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Search of human proteins with 45387953
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45387953 potassium channel tetramerization domain containing
18 [Homo sapiens]
(426 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45387953 potassium channel tetramerization domain containing ... 862 0.0
gi|71143104 potassium channel tetramerisation domain containing ... 82 9e-16
gi|189571693 potassium channel tetramerisation domain containing... 75 1e-13
gi|189571691 potassium channel tetramerisation domain containing... 75 1e-13
gi|19923973 potassium channel tetramerisation domain containing ... 68 1e-11
gi|23308551 potassium channel tetramerisation domain containing ... 65 1e-10
gi|55926200 potassium channel tetramerisation domain containing ... 64 3e-10
gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo... 62 8e-10
gi|146198864 potassium channel tetramerisation domain containing... 62 8e-10
gi|13994353 potassium channel tetramerisation domain containing ... 61 2e-09
gi|38198663 potassium channel tetramerisation domain containing ... 60 4e-09
gi|39753959 potassium channel tetramerisation domain containing ... 55 9e-08
gi|40807368 potassium channel regulator isoform 2 [Homo sapiens] 55 1e-07
gi|27734697 potassium channel regulator isoform 1 [Homo sapiens] 55 1e-07
gi|218505694 potassium channel tetramerisation domain containing... 54 2e-07
gi|209969708 potassium channel tetramerisation domain containing... 54 2e-07
gi|40217617 potassium channel tetramerisation domain containing ... 54 2e-07
gi|46255026 potassium channel tetramerisation domain containing ... 54 2e-07
gi|30578412 potassium channel tetramerisation domain containing ... 54 2e-07
gi|169234778 potassium channel tetramerisation domain containing... 53 5e-07
gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens] 53 5e-07
gi|194018443 potassium channel tetramerisation domain containing... 52 8e-07
gi|194018441 potassium channel tetramerisation domain containing... 52 8e-07
gi|194018439 potassium channel tetramerisation domain containing... 52 8e-07
gi|9506651 potassium channel tetramerisation domain containing 5... 49 9e-06
gi|142356950 potassium channel tetramerisation domain containing... 49 9e-06
gi|53829365 potassium channel tetramerisation domain containing ... 47 3e-05
gi|169184031 PREDICTED: similar to potassium channel tetramerisa... 46 6e-05
gi|169179790 PREDICTED: similar to potassium channel tetramerisa... 46 6e-05
gi|169180181 PREDICTED: similar to potassium channel tetramerisa... 46 6e-05
>gi|45387953 potassium channel tetramerization domain containing 18
[Homo sapiens]
Length = 426
Score = 862 bits (2228), Expect = 0.0
Identities = 426/426 (100%), Positives = 426/426 (100%)
Query: 1 MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDR 60
MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDR
Sbjct: 1 MEGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDR 60
Query: 61 DGRLFKYLLDYLHGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNI 120
DGRLFKYLLDYLHGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNI
Sbjct: 61 DGRLFKYLLDYLHGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNI 120
Query: 121 ELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGR 180
ELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGR
Sbjct: 121 ELKKALTDFCDSYGLVCNKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGR 180
