYKNKVKKRAKSKSR 461
Query: 81 GTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQ-QDITNGKKTSP 139
++ + +K + E M R ++ + +E ++DS + Q+ + K+ S
Sbjct: 462 SKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSK 521
Query: 140 QVKSSTHESRKHKKSKKSHKKKQK----------KRSHKKQKKSKKEATDITADSSSEFS 189
Q++S ++E H KSK+ ++ Q K S+ + + + + D + S
Sbjct: 522 QLESKSNE-HDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVRSRTH 580
Query: 190 EETGASGT---RKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 246
+ + R +Q ++R+ +SR + + P ++ DS SS EES+ R+
Sbjct: 581 DRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRN 640
Query: 247 TKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
K K + +E K+ N+E ++R ++ D S+ +S +
Sbjct: 641 --KDKYRNQESKSSHRKENSESEKRMYSKSR-----DHNSSNNSRE 679
Score = 49.7 bits (117), Expect = 3e-06
Identities = 38/207 (18%), Positives = 83/207 (40%), Gaps = 2/207 (0%)
Query: 69 QRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQ 128
+R+ K+E++ E+ + +K D+ N+ + KE ++ +++S ++
Sbjct: 378 ERWIKGDKSELNEIKENQRSPVRVKERKITDHR-NVSESPNRKNEKEKKVKDHKSNSKER 436
Query: 129 QDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEF 188
N +K ++ +SK K K K+R K + +K + E
Sbjct: 437 DIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHEN 496
Query: 189 SEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTK 248
+E KGK + + K + K L+ + + S + D A S S E + K
Sbjct: 497 VKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHD-HSKSKEKDRRAQSRSRECDITKGK 555
Query: 249 KTKRKKREKKAHTSVANNEIQERTNKR 275
+ + +++ + + ++ RT+ R
Sbjct: 556 HSYNSRTRERSRSRDRSRRVRSRTHDR 582
Score = 48.9 bits (115), Expect = 5e-06
Identities = 52/280 (18%), Positives = 111/280 (39%), Gaps = 31/280 (11%)
Query: 26 EESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLED 85
+E D R EK+M +G + + + S G D+E R + K S + E
Sbjct: 471 KERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEH 530
Query: 86 DFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSST 145
D K+K +++ G Y +S ++ + + S +V+S T
Sbjct: 531 DHSKSKEKDRRAQSRSRECDITKGKHSY-----------NSRTRERSRSRDRSRRVRSRT 579
Query: 146 HESRKHKKSKKSHK------------KKQKKRSHKKQKKSKKEATDITADSSSEFSEETG 193
H+ R +SK+ H+ + +++R+ + +SK SSE E
Sbjct: 580 HD-RDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREE--- 635
Query: 194 ASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRK 253
+ K K ++ K S +K + + ++S +S +++ + ++ K K+
Sbjct: 636 SQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQS 695
Query: 254 KREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
++ + +S+ N+ E+ V + + ++ E+D
Sbjct: 696 SQDNELKSSMLKNKEDEKIRS----SVEKENQKSKGQEND 731
Score = 48.1 bits (113), Expect = 9e-06
Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 25/137 (18%)
Query: 156 KSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGT-------------RKGKQ 202
KS KK++K+ HK S ++D + S S+ S ++ S + RK +
Sbjct: 180 KSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSR 239
Query: 203 PHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS------------EESEERDTKKT 250
HK++KK RKKS K + EAE+ + + + + D K+
Sbjct: 240 KHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKER 299
Query: 251 KRKKREKKAHTSVANNE 267
K ++RE++ + N++
Sbjct: 300 KNRERERERECNPPNSQ 316
Score = 47.8 bits (112), Expect = 1e-05
Identities = 53/272 (19%), Positives = 111/272 (40%), Gaps = 17/272 (6%)
Query: 27 ESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDD 86
+ D ++ E+++ R +RK+ + + +E+ ++ K+ S + E D
Sbjct: 382 KGDKSELNEIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKV----KDHKSNSKERD 437
Query: 87 FLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTH 146
+ + K+ + S KE + E DS ++ K+ + K H
Sbjct: 438 IRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSK-ERDSKHNRN--EEKRMRSRSKGRDH 494
Query: 147 ESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITAD-SSSEFSEETGASGTR-----KG 200
E+ K K+ + K K ++RS K+K + E+ D S S+ + S +R KG
Sbjct: 495 ENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKG 554
Query: 201 KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAH 260
K + + + R +S + S T D S S E++ ++ + + R ++
Sbjct: 555 KHSYNSRTRERSRSRDRSR---RVRSRTHDRDRSRSKEYHRYREQEYRR-RGRSRSRERR 610
Query: 261 TSVANNEIQERTNKRTNWKVATDERSAESSED 292
T + ++R +R + + + E S ++D
Sbjct: 611 TPPGRSRSKDRRRRRRDSRSSEREESQSRNKD 642
Score = 43.9 bits (102), Expect = 2e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 203 PHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTS 262
P + KK KK K + + S++ S DS SSS E T++ K KKR+KK H
Sbjct: 179 PKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEE-KSKKRKKK-HRK 236
Query: 263 VANNEIQERTNKRTNWKVATDERSAESSE 291
+ +E+ ++ + K A+ E AE+ E
Sbjct: 237 NSRKHKKEKKKRKKSKKSASSESEAENLE 265
Score = 42.4 bits (98), Expect = 5e-04
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 14/124 (11%)
Query: 123 TDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKK--RSHKKQKKSKKEATDI 180
+ SSD ++ + +S S + K KK KK H+K +K + KK+KKSKK A
Sbjct: 199 SSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSA--- 255
Query: 181 TADSSSEFSEETGASGTRKGKQP---------HKRKKKSRKKSLKKPALFLEAESNTSHS 231
+++S +E E S R + P K K+ +K K E E N +S
Sbjct: 256 SSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADEKERKNRERERERECNPPNS 315
Query: 232 DDSA 235
++
Sbjct: 316 QPAS 319
Score = 42.0 bits (97), Expect = 6e-04
Identities = 46/263 (17%), Positives = 98/263 (37%), Gaps = 29/263 (11%)
Query: 21 HNKIQEES--------DMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYY 72
HN+ +E+ D ++E EKQ + + +R S ++ S + + +
Sbjct: 477 HNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSK 536
Query: 73 WRPKNEISGTLEDDFLKAK-SWNKKFYDYEANMP------------DRWGHSGYKELYPE 119
+ + S + E D K K S+N + + + DR Y +
Sbjct: 537 EKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQ 596
Query: 120 EFET---DSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKE 176
E+ S ++ G+ S + +SR ++ + + K K R+ + + +KE
Sbjct: 597 EYRRRGRSRSRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKE 656
Query: 177 ATDITADSSSEFSEETGASGTRKGK-----QPHKRKKKSRKKSLKKPALFLEAESNTSHS 231
++ S+ + ++ +R+ K P + K+S + + K ++ E S
Sbjct: 657 NSESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRS 716
Query: 232 DDSASSSSEESEERDTKKTKRKK 254
+ + +E D K KK
Sbjct: 717 SVEKENQKSKGQENDHVHEKNKK 739
Score = 40.8 bits (94), Expect = 0.001
Identities = 56/299 (18%), Positives = 114/299 (38%), Gaps = 28/299 (9%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKN 77
+D+ + +E+S K + + + KRK S+S S+ + E+Q
Sbjct: 217 SDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSKKSASS-ESEAENLEAQPQSTVRPE 275
Query: 78 EISGTLEDDFLKAKSWNK----------KFYDYEANMPDRWGHSGYKELY---------- 117
EI E+ FL KS K + + E N P+ S + L
Sbjct: 276 EIPPIPENRFLMRKSPPKADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKG 335
Query: 118 --PEEFETDS-SDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSK 174
P + T S S +D +T P + +++ + S K K + K+++
Sbjct: 336 RGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQ 395
Query: 175 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 234
+ + + ++ S + K ++K K K + K+ + +E + + +
Sbjct: 396 RSPVRV---KERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKV 452
Query: 235 ASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
+ +S + +K+K K+R+ K H ++ R+ R + V E+ ++S D
