CHRNE 29899

Name: CHRNE	Sequence: fasta or formatted (493aa)		NCBI GI: 4557463
Description: nicotinic acetylcholine receptor epsilon polypeptide precursor		Referenced in: Acetylcholine
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.3 36 3 C cysteine 2.2 11 2 D aspartate 4.3 21 2 E glutamate 6.5 32 2 F phenylalanine 4.5 22 1 G glycine 6.7 33 2 H histidine 1.4 7 2 I isoleucine 6.3 31 2 K lysine 2.2 11 2 L leucine 12.2 60 4 M methionine 1.0 5 1 N asparagine 4.5 22 2 P proline 6.5 32 4 Q glutamine 2.8 14 1 R arginine 5.9 29 2 S serine 5.7 28 2 T threonine 5.7 28 2 V valine 9.5 47 2 W tryptophan 1.8 9 1 Y tyrosine 3.0 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nicotinic acetylcholine receptor epsilon polypeptide ... CHRNG 0.468 cholinergic receptor, nicotinic, gamma polypeptide p... CHRND 0.410 nicotinic acetylcholine receptor delta polypeptide pr... CHRNB1 0.335 nicotinic acetylcholine receptor beta 1 subunit prec... CHRNB2 0.291 neuronal nicotinic acetylcholine receptor beta 2 prec... CHRNB4 0.289 cholinergic receptor, nicotinic, beta 4 CHRNA3 0.284 cholinergic receptor, nicotinic, alpha 3 CHRNA2 0.281 cholinergic receptor, nicotinic, alpha polypeptide ... CHRNA6 0.273 cholinergic receptor, nicotinic, alpha 6 CHRNA4 0.258 cholinergic receptor, nicotinic, alpha 4 subunit prec... CHRNB3 0.258 cholinergic receptor, nicotinic, beta polypeptide 3 [... CHRNA1 0.240 nicotinic cholinergic receptor alpha 1 isoform b prec... CHRNA5 0.233 cholinergic receptor, nicotinic, alpha 5 CHRNA1 0.227 nicotinic cholinergic receptor alpha 1 isoform a pre... CHRNA9 0.211 cholinergic receptor, nicotinic, alpha 9 precursor [... CHRNA7 0.202 cholinergic receptor, nicotinic, alpha 7 precursor [H... CHRNA10 0.192 cholinergic receptor, nicotinic, alpha 10 HTR3A 0.145 5-hydroxytryptamine (serotonin) receptor 3A isoform... HTR3A 0.143 5-hydroxytryptamine (serotonin) receptor 3A isoform... HTR3A 0.130 5-hydroxytryptamine (serotonin) receptor 3A isoform... CHRFAM7A 0.127 CHRNA7-FAM7A fusion isoform 1 HTR3B 0.103 5-hydroxytryptamine (serotonin) receptor 3B precursor... HTR3E 0.088 5-hydroxytryptamine receptor 3 subunit E CHRFAM7A 0.084 CHRNA7-FAM7A fusion isoform 2 HTR3C 0.083 5-hydroxytryptamine receptor 3 subunit C GABRP 0.041 gamma-aminobutyric acid (GABA) A receptor, pi GLRB 0.038 glycine receptor, beta GABRB2 0.035 gamma-aminobutyric acid (GABA) A receptor, beta 2 iso... GABRB2 0.035 gamma-aminobutyric acid (GABA) A receptor, beta 2 is... GABRA1 0.035 gamma-aminobutyric acid (GABA) A receptor, alpha 1 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.