Query: 181 IHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEER 240
IHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEER
Sbjct: 181 IHSKGIFKREAGNNVQYIWSYYSVAELKKMMDAFDAWEGKGVSYWRVPHELIECWTLEER 240
Query: 241 PLLGSLRHMAPIRKRRLITFNEADESVNYKTGPKPVRFLGPSTSTQIKVKNSASVTVSPA 300
PLLGSLRHMAPIRKRRLITFNEADESVNYKTGPKPVRFLGPSTSTQIKVKNSASVTVSPA
Sbjct: 241 PLLGSLRHMAPIRKRRLITFNEADESVNYKTGPKPVRFLGPSTSTQIKVKNSASVTVSPA 300
Query: 301 SAIQTSAGATANRFQSGSRRKAAQRSAPSRATALVGTGAPGHPQASPGAASAENGGTHLP 360
SAIQTSAGATANRFQSGSRRKAAQRSAPSRATALVGTGAPGHPQASPGAASAENGGTHLP
Sbjct: 301 SAIQTSAGATANRFQSGSRRKAAQRSAPSRATALVGTGAPGHPQASPGAASAENGGTHLP 360
Query: 361 PAKVLLSDKKPTPQRVIKLKRTPLCATAPCLPSPTATRQANSLKPLPGEAARALGVRTEN 420
PAKVLLSDKKPTPQRVIKLKRTPLCATAPCLPSPTATRQANSLKPLPGEAARALGVRTEN
Sbjct: 361 PAKVLLSDKKPTPQRVIKLKRTPLCATAPCLPSPTATRQANSLKPLPGEAARALGVRTEN 420
Query: 421 GKNKGN 426
GKNKGN
Sbjct: 421 GKNKGN 426
>gi|71143104 potassium channel tetramerisation domain containing
21 [Homo sapiens]
Length = 260
Score = 82.0 bits (201), Expect = 9e-16
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDY 71
D + LNVGG +YT +L F DSML +MFSG+ P K D G C IDRDG++F+Y+L++
Sbjct: 3 DPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYILNF 62
Query: 72 LH-GEVQIPTDEQTRIALQEEADYFGI 97
L + +P D Q L+ EAD++ +
Sbjct: 63 LRTSHLDLPEDFQEMGLLRREADFYQV 89
>gi|189571693 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 75.1 bits (183), Expect = 1e-13
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDY 71
D + LNVGG +YT +L R+ DSML +MF G FP D G IDRDG LF+Y+L++
Sbjct: 12 DPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDRDGPLFRYVLNF 71
Query: 72 LH-GEVQIPTDEQTRIALQEEADYFGI-PYPYSLSD-HLANEMETYSLRSNIELKKALTD 128
L E+ +P D + L++EAD++ I P L+D M+T+ + + L+
Sbjct: 72 LRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEVVELSSTRKLSK 131
Query: 129 FCDSYGLVCNKPTV 142
+ + ++ + T+
Sbjct: 132 YSNPVAVIITQLTI 145
>gi|189571691 potassium channel tetramerisation domain containing 6
[Homo sapiens]
Length = 237
Score = 75.1 bits (183), Expect = 1e-13
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDY 71
D + LNVGG +YT +L R+ DSML +MF G FP D G IDRDG LF+Y+L++
Sbjct: 12 DPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDRDGPLFRYVLNF 71
Query: 72 LH-GEVQIPTDEQTRIALQEEADYFGI-PYPYSLSD-HLANEMETYSLRSNIELKKALTD 128
L E+ +P D + L++EAD++ I P L+D M+T+ + + L+
Sbjct: 72 LRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEVVELSSTRKLSK 131
Query: 129 FCDSYGLVCNKPTV 142
+ + ++ + T+
Sbjct: 132 YSNPVAVIITQLTI 145
>gi|19923973 potassium channel tetramerisation domain containing 12
[Homo sapiens]
Length = 325
Score = 68.2 bits (165), Expect = 1e-11
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFP--LKTDESGACVIDRDGRLFKYLL 69
D++ LNVGG +Y RR ++ DS+L MF+ + P L D G +DRDG LF+Y+L
Sbjct: 34 DIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQELARDSKGRFFLDRDGFLFRYIL 93
Query: 70 DYLHG-EVQIPTDEQTRIALQEEADYFGIP 98
DYL ++ +P R LQ EA+YF +P
Sbjct: 94 DYLRDLQLVLPDYFPERSRLQREAEYFELP 123
>gi|23308551 potassium channel tetramerisation domain containing 7
[Homo sapiens]
Length = 289
Score = 65.1 bits (157), Expect = 1e-10
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 8 EEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKY 67
+E +V+ LN+GG +T R +L ++D+MLA+MFSGR + TD G IDRDG F
Sbjct: 47 QEFPEVVPLNIGGAHFTTRLSTLRCYEDTMLAAMFSGRHYIPTDSEGRYFIDRDGTHFGD 106
Query: 68 LLDYLHGEVQIPTDEQTRIALQEEADYFGI 97
+L++L +P E+ R A+ +EA Y+ I