Sbjct: 453 KKRAKSKSRSKSKEKSKSKERDSK-HNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKD 510
Score = 36.2 bits (82), Expect = 0.035
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 123 TDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITA 182
+ SS D + + SS ES +KSKK +KK+ +++ +K KK KK+
Sbjct: 196 SSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKK--RKKKHRKNSRKHKKEKKKRKKSKK 253
Query: 183 DSSSEFSEE 191
+SSE E
Sbjct: 254 SASSESEAE 262
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 53.1 bits (126), Expect = 3e-07
Identities = 31/111 (27%), Positives = 63/111 (56%), Gaps = 4/111 (3%)
Query: 152 KKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQP---HKRKK 208
+K +S + + + S K++KKS+K+ + + S+S+ + + A G P + K+
Sbjct: 130 RKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEASPSPCITERSKQ 189
Query: 209 KSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTK-KTKRKKREKK 258
K+R+++ + + S++S S S+SSSS + ++ K K KR+K++KK
Sbjct: 190 KARRRTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKK 240
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 9/153 (5%)
Query: 123 TDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITA 182
+ SS ++ +S SS ++ K K KKK+K++ KK+ K K EA + A
Sbjct: 200 SSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEA 259
Query: 183 DSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEES 242
+ ++G + ++KSR +++K T D+ S +
Sbjct: 260 LPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK---------PMTKEEWDARQSIIRKV 310
Query: 243 EERDTKKTKRKKREKKAHTSVANNEIQERTNKR 275
+ +T +T+ K + + + E NK+
Sbjct: 311 VDPETGRTRLIKGDGEVLEEIVTKERHREINKQ 343
Score = 39.3 bits (90), Expect = 0.004
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 126 SDQQDITNGKKTSPQVKSSTHESRKHKKSKKSH---------KKKQKKRSHKKQKKSKKE 176
S+++ + K TS +ST + RK + + + KQK R + S
Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEASPSPCITERSKQKARRRTRSSSSSSS 203
Query: 177 ATDITADSSSEFSEETGASGTRK-----GKQPHKRKKKSR-KKSLKKPALFLEAESNTSH 230
++ ++ SSS S + + G +K K+ K+KK+ + KK K+ A + E+
Sbjct: 204 SSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGP 263
Query: 231 SDDSASSSSEESEERDTKKTKRKKR 255
S D S+ E E+ ++K R
Sbjct: 264 SLDQWHRSAGEEEDGPVLTDEQKSR 288
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 52.8 bits (125), Expect = 4e-07
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 32/171 (18%)
Query: 122 ETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
E +S + G+ S S S+ H + K+S + K + RSH + + +K+
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRS-QSKHRSRSHNRSRSRQKDR---- 348
Query: 182 ADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEE 241
R+ K PHK++ KSR++ + + SHS D + E+
Sbjct: 349 ----------------RRSKSPHKKRSKSRERRKSR---------SRSHSRDKRKDTREK 383
Query: 242 SEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
+E++ + K K REK+ + +ER + K +R + +D
Sbjct: 384 IKEKE--RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKD 432
Score = 49.7 bits (117), Expect = 3e-06
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Query: 119 EEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 178
+E E D +++ K+ + S K KK KKS + + ++ + S +E
Sbjct: 439 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERR 498
Query: 179 DITADSSSEFSEETGASGTRKGKQ---PHKRKKKSRKKSLKKPALF--LEAESNTSHSDD 233
+ SSS S T + RK + P R KK +K+ ++ + E E +TS
Sbjct: 499 RRRSRSSSR-SPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 557
Query: 234 SASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRT 276
S +E E+++ K K+ K+ +SV + E+ ++ RT
Sbjct: 558 SNDRDGKEKLEKNSTSLKEKEHNKEPDSSV-SKEVDDKDAPRT 599
Score = 48.9 bits (115), Expect = 5e-06
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 144 STHESRKHKKSKKSHKKKQKKRS---HKKQKKSKKEATDITADSSSEFSEETGASGTRKG 200
S H SR H +S+ ++K ++RS HKK+ KS++ + S + ++T K
Sbjct: 331 SKHRSRSHNRSRS--RQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT----REKI 384
Query: 201 KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAH 260
K+ + K+K R+K ++ + + + ++ E+D +K K K RE++
Sbjct: 385 KEKERVKEKDREKERER------EKEREKEKERGKNKDRDKEREKDREKDKEKDRERERE 438
Query: 261 TSVANNEIQERTNKRTNWKVATDERSAESSE 291
+ +E+ ++ K +RS E E
Sbjct: 439 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDE 469
Score = 45.1 bits (105), Expect = 8e-05
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 126 SDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSS 185
S Q+D K SP K S +SR+ +KS+ + K++ +++ K K+ + +
Sbjct: 343 SRQKDRRRSK--SPHKKRS--KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKE 398
Query: 186 SEFSEETGASGTR-KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE- 243
E +E R K K K ++K R+K +K E E H D +E +
Sbjct: 399 REREKEREKEKERGKNKDRDKEREKDREKDKEKDR---EREREKEHEKDRDKEKEKEQDK 455
Query: 244 ----ERDTKK--TKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 290
E+D K +++K++KK+ T + R+ + + RS+ S
Sbjct: 456 EKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRS 508
Score = 43.1 bits (100), Expect = 3e-04
Identities = 48/263 (18%), Positives = 102/263 (38%), Gaps = 22/263 (8%)
Query: 20 AHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEI 79
+H++ + + KI+E E+ E + + + R D + +R R K++
Sbjct: 371 SHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKE 430
Query: 80 SGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKK--T 137
+D + + ++K D E K+ E E D++ T +
Sbjct: 431 ----KDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNA 486
Query: 138 SPQVKSSTHESRKHK--------KSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFS 189
S + +SS+ E R+ + ++ K+ K+K + + + K + + D SE
Sbjct: 487 SRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERR 546
Query: 190 EETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKK 249
E ++ RK K+K K S + H+ + SS S+E +++D +
Sbjct: 547 ERERSTSMRKSSNDRDGKEKLEKNS--------TSLKEKEHNKEPDSSVSKEVDDKDAPR 598
Query: 250 TKRKKREKKAHTSVANNEIQERT 272
T+ K + + + + +T
Sbjct: 599 TEENKIQHNGNCQLNEENLSTKT 621
Score = 42.7 bits (99), Expect = 4e-04
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 21/231 (9%)
Query: 47 TKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPD 106
T+ K SS S R + SQ + + S + + D ++KS +KK
Sbjct: 312 TRSKSRSSSKSHSRR----KRSQSKHRSRSHNRSRSRQKDRRRSKSPHKK---------- 357
Query: 107 RWGHSGYKELYPEEFETDSSDQQDITNGK-KTSPQVKSSTHESRKHKKSKKSHKKKQKKR 165
S +E + S D++ T K K +VK E + ++ ++ +K++ K
Sbjct: 358 ---RSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 414
Query: 166 SHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAE 225
+ +++ K D D E E+ K K+ + K+K R+K K +
Sbjct: 415 KDRDKEREKDREKDKEKDRERE-REKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKK 473
Query: 226 SNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRT 276
S + + ++S S R + + +R++R + + S ++ +R + R+
Sbjct: 474 DKKSRTPPRSYNASRRS--RSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 522
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/180 (15%), Positives = 73/180 (40%), Gaps = 1/180 (0%)
Query: 114 KELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRK-HKKSKKSHKKKQKKRSHKKQKK 172
KE E+ + D+ + + K E K H+K + K+K++ + +++K
Sbjct: 403 KEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKD 462
Query: 173 SKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSD 232
KE + + + +R+ + + +++ R +S + + S
Sbjct: 463 RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 522
