| Name: CHRNA1 | Sequence: fasta or formatted (457aa) | NCBI GI: 4557457 | |
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Description: nicotinic cholinergic receptor alpha 1 isoform b precursor
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Referenced in:
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Other entries for this name:
alt prot [482aa] nicotinic cholinergic receptor alpha 1 isoform a precursor | |||
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.5 16 3 C cysteine 1.5 7 2 D aspartate 5.0 23 2 E glutamate 5.0 23 1 F phenylalanine 5.0 23 2 G glycine 4.8 22 2 H histidine 2.8 13 2 I isoleucine 9.2 42 3 K lysine 5.7 26 2 L leucine 9.6 44 4 M methionine 3.3 15 1 N asparagine 3.7 17 2 P proline 6.1 28 3 Q glutamine 3.1 14 2 R arginine 2.6 12 1 S serine 7.4 34 2 T threonine 6.1 28 2 V valine 9.8 45 2 W tryptophan 2.2 10 1 Y tyrosine 3.3 15 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 nicotinic cholinergic receptor alpha 1 isoform b prec... CHRNA1 0.985 nicotinic cholinergic receptor alpha 1 isoform a pre... CHRNA3 0.466 cholinergic receptor, nicotinic, alpha 3 CHRNA2 0.441 cholinergic receptor, nicotinic, alpha polypeptide ... CHRNA6 0.439 cholinergic receptor, nicotinic, alpha 6 CHRNA4 0.414 cholinergic receptor, nicotinic, alpha 4 subunit prec... CHRNA5 0.400 cholinergic receptor, nicotinic, alpha 5 CHRNB2 0.388 neuronal nicotinic acetylcholine receptor beta 2 prec... CHRNB3 0.386 cholinergic receptor, nicotinic, beta polypeptide 3 [... CHRNB4 0.384 cholinergic receptor, nicotinic, beta 4 CHRNA7 0.320 cholinergic receptor, nicotinic, alpha 7 precursor [H... CHRNB1 0.319 nicotinic acetylcholine receptor beta 1 subunit prec... CHRNA9 0.311 cholinergic receptor, nicotinic, alpha 9 precursor [... CHRND 0.302 nicotinic acetylcholine receptor delta polypeptide pr... CHRNA10 0.298 cholinergic receptor, nicotinic, alpha 10 CHRNG 0.261 cholinergic receptor, nicotinic, gamma polypeptide p... CHRNE 0.258 nicotinic acetylcholine receptor epsilon polypeptide ... CHRFAM7A 0.221 CHRNA7-FAM7A fusion isoform 1 HTR3A 0.196 5-hydroxytryptamine (serotonin) receptor 3A isoform... HTR3A 0.195 5-hydroxytryptamine (serotonin) receptor 3A isoform... HTR3A 0.181 5-hydroxytryptamine (serotonin) receptor 3A isoform... CHRFAM7A 0.165 CHRNA7-FAM7A fusion isoform 2 HTR3E 0.116 5-hydroxytryptamine receptor 3 subunit E HTR3B 0.114 5-hydroxytryptamine (serotonin) receptor 3B precursor... HTR3C 0.108 5-hydroxytryptamine receptor 3 subunit C GLRA2 0.054 glycine receptor, alpha 2 isoform A GLRA2 0.054 glycine receptor, alpha 2 isoform A GLRA2 0.053 glycine receptor, alpha 2 isoform B GABRA2 0.052 gamma-aminobutyric acid A receptor, alpha 2 GABRA2 0.052 gamma-aminobutyric acid A receptor, alpha 2 precurs...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