Sbjct: 107 VLNFLRSG-DLPPRERVR-AVYKEAQYYAI 134
>gi|55926200 potassium channel tetramerisation domain containing 16
[Homo sapiens]
Length = 428
Score = 63.9 bits (154), Expect = 3e-10
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 2 EGHKAEEEVLDVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFP----LKTDESGACV 57
+G +V+ LNVGG +Y R +L S+L MFS + L D G
Sbjct: 15 QGSAVPNSFPEVVELNVGGQVYFTRHSTLISIPHSLLWKMFSPKRDTANDLAKDSKGRFF 74
Query: 58 IDRDGRLFKYLLDYLHG-EVQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSL 116
IDRDG LF+Y+LDYL +V +P + L+ EA+YF +P + L
Sbjct: 75 IDRDGFLFRYILDYLRDRQVVLPDHFPEKGRLKREAEYFQLP-------------DLVKL 121
Query: 117 RSNIELKKALTDFCDS 132
+ E+K++ +FC S
Sbjct: 122 LTPDEIKQSPDEFCHS 137
>gi|10863937 tumor necrosis factor, alpha-induced protein 1 [Homo
sapiens]
Length = 316
Score = 62.4 bits (150), Expect = 8e-10
Identities = 46/130 (35%), Positives = 66/130 (50%), Gaps = 20/130 (15%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLH 73
++LNVGG +Y +L R D+ML +MFSGR + TD+ G +IDR G+ F +L+YL
Sbjct: 30 VQLNVGGSLYYTTVRALTRH-DTMLKAMFSGRMEVLTDKEGWILIDRCGKHFGTILNYLR 88
Query: 74 GE-VQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDS 132
+ + +P + Q L EA Y+ L L N ++ AL D DS
Sbjct: 89 DDTITLPQNRQEIKELMAEAKYY-------LIQGLVNMCQS-----------ALQDKKDS 130
Query: 133 YGLVCNKPTV 142
Y VCN P +
Sbjct: 131 YQPVCNIPII 140
>gi|146198864 potassium channel tetramerisation domain containing 4
[Homo sapiens]
Length = 259
Score = 62.4 bits (150), Expect = 8e-10
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 13 VLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYL 72
++ LNVGG +Y ++++L ++ D+ L + +G+ D G IDRDG LF+++L++L
Sbjct: 34 LMTLNVGGYLYITQKQTLTKYPDTFLEGIVNGKILCPFDADGHYFIDRDGLLFRHVLNFL 93
Query: 73 -HGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCD 131
+GE+ +P + L +EA++F + L++ + + E L +TD D
Sbjct: 94 RNGELLLPEGFRENQLLAQEAEFFQLK---GLAEEVKSRWEKEQLTPRETTFLEITDNHD 150
Query: 132 -SYGL--VCNKPTVWVLHYLNTSGASCESRIIGVYATKTDG 169
S GL CN P + +SRI+ V ++ DG
Sbjct: 151 RSQGLRIFCNAPDFI---------SKIKSRIVLVSKSRLDG 182
>gi|13994353 potassium channel tetramerisation domain containing 10
[Homo sapiens]
Length = 313
Score = 61.2 bits (147), Expect = 2e-09
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 11/192 (5%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLH 73
++LNVGG +Y ++L + +D+ML +MFSGR + TD G +IDR G+ F +L+YL
Sbjct: 34 VKLNVGGALYYTTMQTLTK-QDTMLKAMFSGRMEVLTDSEGWILIDRCGKHFGTILNYLR 92
Query: 74 -GEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHLANEMETYSLRSNIELKKALTDFCDS 132
G V +P + L EA Y+ + +TY + + +T +
Sbjct: 93 DGAVPLPESRREIEELLAEAKYYLVQGLVEECQAALQNKDTYEPFCKVPV---ITSSKEE 149
Query: 133 YGLVC--NKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEKQLGGRIHSKGIFKRE 190
L+ NKP V +L+ + + S S + D + + GR+ +F ++
Sbjct: 150 QKLIATSNKPAVKLLYNRSNNKYSYTSNSDDNMLKNIELFDKLSLRFNGRV----LFIKD 205
Query: 191 AGNNVQYIWSYY 202
+ WS+Y
Sbjct: 206 VIGDEICCWSFY 217
>gi|38198663 potassium channel tetramerisation domain containing 8
[Homo sapiens]
Length = 473
Score = 60.1 bits (144), Expect = 4e-09
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFP---------LKTDESGACVIDRDG 62
+V+ LNVGG +Y + +L DS LASMFS P L D IDRDG
Sbjct: 44 EVVELNVGGQVYVTKHSTLLSVPDSTLASMFSPSSPRGGARRRGELPRDSRARFFIDRDG 103
Query: 63 RLFKYLLDYLHG-EVQIPTDEQTRIALQEEADYF 95
LF+Y+LDYL ++ +P + L EA+YF
Sbjct: 104 FLFRYVLDYLRDKQLALPEHFPEKERLLREAEYF 137
>gi|39753959 potassium channel tetramerisation domain containing 9