Query: 233 DSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
S S +++ ++R+ ++ +R ++ ++ +R K K +T + E +++
Sbjct: 523 PSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKE 582
Score = 35.8 bits (81), Expect = 0.046
Identities = 26/132 (19%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 168 KKQKKSKKEATDITADSSSEFSEETGASGTRKG--KQPHKRKK-----KSRKKSLKKPAL 220
K+ ++ K + + S+ E+G S RKG + H R K KS + + +
Sbjct: 273 KELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSK 332
Query: 221 FLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKV 280
N S S S+ ++ +K +R+K ++H+ + +E+ ++ K
Sbjct: 333 HRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKE 392
Query: 281 ATDERSAESSED 292
E+ E ++
Sbjct: 393 KDREKEREREKE 404
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 52.8 bits (125), Expect = 4e-07
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 32/171 (18%)
Query: 122 ETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
E +S + G+ S S S+ H + K+S + K + RSH + + +K+
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRS-QSKHRSRSHNRSRSRQKDR---- 232
Query: 182 ADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEE 241
R+ K PHK++ KSR++ + + SHS D + E+
Sbjct: 233 ----------------RRSKSPHKKRSKSRERRKSR---------SRSHSRDKRKDTREK 267
Query: 242 SEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
+E++ + K K REK+ + +ER + K +R + +D
Sbjct: 268 IKEKE--RVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKEKD 316
Score = 49.7 bits (117), Expect = 3e-06
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Query: 119 EEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 178
+E E D +++ K+ + S K KK KKS + + ++ + S +E
Sbjct: 323 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERR 382
Query: 179 DITADSSSEFSEETGASGTRKGKQ---PHKRKKKSRKKSLKKPALF--LEAESNTSHSDD 233
+ SSS S T + RK + P R KK +K+ ++ + E E +TS
Sbjct: 383 RRRSRSSSR-SPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRKS 441
Query: 234 SASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRT 276
S +E E+++ K K+ K+ +SV + E+ ++ RT
Sbjct: 442 SNDRDGKEKLEKNSTSLKEKEHNKEPDSSV-SKEVDDKDAPRT 483
Score = 48.9 bits (115), Expect = 5e-06
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 15/151 (9%)
Query: 144 STHESRKHKKSKKSHKKKQKKRS---HKKQKKSKKEATDITADSSSEFSEETGASGTRKG 200
S H SR H +S+ ++K ++RS HKK+ KS++ + S + ++T K
Sbjct: 215 SKHRSRSHNRSRS--RQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDT----REKI 268
Query: 201 KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAH 260
K+ + K+K R+K ++ + + + ++ E+D +K K K RE++
Sbjct: 269 KEKERVKEKDREKERER------EKEREKEKERGKNKDRDKEREKDREKDKEKDRERERE 322
Query: 261 TSVANNEIQERTNKRTNWKVATDERSAESSE 291
+ +E+ ++ K +RS E E
Sbjct: 323 KEHEKDRDKEKEKEQDKEKEREKDRSKEIDE 353
Score = 45.1 bits (105), Expect = 8e-05
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 15/173 (8%)
Query: 126 SDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSS 185
S Q+D K SP K S +SR+ +KS+ + K++ +++ K K+ + +
Sbjct: 227 SRQKDRRRSK--SPHKKRS--KSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKE 282
Query: 186 SEFSEETGASGTR-KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESE- 243
E +E R K K K ++K R+K +K E E H D +E +
Sbjct: 283 REREKEREKEKERGKNKDRDKEREKDREKDKEKDR---EREREKEHEKDRDKEKEKEQDK 339
Query: 244 ----ERDTKK--TKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESS 290
E+D K +++K++KK+ T + R+ + + RS+ S
Sbjct: 340 EKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRS 392
Score = 43.1 bits (100), Expect = 3e-04
Identities = 48/263 (18%), Positives = 102/263 (38%), Gaps = 22/263 (8%)
Query: 20 AHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEI 79
+H++ + + KI+E E+ E + + + R D + +R R K++
Sbjct: 255 SHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDKE 314
Query: 80 SGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKK--T 137
+D + + ++K D E K+ E E D++ T +
Sbjct: 315 ----KDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNA 370
Query: 138 SPQVKSSTHESRKHK--------KSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFS 189
S + +SS+ E R+ + ++ K+ K+K + + + K + + D SE
Sbjct: 371 SRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISERR 430
Query: 190 EETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKK 249
E ++ RK K+K K S + H+ + SS S+E +++D +
Sbjct: 431 ERERSTSMRKSSNDRDGKEKLEKNS--------TSLKEKEHNKEPDSSVSKEVDDKDAPR 482
Query: 250 TKRKKREKKAHTSVANNEIQERT 272
T+ K + + + + +T
Sbjct: 483 TEENKIQHNGNCQLNEENLSTKT 505
Score = 42.7 bits (99), Expect = 4e-04
Identities = 47/231 (20%), Positives = 95/231 (41%), Gaps = 21/231 (9%)
Query: 47 TKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSWNKKFYDYEANMPD 106
T+ K SS S R + SQ + + S + + D ++KS +KK
Sbjct: 196 TRSKSRSSSKSHSRR----KRSQSKHRSRSHNRSRSRQKDRRRSKSPHKK---------- 241
Query: 107 RWGHSGYKELYPEEFETDSSDQQDITNGK-KTSPQVKSSTHESRKHKKSKKSHKKKQKKR 165
S +E + S D++ T K K +VK E + ++ ++ +K++ K
Sbjct: 242 ---RSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKN 298
Query: 166 SHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAE 225
+ +++ K D D E E+ K K+ + K+K R+K K +
Sbjct: 299 KDRDKEREKDREKDKEKDRERE-REKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKK 357
Query: 226 SNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRT 276
S + + ++S S R + + +R++R + + S ++ +R + R+
Sbjct: 358 DKKSRTPPRSYNASRRS--RSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 406
Score = 40.0 bits (92), Expect = 0.002
Identities = 27/180 (15%), Positives = 73/180 (40%), Gaps = 1/180 (0%)
Query: 114 KELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRK-HKKSKKSHKKKQKKRSHKKQKK 172
KE E+ + D+ + + K E K H+K + K+K++ + +++K
Sbjct: 287 KEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKD 346
Query: 173 SKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSD 232
KE + + + +R+ + + +++ R +S + + S
Sbjct: 347 RSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRS 406
Query: 233 DSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
S S +++ ++R+ ++ +R ++ ++ +R K K +T + E +++
Sbjct: 407 PSPRSRNKKDKKREKERDHISERRERERSTSMRKSSNDRDGKEKLEKNSTSLKEKEHNKE 466
Score = 35.8 bits (81), Expect = 0.046
Identities = 26/132 (19%), Positives = 54/132 (40%), Gaps = 7/132 (5%)
Query: 168 KKQKKSKKEATDITADSSSEFSEETGASGTRKG--KQPHKRKK-----KSRKKSLKKPAL 220
K+ ++ K + + S+ E+G S RKG + H R K KS + + +
Sbjct: 157 KELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSK 216
Query: 221 FLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKV 280
N S S S+ ++ +K +R+K ++H+ + +E+ ++ K
Sbjct: 217 HRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKE 276
Query: 281 ATDERSAESSED 292
E+ E ++
Sbjct: 277 KDREKEREREKE 288
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 52.4 bits (124), Expect = 5e-07
Identities = 43/252 (17%), Positives = 109/252 (43%), Gaps = 22/252 (8%)
Query: 25 QEESDMW----KIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS 80
++E MW KIRELE++M + + +++ ++R +E + WR + +I
Sbjct: 334 RQEEMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQEEKI- 392
Query: 81 GTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQ 140
+ +K + E M ++ G +E E E + +Q++ K Q
Sbjct: 393 ----------REQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQEE-----KMRRQ 437
Query: 141 VKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKG 200
+ + +K ++ ++ +++++ +++K ++E ++ + EE K