[Homo sapiens]
Length = 389
Score = 55.5 bits (132), Expect = 9e-08
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 8/100 (8%)
Query: 12 DVLRLNVGGCIYTARRESLCRFK-DSMLASMFS--GRFPLKTDESGACVIDRDGRLFKYL 68
D L LNVGG +T R +L + DSMLA MF G + K D GA +IDR F+ +
Sbjct: 89 DWLTLNVGGRYFTTTRSTLVNKEPDSMLAHMFKDKGVWGNKQDHRGAFLIDRSPEYFEPI 148
Query: 69 LDYL-HGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHL 107
L+YL HG++ I D + + EEA +FGI SL +HL
Sbjct: 149 LNYLRHGQL-IVNDGINLLGVLEEARFFGID---SLIEHL 184
>gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]
Length = 229
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDY 71
+++ LNVGG I+T R ++ +F S LA M GR G +DRDG LF ++LD+
Sbjct: 5 ELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQEFKMVGGQIFVDRDGDLFSFILDF 64
Query: 72 LH-GEVQIPTDEQTRIALQEEADYF 95
L ++ +PT+ + LQ EA ++
Sbjct: 65 LRTHQLLLPTEFSDYLRLQREALFY 89
>gi|27734697 potassium channel regulator isoform 1 [Homo sapiens]
Length = 272
Score = 55.1 bits (131), Expect = 1e-07
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDY 71
+++ LNVGG I+T R ++ +F S LA M GR G +DRDG LF ++LD+
Sbjct: 5 ELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQEFKMVGGQIFVDRDGDLFSFILDF 64
Query: 72 LH-GEVQIPTDEQTRIALQEEADYF 95
L ++ +PT+ + LQ EA ++
Sbjct: 65 LRTHQLLLPTEFSDYLRLQREALFY 89
>gi|218505694 potassium channel tetramerisation domain containing 1
isoform b [Homo sapiens]
Length = 865
Score = 54.3 bits (129), Expect = 2e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDE-SGACVIDRDGRLFKYLLDYL 72
+ ++VGG +YT+ +L ++ +S + +F G P+ D IDRDG++F+Y+L++L
Sbjct: 640 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 699
Query: 73 H-GEVQIPTDEQTRIALQEEADYF 95
++ IP D + L EEA YF
Sbjct: 700 RTSKLLIPDDFKDYTLLYEEAKYF 723
>gi|209969708 potassium channel tetramerisation domain containing 1
isoform a [Homo sapiens]
Length = 257
Score = 54.3 bits (129), Expect = 2e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDE-SGACVIDRDGRLFKYLLDYL 72
+ ++VGG +YT+ +L ++ +S + +F G P+ D IDRDG++F+Y+L++L
Sbjct: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 91
Query: 73 H-GEVQIPTDEQTRIALQEEADYF 95
++ IP D + L EEA YF
Sbjct: 92 RTSKLLIPDDFKDYTLLYEEAKYF 115
>gi|40217617 potassium channel tetramerisation domain containing 1
isoform a [Homo sapiens]
Length = 257
Score = 54.3 bits (129), Expect = 2e-07
Identities = 29/84 (34%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDE-SGACVIDRDGRLFKYLLDYL 72
+ ++VGG +YT+ +L ++ +S + +F G P+ D IDRDG++F+Y+L++L
Sbjct: 32 VHIDVGGHMYTSSLATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFL 91
Query: 73 H-GEVQIPTDEQTRIALQEEADYF 95
++ IP D + L EEA YF
Sbjct: 92 RTSKLLIPDDFKDYTLLYEEAKYF 115
>gi|46255026 potassium channel tetramerisation domain containing 3
[Homo sapiens]
Length = 815
Score = 54.3 bits (129), Expect = 2e-07
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDY 71
++++LNVGG ++ R++L DS +S+ SGR DE+GA IDRD F +L++
Sbjct: 18 EIVQLNVGGTRFSTSRQTLMWIPDSFFSSLLSGRISTLRDETGAIFIDRDPAAFAPILNF 77
Query: 72 LHGEVQIPTDEQTRIALQEEADYFGI 97
L + ++ + L+ EA+++GI
Sbjct: 78 LRTK-ELDLRGVSINVLRHEAEFYGI 102
>gi|30578412 potassium channel tetramerisation domain containing 13
[Homo sapiens]
Length = 329
Score = 54.3 bits (129), Expect = 2e-07
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 28/201 (13%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYLH 73
++LNVGG ++ +L +D+ML +MFSGR + TD G +IDR GR F +L+YL
Sbjct: 43 VKLNVGGSLHYTTLRTLTG-QDTMLKAMFSGRVEVLTDAGGWVLIDRSGRHFGTILNYLR 101