Sbjct: 438 EEKIREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKI 497
Query: 201 KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTK--KTKRKKREKK 258
++ K+ ++ +K ++ + E E ++ E+ +E++ K + + K RE++
Sbjct: 498 REQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQE 557
Query: 259 AHTSVANNEIQE 270
++QE
Sbjct: 558 VRLRQQEEKMQE 569
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 51.6 bits (122), Expect = 8e-07
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 106 DRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQK-- 163
DR S PE SS+++D + +VK + +S+K+K K K+K++
Sbjct: 1764 DRSAASPVVSSMPERASESSSEEKD---DYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDS 1820
Query: 164 ------KRSHKKQKKSKKEATDITADSSSEFSE-ETGASGTRKGKQPHKRKKKSRKKSLK 216
KRS + KS+K ++ + + S+ ++ S TR + +R++ SR +S
Sbjct: 1821 SLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKS 1880
Query: 217 KPALFLEAES---NTSHSDDSASSSSEESEERDTKKTKRKK-----REKKAHTSVANNEI 268
+ + E + H S + S RD +KT R + R ++HT +
Sbjct: 1881 RGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTP-SRRRR 1939
Query: 269 QERTNKRTNWKVATDERSAESS 290
+R ++ ++ RS S
Sbjct: 1940 SRSVGRRRSFSISPSRRSRTPS 1961
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 136 KTSPQVKSSTHESRKHKK--SKKSHKKKQKKRSHKKQKKSKKEAT--------DITADSS 185
+T P + T +S+KHKK +KK KKK+K++ +K+Q + + T D+ +DS
Sbjct: 96 QTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESDSF 155
Query: 186 SEFSEETGA 194
+F E A
Sbjct: 156 LKFDSEPSA 164
Score = 33.9 bits (76), Expect = 0.17
Identities = 23/150 (15%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Query: 125 SSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADS 184
S + T + S + + S+ SR + ++S K+++KRS K + KS++ ++
Sbjct: 1854 SKSHRSQTRSRSRSRRRRRSSR-SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSR 1912
Query: 185 SSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEE 244
+ + + + + H ++ R +S+ + F + S S + S +
Sbjct: 1913 DNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1972
Query: 245 RDTKKTKRKKREKKAHTSVANNEIQERTNK 274
+++++ R + + + + R ++
Sbjct: 1973 TPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
Score = 28.1 bits (61), Expect = 9.6
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 169 KQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFL----EA 224
K+ K + D + E T+K K+ K K K +KK +K + E+
Sbjct: 84 KEGSRKSRCVSVQTDPTDEIP-------TKKSKKHKKHKNKKKKKKKEKEKKYKRQPEES 136
Query: 225 ESNTSHSDD 233
ES T DD
Sbjct: 137 ESKTKSHDD 145
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 51.6 bits (122), Expect = 8e-07
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 106 DRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQK-- 163
DR S PE SS+++D + +VK + +S+K+K K K+K++
Sbjct: 1764 DRSAASPVVSSMPERASESSSEEKD---DYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDS 1820
Query: 164 ------KRSHKKQKKSKKEATDITADSSSEFSE-ETGASGTRKGKQPHKRKKKSRKKSLK 216
KRS + KS+K ++ + + S+ ++ S TR + +R++ SR +S
Sbjct: 1821 SLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKS 1880
Query: 217 KPALFLEAES---NTSHSDDSASSSSEESEERDTKKTKRKK-----REKKAHTSVANNEI 268
+ + E + H S + S RD +KT R + R ++HT +
Sbjct: 1881 RGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTP-SRRRR 1939
Query: 269 QERTNKRTNWKVATDERSAESS 290
+R ++ ++ RS S
Sbjct: 1940 SRSVGRRRSFSISPSRRSRTPS 1961
Score = 40.0 bits (92), Expect = 0.002
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 10/69 (14%)
Query: 136 KTSPQVKSSTHESRKHKK--SKKSHKKKQKKRSHKKQKKSKKEAT--------DITADSS 185
+T P + T +S+KHKK +KK KKK+K++ +K+Q + + T D+ +DS
Sbjct: 96 QTDPTDEIPTKKSKKHKKHKNKKKKKKKEKEKKYKRQPEESESKTKSHDDGNIDLESDSF 155
Query: 186 SEFSEETGA 194
+F E A
Sbjct: 156 LKFDSEPSA 164
Score = 33.9 bits (76), Expect = 0.17
Identities = 23/150 (15%), Positives = 63/150 (42%), Gaps = 1/150 (0%)
Query: 125 SSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADS 184
S + T + S + + S+ SR + ++S K+++KRS K + KS++ ++
Sbjct: 1854 SKSHRSQTRSRSRSRRRRRSSR-SRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSR 1912
Query: 185 SSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEE 244
+ + + + + H ++ R +S+ + F + S S + S +
Sbjct: 1913 DNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSR 1972
Query: 245 RDTKKTKRKKREKKAHTSVANNEIQERTNK 274
+++++ R + + + + R ++
Sbjct: 1973 TPSRRSRTPSRRSRTPSRRSRTPSRRRRSR 2002
Score = 28.1 bits (61), Expect = 9.6
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 11/69 (15%)
Query: 169 KQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFL----EA 224
K+ K + D + E T+K K+ K K K +KK +K + E+
Sbjct: 84 KEGSRKSRCVSVQTDPTDEIP-------TKKSKKHKKHKNKKKKKKKEKEKKYKRQPEES 136
Query: 225 ESNTSHSDD 233
ES T DD
Sbjct: 137 ESKTKSHDD 145
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 51.2 bits (121), Expect = 1e-06
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 47/309 (15%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKN 77
TD +K+ + + E+ K E K K L + + + DG + ++++ K+
Sbjct: 880 TDGVDKLSGKEQSFTSLEVRKVAETK---EKSKHLKTKTCKKVQDGLSDIAEKFL--KKD 934
Query: 78 EISGTLEDDFLKAKSWN---KKFYDYEAN---MPDRW-GHSGYKELYPEEFETD------ 124
+ T EDD ++K KK D++ M ++ S E PE E
Sbjct: 935 QSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKGI 994
Query: 125 SSDQQDITNGKKTSPQVKSSTH--------------------ESRKHKKSKKSHKKKQKK 164
+ T+G+K S +++ T +S + KKSK ++KK
Sbjct: 995 KQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGREKK 1054
Query: 165 RSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEA 224
R K S+K ++D+ +E G + + K KR + +++L E
Sbjct: 1055 RCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRL---KRIELRERRNLSSKRNTKEI 1111
Query: 225 ESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDE 284
+S +S SD +EES E + KK +R +KKA RT+ + T
Sbjct: 1112 QSGSSSSD------AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSS 1165
Query: 285 RSAESSEDD 293
S++ +DD
Sbjct: 1166 SSSDIEDDD 1174
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 40/285 (14%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAY-RGTKRKMLPSSSSRMRSDGFDEESQRYYWRPK 76
+D K + D E +K AY R KR L SSR R D ++++Y +
Sbjct: 1023 SDYAEKSTGKGDSCDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSSSDTEKYSMK-- 1080
Query: 77 NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKK 136
ED + K+ EL + + ++I +G
Sbjct: 1081 -------EDGCNSSDKRLKRI-----------------ELRERRNLSSKRNTKEIQSGSS 1116
Query: 137 TSPQVKSSTHESRKHKKSKKSHKKK-----QKKRSHKKQKKSKKEATDITADSSSEFSEE 191
+S +SS E K KK + S KKK +KKR+ + +K+A DIT+ SSS+ ++
Sbjct: 1117 SSDAEESS--EDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQA-DITSSSSSDIEDD 1173
Query: 192 TGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK 251
S K K + L F ++ + + S + ++ ++ D +
Sbjct: 1174 DQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRI 1233
Query: 252 RKK---REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
KK E KA+ S ++E ++ K T +++ E+ D+
Sbjct: 1234 AKKMLLEEIKANLS--SDEDGSSDDEPEEGKKRTGKQNEENPGDE 1276
Score = 42.0 bits (97), Expect = 6e-04
Identities = 50/266 (18%), Positives = 102/266 (38%), Gaps = 17/266 (6%)
Query: 32 KIRELEKQMEDAYRGTKRKM-------LPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
K+ ++E+Q E + GT++ P ++++ D E + R K
Sbjct: 963 KVIKMEQQYESSSDGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDEL 1022
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSS 144
D+ + + D + + G G ++ + S +QD ++ S K S
Sbjct: 1023 SDYAEKSTGKGDSCDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSS----SDTEKYS 1078
Query: 145 THESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETG------ASGTR 198
E + K+ + + ++R + K++ KE ++ S +E S E S +
Sbjct: 1079 MKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKK 1138
Query: 199 KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKK 258
K ++K+ S + S K+ + + S++ DD +S E S + K +
Sbjct: 1139 KAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLS 1198
Query: 259 AHTSVANNEIQERTNKRTNWKVATDE 284
+HT + E +K V D+
Sbjct: 1199 SHTGFCQSSGDEALSKSVPVTVDDDD 1224
Score = 42.0 bits (97), Expect = 6e-04
Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 29/171 (16%)
Query: 144 STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEF---SEETGASGTRKG 200
S ES + KK+K K+ K R+ +K E +D SE SE+ TR
Sbjct: 1310 SDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSA 1369
Query: 201 KQP--------HKRKKKSRK-------KSLKKPALFLEAESNTSHSDDSASSSSEESEER 245
K+ +K+KKK R+ S K E E ++ EE +E
Sbjct: 1370 KKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDEN 1429
Query: 246 DTKKTKRKKREK--------KAHTSVANNEIQERTNKRTNWKVATDERSAE 288
D K+ K R+K K T N +E ++ ++A ER E
Sbjct: 1430 DDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRK---RIAERERERE 1477
Score = 39.7 bits (91), Expect = 0.003
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 37/184 (20%)
Query: 125 SSDQQDITNGKK---TSPQVK--SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 179
S+D D +GK+ TS +V+ + T E KH K+K KK Q S +K KK+ +D
Sbjct: 879 STDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTC-KKVQDGLSDIAEKFLKKDQSD 937
Query: 180 ITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS 239
T++ + S++ GT + K+P KKK ++ E S D
Sbjct: 938 ETSEDDKKQSKK----GTEEKKKPSDFKKK-----------VIKMEQQYESSSDGTEKLP 982
Query: 240 EESE-----------ERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAE 288
E E + T ++K ++ + TS +E+ + K T S +
Sbjct: 983 EREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTG-----KGDSCD 1037
Query: 289 SSED 292
SSED
Sbjct: 1038 SSED 1041
Score = 39.7 bits (91), Expect = 0.003
Identities = 49/228 (21%), Positives = 83/228 (36%), Gaps = 27/228 (11%)
Query: 19 DAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNE 78
+A N++ ESD E K+ +R + K+ S DG E ++ + E
Sbjct: 1277 EAKNQVNSESD--SDSEESKKPRYRHRLLRHKLTVS-------DGESGEEKKTKPKEHKE 1327
Query: 79 ISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTS 138
+ G N++ E + + SG E E E++ + + KK
Sbjct: 1328 VKGR-----------NRRKVSSEDSEDSDFQESGVSE---EVSESEDEQRPRTRSAKKAE 1373
Query: 139 PQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTR 198
+ S K KK ++ K ++ S K ++E + E EE
Sbjct: 1374 LE---ENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDEND 1430
Query: 199 KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 246
K P K +KK R K LK L E ++ ++ +E ER+
Sbjct: 1431 DSKSPGKGRKKIR-KILKDDKLRTETQNALKEEEERRKRIAERERERE 1477
Score = 38.9 bits (89), Expect = 0.005
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 31/179 (17%)
Query: 119 EEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKS----KKSHKKKQKKRSHKKQKKSK 174
EE + + + D + + P+ + H +HK + + +KK K + HK+ K
Sbjct: 1276 EEAKNQVNSESDSDSEESKKPRYR---HRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRN 1332
Query: 175 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 234
+ S+F E SG + + +++ R +S KK L
Sbjct: 1333 RRKVSSEDSEDSDFQE----SGVSEEVSESEDEQRPRTRSAKKAEL-------------- 1374
Query: 235 ASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
E +R K+ K+++R K S + N+ + + +E E E+D
Sbjct: 1375 ------EENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1427
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 1/172 (0%)
Query: 122 ETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
+ D S + GKK + + + K S + S K + + + +T
Sbjct: 1249 DEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLT 1308
Query: 182 ADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEE 241
E+ K + R+K S + S S S+D +
Sbjct: 1309 VSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRS 1368
Query: 242 SEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
+++ + ++ +R ++KK + E NK +N + +E+ E E++
Sbjct: 1369 AKKAELEENQRSYKQKKKRRRIKVQEDSSSENK-SNSEEEEEEKEEEEEEEE 1419
Score = 35.4 bits (80), Expect = 0.060
Identities = 58/298 (19%), Positives = 108/298 (36%), Gaps = 37/298 (12%)
Query: 26 EESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS-GTLE 84
E++ K R K+ + KR L +S+ R ++D S +N I G+ +
Sbjct: 1125 EDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSD 1184
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKEL-YPEEFETDSSDQQDITNGKKTSPQVK- 142
+ +K + N + + K + + + D +D ++ K ++K
Sbjct: 1185 EQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKA 1244
Query: 143 --SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEET-------- 192
SS + + ++ K+ K+ + K + +DS SE S++
Sbjct: 1245 NLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLR 1304
Query: 193 -------GASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEER 245
G SG K +P + K+ + K + ++ SD S SEE E
Sbjct: 1305 HKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV------SSEDSEDSDFQESGVSEEVSES 1358
Query: 246 DTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATD----------ERSAESSEDD 293
+ ++ R + KKA N ++ KR KV D E E E++
Sbjct: 1359 EDEQRPRTRSAKKAELE-ENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEE 1415
Score = 34.7 bits (78), Expect = 0.10
Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 31/200 (15%)
Query: 110 HSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKS--HKKKQKKRSH 167
H+ +K LY + + D+ +K S +++K K +K S KKK++ +S
Sbjct: 720 HTNHKTLYDLKTQAGKDDK----GKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSE 775
Query: 168 KKQKKSKKE-------------ATDITADSSSEFSEETGASGTRKG--KQPHKRKKKSRK 212
S+ E T ++ +F ++KG Q HK K S++
Sbjct: 776 SSNYDSELEKEIKSMSKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQE 835
Query: 213 KSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK-RKKREKKAHTSVANNEIQER 271
S ++ + SS+E + ++DT + R + KK S + + + +
Sbjct: 836 GS---------SDDAERKQERETFSSAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKL 886
Query: 272 TNKRTNWKVATDERSAESSE 291
+ K ++ + AE+ E
Sbjct: 887 SGKEQSFTSLEVRKVAETKE 906
Score = 28.5 bits (62), Expect = 7.3
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 230 HSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAES 289
+S + +SSSE+S+ + ++KRK S+ ++ K + + ++ S E+
Sbjct: 59 NSKEEGTSSSEKSKSSGSSRSKRK-------PSIVTKYVESDDEKPLDDETVNEDASNEN 111
Query: 290 SEDD 293
SE+D
Sbjct: 112 SEND 115
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 51.2 bits (121), Expect = 1e-06
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 47/309 (15%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKN 77
TD +K+ + + E+ K E K K L + + + DG + ++++ K+
Sbjct: 918 TDGVDKLSGKEQSFTSLEVRKVAETK---EKSKHLKTKTCKKVQDGLSDIAEKFL--KKD 972
Query: 78 EISGTLEDDFLKAKSWN---KKFYDYEAN---MPDRW-GHSGYKELYPEEFETD------ 124
+ T EDD ++K KK D++ M ++ S E PE E
Sbjct: 973 QSDETSEDDKKQSKKGTEEKKKPSDFKKKVIKMEQQYESSSDGTEKLPEREEICHFPKGI 1032
Query: 125 SSDQQDITNGKKTSPQVKSSTH--------------------ESRKHKKSKKSHKKKQKK 164
+ T+G+K S +++ T +S + KKSK ++KK
Sbjct: 1033 KQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTGKGDSCDSSEDKKSKNGAYGREKK 1092
Query: 165 RSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEA 224
R K S+K ++D+ +E G + + K KR + +++L E
Sbjct: 1093 RCKLLGKSSRKRQDCSSSDTEKYSMKEDGCNSSDKRL---KRIELRERRNLSSKRNTKEI 1149
Query: 225 ESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDE 284
+S +S SD +EES E + KK +R +KKA RT+ + T
Sbjct: 1150 QSGSSSSD------AEESSEDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSS 1203
Query: 285 RSAESSEDD 293
S++ +DD
Sbjct: 1204 SSSDIEDDD 1212
Score = 43.9 bits (102), Expect = 2e-04
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 40/285 (14%)
Query: 18 TDAHNKIQEESDMWKIRELEKQMEDAY-RGTKRKMLPSSSSRMRSDGFDEESQRYYWRPK 76
+D K + D E +K AY R KR L SSR R D ++++Y +
Sbjct: 1061 SDYAEKSTGKGDSCDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSSSDTEKYSMK-- 1118
Query: 77 NEISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKK 136
ED + K+ EL + + ++I +G
Sbjct: 1119 -------EDGCNSSDKRLKRI-----------------ELRERRNLSSKRNTKEIQSGSS 1154
Query: 137 TSPQVKSSTHESRKHKKSKKSHKKK-----QKKRSHKKQKKSKKEATDITADSSSEFSEE 191
+S +SS E K KK + S KKK +KKR+ + +K+A DIT+ SSS+ ++
Sbjct: 1155 SSDAEESS--EDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQA-DITSSSSSDIEDD 1211
Query: 192 TGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK 251
S K K + L F ++ + + S + ++ ++ D +
Sbjct: 1212 DQNSIGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRI 1271
Query: 252 RKK---REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
KK E KA+ S ++E ++ K T +++ E+ D+
Sbjct: 1272 AKKMLLEEIKANLS--SDEDGSSDDEPEEGKKRTGKQNEENPGDE 1314
Score = 42.0 bits (97), Expect = 6e-04
Identities = 50/266 (18%), Positives = 102/266 (38%), Gaps = 17/266 (6%)
Query: 32 KIRELEKQMEDAYRGTKRKM-------LPSSSSRMRSDGFDEESQRYYWRPKNEISGTLE 84
K+ ++E+Q E + GT++ P ++++ D E + R K
Sbjct: 1001 KVIKMEQQYESSSDGTEKLPEREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDEL 1060
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSS 144
D+ + + D + + G G ++ + S +QD ++ S K S
Sbjct: 1061 SDYAEKSTGKGDSCDSSEDKKSKNGAYGREKKRCKLLGKSSRKRQDCSS----SDTEKYS 1116
Query: 145 THESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETG------ASGTR 198
E + K+ + + ++R + K++ KE ++ S +E S E S +
Sbjct: 1117 MKEDGCNSSDKRLKRIELRERRNLSSKRNTKEIQSGSSSSDAEESSEDNKKKKQRTSSKK 1176
Query: 199 KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKK 258
K ++K+ S + S K+ + + S++ DD +S E S + K +
Sbjct: 1177 KAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSDEQKIKPVTENLVLS 1236
Query: 259 AHTSVANNEIQERTNKRTNWKVATDE 284
+HT + E +K V D+
Sbjct: 1237 SHTGFCQSSGDEALSKSVPVTVDDDD 1262
Score = 42.0 bits (97), Expect = 6e-04
Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 29/171 (16%)
Query: 144 STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEF---SEETGASGTRKG 200
S ES + KK+K K+ K R+ +K E +D SE SE+ TR
Sbjct: 1348 SDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRSA 1407
Query: 201 KQP--------HKRKKKSRK-------KSLKKPALFLEAESNTSHSDDSASSSSEESEER 245
K+ +K+KKK R+ S K E E ++ EE +E
Sbjct: 1408 KKAELEENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDEN 1467
Query: 246 DTKKTKRKKREK--------KAHTSVANNEIQERTNKRTNWKVATDERSAE 288
D K+ K R+K K T N +E ++ ++A ER E
Sbjct: 1468 DDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRK---RIAERERERE 1515
Score = 39.7 bits (91), Expect = 0.003
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 37/184 (20%)
Query: 125 SSDQQDITNGKK---TSPQVK--SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATD 179
S+D D +GK+ TS +V+ + T E KH K+K KK Q S +K KK+ +D
Sbjct: 917 STDGVDKLSGKEQSFTSLEVRKVAETKEKSKHLKTKTC-KKVQDGLSDIAEKFLKKDQSD 975
Query: 180 ITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSS 239
T++ + S++ GT + K+P KKK ++ E S D
Sbjct: 976 ETSEDDKKQSKK----GTEEKKKPSDFKKK-----------VIKMEQQYESSSDGTEKLP 1020
Query: 240 EESE-----------ERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAE 288
E E + T ++K ++ + TS +E+ + K T S +
Sbjct: 1021 EREEICHFPKGIKQIKNGTTDGEKKSKKIRDKTSKKKDELSDYAEKSTG-----KGDSCD 1075
Query: 289 SSED 292
SSED
Sbjct: 1076 SSED 1079
Score = 39.7 bits (91), Expect = 0.003
Identities = 49/228 (21%), Positives = 83/228 (36%), Gaps = 27/228 (11%)
Query: 19 DAHNKIQEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNE 78
+A N++ ESD E K+ +R + K+ S DG E ++ + E
Sbjct: 1315 EAKNQVNSESD--SDSEESKKPRYRHRLLRHKLTVS-------DGESGEEKKTKPKEHKE 1365
Query: 79 ISGTLEDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTS 138
+ G N++ E + + SG E E E++ + + KK
Sbjct: 1366 VKGR-----------NRRKVSSEDSEDSDFQESGVSE---EVSESEDEQRPRTRSAKKAE 1411
Query: 139 PQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTR 198
+ S K KK ++ K ++ S K ++E + E EE
Sbjct: 1412 LE---ENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDEND 1468
Query: 199 KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERD 246
K P K +KK R K LK L E ++ ++ +E ER+
Sbjct: 1469 DSKSPGKGRKKIR-KILKDDKLRTETQNALKEEEERRKRIAERERERE 1515
Score = 38.9 bits (89), Expect = 0.005
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 31/179 (17%)
Query: 119 EEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKS----KKSHKKKQKKRSHKKQKKSK 174
EE + + + D + + P+ + H +HK + + +KK K + HK+ K
Sbjct: 1314 EEAKNQVNSESDSDSEESKKPRYR---HRLLRHKLTVSDGESGEEKKTKPKEHKEVKGRN 1370
Query: 175 KEATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDS 234
+ S+F E SG + + +++ R +S KK L
Sbjct: 1371 RRKVSSEDSEDSDFQE----SGVSEEVSESEDEQRPRTRSAKKAEL-------------- 1412
Query: 235 ASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
E +R K+ K+++R K S + N+ + + +E E E+D
Sbjct: 1413 ------EENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEED 1465
Score = 35.8 bits (81), Expect = 0.046
Identities = 29/172 (16%), Positives = 61/172 (35%), Gaps = 1/172 (0%)
Query: 122 ETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT 181
+ D S + GKK + + + K S + S K + + + +T
Sbjct: 1287 DEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLRHKLT 1346
Query: 182 ADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEE 241
E+ K + R+K S + S S S+D +
Sbjct: 1347 VSDGESGEEKKTKPKEHKEVKGRNRRKVSSEDSEDSDFQESGVSEEVSESEDEQRPRTRS 1406
Query: 242 SEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSEDD 293
+++ + ++ +R ++KK + E NK +N + +E+ E E++
Sbjct: 1407 AKKAELEENQRSYKQKKKRRRIKVQEDSSSENK-SNSEEEEEEKEEEEEEEE 1457
Score = 35.4 bits (80), Expect = 0.060
Identities = 58/298 (19%), Positives = 108/298 (36%), Gaps = 37/298 (12%)
Query: 26 EESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS-GTLE 84
E++ K R K+ + KR L +S+ R ++D S +N I G+ +
Sbjct: 1163 EDNKKKKQRTSSKKKAVIVKEKKRNSLRTSTKRKQADITSSSSSDIEDDDQNSIGEGSSD 1222
Query: 85 DDFLKAKSWNKKFYDYEANMPDRWGHSGYKEL-YPEEFETDSSDQQDITNGKKTSPQVK- 142
+ +K + N + + K + + + D +D ++ K ++K
Sbjct: 1223 EQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVTVDDDDDDNDPENRIAKKMLLEEIKA 1282
Query: 143 --SSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEET-------- 192
SS + + ++ K+ K+ + K + +DS SE S++
Sbjct: 1283 NLSSDEDGSSDDEPEEGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHRLLR 1342
Query: 193 -------GASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEER 245
G SG K +P + K+ + K + ++ SD S SEE E
Sbjct: 1343 HKLTVSDGESGEEKKTKPKEHKEVKGRNRRKV------SSEDSEDSDFQESGVSEEVSES 1396
Query: 246 DTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATD----------ERSAESSEDD 293
+ ++ R + KKA N ++ KR KV D E E E++
Sbjct: 1397 EDEQRPRTRSAKKAELE-ENQRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEE 1453
Score = 34.7 bits (78), Expect = 0.10
Identities = 40/200 (20%), Positives = 79/200 (39%), Gaps = 31/200 (15%)
Query: 110 HSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKS--HKKKQKKRSH 167
H+ +K LY + + D+ +K S +++K K +K S KKK++ +S
Sbjct: 758 HTNHKTLYDLKTQAGKDDK----GKRKRKSSTSGSDFDTKKGKSAKSSIISKKKRQTQSE 813
Query: 168 KKQKKSKKE-------------ATDITADSSSEFSEETGASGTRKG--KQPHKRKKKSRK 212
S+ E T ++ +F ++KG Q HK K S++
Sbjct: 814 SSNYDSELEKEIKSMSKIGAARTTKKRIPNTKDFDSSEDEKHSKKGMDNQGHKNLKTSQE 873
Query: 213 KSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK-RKKREKKAHTSVANNEIQER 271
S ++ + SS+E + ++DT + R + KK S + + + +
Sbjct: 874 GS---------SDDAERKQERETFSSAEGTVDKDTTIMELRDRLPKKQQASASTDGVDKL 924
Query: 272 TNKRTNWKVATDERSAESSE 291
+ K ++ + AE+ E
Sbjct: 925 SGKEQSFTSLEVRKVAETKE 944
Score = 28.5 bits (62), Expect = 7.3
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 230 HSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAES 289
+S + +SSSE+S+ + ++KRK S+ ++ K + + ++ S E+
Sbjct: 59 NSKEEGTSSSEKSKSSGSSRSKRK-------PSIVTKYVESDDEKPLDDETVNEDASNEN 111
Query: 290 SEDD 293
SE+D
Sbjct: 112 SEND 115
>gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo
sapiens]
Length = 770
Score = 51.2 bits (121), Expect = 1e-06
Identities = 51/244 (20%), Positives = 105/244 (43%), Gaps = 47/244 (19%)
Query: 16 RHTDAHNKIQEESDMWKIRELEKQMEDAY---------RGTKRKMLPSSSSRMRSDGFDE 66
RH DA N+ K E++KQ +A +G+ K + + +
Sbjct: 322 RHVDAMNEYN------KALEIDKQNVEALVARGALYATKGSLNKAIEDFELALENCPTHR 375
Query: 67 ESQRYYWRPKNEISGTLEDD--FLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETD 124
+++Y + E G LE++ FL A+S+ KK + E F+
Sbjct: 376 NARKYLCQTLVERGGQLEEEEKFLNAESYYKKALALD-----------------ETFKDA 418
Query: 125 SSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKR----SHKKQKKSKKEATDI 180
Q + + S +++ E + +K+KK +K R K+ KK ++++T
Sbjct: 419 EDALQKLHKYMQKSLELREKQAEKEEKQKTKKIETSAEKLRKLLKEEKRLKKKRRKSTSS 478
Query: 181 TADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSE 240
++ SS++ S + +S + G + HK+ K++R +S + S+ HS ++S+ +
Sbjct: 479 SSVSSADESVSSSSSSSSSGHKRHKKHKRNRSES---------SRSSRRHSSRASSNQID 529
Query: 241 ESEE 244
++ +
Sbjct: 530 QNRK 533
>gi|50409738 SRp25 nuclear protein isoform 3 [Homo sapiens]
Length = 352
Score = 51.2 bits (121), Expect = 1e-06
Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 6/125 (4%)
Query: 151 HKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQPHKRKKKS 210
H S+K + + + R +K+ KK D + + S+ S+ AS ++ K+K +
Sbjct: 126 HVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARR 185
Query: 211 RKKSLKKPALFLEAESNTSHSDDSASSSS------EESEERDTKKTKRKKREKKAHTSVA 264
R +S + + S++S S S+SSS + ++R KK KRKK +KK
Sbjct: 186 RTRSSSSSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAE 245
Query: 265 NNEIQ 269
+++
Sbjct: 246 AQQVE 250
Score = 47.4 bits (111), Expect = 2e-05
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 11/115 (9%)
Query: 144 STHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTRKGKQP 203
S SR +S+ +K+KK+S K + + +A +S T + KQ
Sbjct: 129 SRKRSRSRSRSRGRGSEKRKKKSRKDTSR------NCSASTSQGRKASTAPGAEERSKQK 182
Query: 204 HKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKK 258
+R+ +S S + S++S S S+SSSS+ ++R K KR+K++KK
Sbjct: 183 ARRRTRSSSSSSSS-----SSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKK 232
Score = 44.7 bits (104), Expect = 1e-04
Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 126 SDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSS 185
S+++ + K TS +ST + RK + + ++ ++K + + S ++ ++ SS
Sbjct: 144 SEKRKKKSRKDTSRNCSASTSQGRKASTAPGAEERSKQKARRRTRSSSSSSSSSSSSSSS 203
Query: 186 SEFSEETGASGTRKGKQPHKRKKKSRKKSLKK-------PALFLEAESNTSHSDDSASSS 238
S S + +S RK + +K K++ +KK KK A + E+ S D S
Sbjct: 204 SSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEALPGPSLDQWHRS 263
Query: 239 SEESEERDTKKTKRKKR 255
+ E E+ ++K R
Sbjct: 264 AGEEEDGPVLTDEQKSR 280
Score = 39.7 bits (91), Expect = 0.003
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 9/153 (5%)
Query: 123 TDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITA 182
+ SS ++ +S SS ++ K K KKK+K++ KK+ K K EA + A
Sbjct: 192 SSSSSSSSSSSSSSSSSSSSSSDGRKKRGKYKDKRRKKKKKRKKLKKKGKEKAEAQQVEA 251
Query: 183 DSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEES 242
+ ++G + ++KSR +++K T D+ S +
Sbjct: 252 LPGPSLDQWHRSAGEEEDGPVLTDEQKSRIQAMK---------PMTKEEWDARQSIIRKV 302
Query: 243 EERDTKKTKRKKREKKAHTSVANNEIQERTNKR 275
+ +T +T+ K + + + E NK+
Sbjct: 303 VDPETGRTRLIKGDGEVLEEIVTKERHREINKQ 335
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 51.2 bits (121), Expect = 1e-06
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 119 EEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEAT 178
E+ E D D +D G+ P ++ K +K +K +K Q K +HK+++K K++
Sbjct: 117 EDEEDDDGD-EDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKEK-- 173
Query: 179 DITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSS 238
R+ ++P KK + K+ ++K + E+ T + + +
Sbjct: 174 ------------------VREKEKP--EKKATHKEKIEKKE---KPETKTLAKEQKKAKT 210
Query: 239 SEESEERDTKKTKRKKREKKAHTSVANNEIQERTNK 274
+E+SEE+ K+ K K+EK T+ E+Q+ +K
Sbjct: 211 AEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSK 246
Score = 42.0 bits (97), Expect = 6e-04
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 16/166 (9%)
Query: 138 SPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGT 197
SP ++ E +K +K S KK++K KK K K+ A D+ + SE GT
Sbjct: 306 SPALEEKEGEKKKAEKKVTSETKKKEKEDIKK-KSEKETAIDVEKKEPGKASETK--QGT 362
Query: 198 RKGKQPHKRKKKSRK---KSLKKPALF-----LEAESNTSHSDDSASSSSEESEERDTK- 248
K KK +K K KKPA + E H + + S E S D +
Sbjct: 363 VKIAAQAAAKKDEKKEDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQV 422
Query: 249 --KTKRKKREKKAHT--SVANNEIQERTNKRTNWKVATDERSAESS 290
KT+R K E A + + +E+T K ++ ++ SS
Sbjct: 423 KAKTERAKEEIGAVSIKKAVPGKKEEKTTKTVEQEIRKEKSGKTSS 468
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/137 (23%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 116 LYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKK--QKKS 173
L +E D +++Q+ K Q K + E K K+ + +K +KK +HK+ +KK
Sbjct: 138 LRKKEIHKDKTEKQEKPERKI---QTKVTHKEKEKGKEKVREKEKPEKKATHKEKIEKKE 194
Query: 174 KKEATDITAD----SSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTS 229
K E + + ++E SEE + GKQ ++ ++ K ++K S
Sbjct: 195 KPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQK------TPSKPK 248
Query: 230 HSDDSASSSSEESEERD 246
+D ++ + E++D
Sbjct: 249 EKEDKEKAAVSKHEQKD 265
Score = 39.7 bits (91), Expect = 0.003
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 10/162 (6%)
Query: 135 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 194
KK P+ K+ E +K K ++KS +K +K+ KQ+K K+ A + + +
Sbjct: 192 KKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAKVKEVQKTPSKPKEKE 251
Query: 195 SGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSD--------DSASSSSEESEERD 246
+ H++K + +F+ + S + AS + S +
Sbjct: 252 DKEKAAVSKHEQKDQYAFCRYMID-IFVHGDLKPGQSPAIPPPLPTEQASRPTPASPALE 310
Query: 247 TKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAE 288
K+ ++KK EKK TS + +E K++ + A D E
Sbjct: 311 EKEGEKKKAEKKV-TSETKKKEKEDIKKKSEKETAIDVEKKE 351
Score = 38.1 bits (87), Expect = 0.009
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 15/167 (8%)
Query: 135 KKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA 194
KK + + K E K K K++ +KK K ++K+ I A ++++ E+
Sbjct: 321 KKVTSETKKKEKEDIKKKSEKETAIDVEKKEP-GKASETKQGTVKIAAQAAAKKDEK--K 377
Query: 195 SGTRKGKQP-----HKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEER---- 245
++K K+P K KK+ +K+ +PA + E + SD + +E ++E
Sbjct: 378 EDSKKTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVP-SDKQVKAKTERAKEEIGAV 436
Query: 246 DTKKTKRKKREKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
KK K+E+K T EI++ + +T+ + D+ + E+
Sbjct: 437 SIKKAVPGKKEEKT-TKTVEQEIRKEKSGKTS-SILKDKEPIKGKEE 481
Score = 33.1 bits (74), Expect = 0.30
Identities = 40/165 (24%), Positives = 65/165 (39%), Gaps = 15/165 (9%)
Query: 135 KKTSPQVKSSTHE--SRKHKKSKKSHKKKQKKRSH-KKQKKSKKEATDITADSSSEFSEE 191
+K PQ+K S K + K+ K +K SH K ++K K+ +T E+
Sbjct: 520 EKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHGKPEEKVLKQVKAVTI-------EK 572
Query: 192 TGASGTRKGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK 251
T K + +R+ S K KP +E S + S E E+ D K +
Sbjct: 573 TAKPKPTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKTEISEKESKEKADMKHLR 632
Query: 252 RKK----REKKAHTSVANNEIQERTNKRTNWKVATDERSAESSED 292
+K +E +V E R +K V +++ E +ED
Sbjct: 633 EEKVSTRKESLQLHNVTKAEKPARVSKDVE-DVPASKKAKEGTED 676
Score = 31.2 bits (69), Expect = 1.1
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 119 EEFETDSSDQQDITNGK--KTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKE 176
+E +T + +Q+I K KTS +K E K K+ K K+K+ KK +K K
Sbjct: 446 KEEKTTKTVEQEIRKEKSGKTSSILKDK--EPIKGKEEKVPASLKEKEPETKKDEKMSK- 502
Query: 177 ATDITADSSSEFSEETGASGTRKGKQPHKRKKKSRKKSLKKPAL-----FLEAESNTSHS 231
+ E + +K ++P + KK K ++ + ++ E SH
Sbjct: 503 -------AGKEVKPKPPQLQGKKEEKPEPQIKKEAKPAISEKVQIHKQDIVKPEKTVSHG 555
Query: 232 DD--------SASSSSEESEERDTKKTKRKKRE-------KKAHTSVANNEIQERTNKRT 276
A + + ++ + TKK + ++RE K T +E+ E K+T
Sbjct: 556 KPEEKVLKQVKAVTIEKTAKPKPTKKAEHREREPPSIKTDKPKPTPKGTSEVTESGKKKT 615
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 50.8 bits (120), Expect = 1e-06
Identities = 52/246 (21%), Positives = 107/246 (43%), Gaps = 24/246 (9%)
Query: 25 QEESDMWKIRELEKQMEDAYRGTKRKMLPSSSSRMRS-DGFDEESQRYYWRPKNEISGTL 83
+ E + + R +++ +E ++ + S SR R D D + +R +NE
Sbjct: 310 EREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDRER---EKENERGRRR 366
Query: 84 EDDFLKAKSWNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQ---DITNGKKTSPQ 140
+ D+ K + N++ + E + E+ ++ + D D++ D + KK
Sbjct: 367 DRDYDKERG-NEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKH 425
Query: 141 VKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGASGTR-- 198
+S + E RKH+ +S ++ RS K+K SK + + S E S + SG++
Sbjct: 426 SRSRSRE-RKHRSRSRSRNAGKRSRSRSKEKSSKHK------NESKEKSNKRSRSGSQGR 478
Query: 199 -------KGKQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTK 251
K ++ K+KSRK+S K S++ D +S E+++++ +
Sbjct: 479 TDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQ 538
Query: 252 RKKREK 257
K +++
Sbjct: 539 HKNKDE 544
Score = 50.1 bits (118), Expect = 2e-06
Identities = 34/152 (22%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 142 KSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDIT-ADSSSEFSEETGASGTRKG 200
K +E K ++ + K+Q+ R ++KK K++ D D + +E S +R
Sbjct: 372 KERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSR 431
Query: 201 KQPHKRKKKSRKKSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAH 260
++ H + +SR ++ K + E ++ H ++S S++ S +T ++ KK
Sbjct: 432 ERKH--RSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKRE 489
Query: 261 TSVANNEIQERTNKRTNWKVATDERSAESSED 292
S + +E++ KR+ K + +R S+D
Sbjct: 490 HSPS----KEKSRKRSRSKERSHKRDHSDSKD 517
Score = 48.1 bits (113), Expect = 9e-06
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 26/243 (10%)
Query: 34 RELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEISGTLEDDFLKAKSW 93
RELE++ E + K R RS E +R R ++ D +
Sbjct: 293 RELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRD-----RKG 347
Query: 94 NKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHKK 153
+++ D E + G ++ Y +E + +++ + +++ Q E +KHK+
Sbjct: 348 DRRDRDREREKENERGRRRDRD-YDKERGNEREKERERSR-ERSKEQRSRGEVEEKKHKE 405
Query: 154 SKKSHKKKQKKRSHKKQKKSKKEATDITADSSSEFSEETGA-SGTRKGKQPHKRKKKSRK 212
K + + KR KK+KK + + S S G S +R ++ K K +S++
Sbjct: 406 DKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKE 465
Query: 213 KSLKKPALFLEAESNTSHSDDSASSSSEESEERDTKKTKRKKREKKAHTSVANNEIQERT 272
KS K+ + S + DS S + +K++++ R K ER+
Sbjct: 466 KSNKR------SRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSK------------ERS 507
Query: 273 NKR 275
+KR
Sbjct: 508 HKR 510
Score = 42.7 bits (99), Expect = 4e-04
Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 6/165 (3%)
Query: 127 DQQDITNGKKTSPQVKSSTHESRKHKKSKKSHKKKQKKRSHKKQKKSKKEATDITADSSS 186
DQQ T +K K E +H + ++S ++ + ++S+ + SS
Sbjct: 230 DQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSS 289
Query: 187 EFSEETGASGTRKGKQPHKRKKKSRKKSLKKP-ALFLEAESNTSHSDDSASSSSEESEER 245
F E K +Q +R+ K R+K ++ ++ E S S + S S + +
Sbjct: 290 SFDREL---EREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRK 346
Query: 246 DTKKTKRKKREKKAHTSVANNE--IQERTNKRTNWKVATDERSAE 288
++ + ++REK+ + +ER N+R + + ERS E
Sbjct: 347 GDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKE 391
Score = 32.3 bits (72), Expect = 0.51
Identities = 42/200 (21%), Positives = 80/200 (40%), Gaps = 31/200 (15%)
Query: 34 RELEKQMEDAYRGTKRKMLPSSSSRMRSDGFDEESQRYYWRPKNEIS-GTLEDDFLKAKS 92
RE EK+ E RG +R + R + ++E +R R K + S G +E+ K
Sbjct: 354 REREKENE---RGRRRDR---DYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDK 407
Query: 93 WNKKFYDYEANMPDRWGHSGYKELYPEEFETDSSDQQDITNGKKTSPQVKSSTHESRKHK 152
+++ D + + HS + E S ++ ++ + KSS H++ +
Sbjct: 408 DDRRHRDDKRDSKKEKKHSRSRSR--ERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKE 465
Query: 153 KS-------------------KKSH---KKKQKKRSHKKQKKSKKEATDITADSSSEFSE 190
KS K+ H K+K +KRS K++ K++ +D S
Sbjct: 466 KSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRR 525
Query: 191 ETGASGTRKGKQPHKRKKKS 210
+ + ++ HK K ++
Sbjct: 526 RSQSIEQESQEKQHKNKDET 545
Score = 31.2 bits (69), Expect = 1.1
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 205 KRKKKSRKKSLKKPALFLEAESNTSHSDDSASSS----SEESEERDTKKTKRKKREKKAH 260
+R+ +S ++SL + S + H + SSS E +ER + + K+REK+
Sbjct: 257 RRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERR 316
Query: 261 TSVANNEIQERTNKRTNWKVATDERSAESSED 292
S + + ER R+ + + RS + D
Sbjct: 317 RSRSIDRGLERRRSRSRERHRSRSRSRDRKGD 348
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.302 0.118 0.321
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,967,817
Number of Sequences: 37866
Number of extensions: 507022
Number of successful extensions: 12400
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 720
Number of HSP's that attempted gapping in prelim test: 4328
Number of HSP's gapped (non-prelim): 4439
length of query: 293
length of database: 18,247,518
effective HSP length: 101
effective length of query: 192
effective length of database: 14,423,052
effective search space: 2769225984
effective search space used: 2769225984
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.