Query: 74 -GEVQIPTDEQTRIALQEEADYF---GIPYPYSLSDHLANEMETYSLRSNIELKKALTDF 129
G V +P + L EA Y+ G+ L+ L + ET S I + +T
Sbjct: 102 DGSVPLPESTRELGELLGEARYYLVQGLIEDCQLA--LQQKRETLSPLCLIPM---VTSP 156
Query: 130 CDSYGLVC--NKPTVWVLHYLNTSGASCESRIIGVYATKTDGTDAIEK------QLGGRI 181
+ L+ +KP V +LH +R Y+ + D + K +L R
Sbjct: 157 REEQQLLASTSKPVVKLLH----------NRSNNKYSYTSTSDDNLLKNIELFDKLALRF 206
Query: 182 HSKGIFKREAGNNVQYIWSYY 202
H + +F ++ + WS+Y
Sbjct: 207 HGRLLFLKDVLGDEICCWSFY 227
>gi|169234778 potassium channel tetramerisation domain containing 17
[Homo sapiens]
Length = 297
Score = 53.1 bits (126), Expect = 5e-07
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSG-RFPLKTDESGACVIDRDGRLFKYLLDYL 72
+RLNVGG ++ R++LCR + S L+ + G DE+GA +IDRD F +L++L
Sbjct: 33 VRLNVGGTVFLTTRQTLCREQKSFLSRLCQGEELQSDRDETGAYLIDRDPTYFGPILNFL 92
Query: 73 -HGEVQIPTDEQTRIALQEEADYFGI 97
HG++ + D + EEA+++ I
Sbjct: 93 RHGKLVLDKD-MAEEGVLEEAEFYNI 117
>gi|223005950 SH3KBP1 binding protein 1 [Homo sapiens]
Length = 707
Score = 53.1 bits (126), Expect = 5e-07
Identities = 30/86 (34%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 12 DVLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDY 71
+V+ LNVGG ++ R++L DS +S+ SGR DE+GA IDRD +F +L++
Sbjct: 19 EVIHLNVGGKRFSTSRQTLTWIPDSFFSSLLSGRISTLKDETGAIFIDRDPTVFAPILNF 78
Query: 72 LHGEVQIPTDEQTRIALQEEADYFGI 97
L + P +L EA ++G+
Sbjct: 79 LRTKELDPRGVHGS-SLLHEAQFYGL 103
>gi|194018443 potassium channel tetramerisation domain containing 15
isoform 2 [Homo sapiens]
Length = 283
Score = 52.4 bits (124), Expect = 8e-07
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDE-SGACVIDRDGRLFKYLLDYL 72
+ ++VGG +YT+ +L ++ DS ++ +F+G P+ D IDRDG +F+Y+L +L
Sbjct: 58 VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYVLSFL 117
Query: 73 H-GEVQIPTDEQTRIALQEEADYF 95
++ +P D + L EEA Y+
Sbjct: 118 RTSKLLLPDDFKDFSLLYEEARYY 141
>gi|194018441 potassium channel tetramerisation domain containing 15
isoform 2 [Homo sapiens]
Length = 283
Score = 52.4 bits (124), Expect = 8e-07
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDE-SGACVIDRDGRLFKYLLDYL 72
+ ++VGG +YT+ +L ++ DS ++ +F+G P+ D IDRDG +F+Y+L +L
Sbjct: 58 VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYVLSFL 117
Query: 73 H-GEVQIPTDEQTRIALQEEADYF 95
++ +P D + L EEA Y+
Sbjct: 118 RTSKLLLPDDFKDFSLLYEEARYY 141
>gi|194018439 potassium channel tetramerisation domain containing 15
isoform 1 [Homo sapiens]
Length = 234
Score = 52.4 bits (124), Expect = 8e-07
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDE-SGACVIDRDGRLFKYLLDYL 72
+ ++VGG +YT+ +L ++ DS ++ +F+G P+ D IDRDG +F+Y+L +L
Sbjct: 58 VHIDVGGHMYTSSLATLTKYPDSRISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYVLSFL 117
Query: 73 H-GEVQIPTDEQTRIALQEEADYF 95
++ +P D + L EEA Y+
Sbjct: 118 RTSKLLLPDDFKDFSLLYEEARYY 141
>gi|9506651 potassium channel tetramerisation domain containing 5
[Homo sapiens]
Length = 234
Score = 48.9 bits (115), Expect = 9e-06
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTD--ESGACVIDRDGRLFKYLLDY 71
+RLNVGG + R++LCR S L + L +D E+GA +IDRD F +L+Y
Sbjct: 46 VRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDRDPTYFGPVLNY 105
Query: 72 L-HGEVQIPTDEQTRIALQEEADYFGI 97
L HG++ I D L EEA+++ I
Sbjct: 106 LRHGKLVINKDLAEEGVL-EEAEFYNI 131
>gi|142356950 potassium channel tetramerisation domain containing 14
[Homo sapiens]
Length = 255
Score = 48.9 bits (115), Expect = 9e-06
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 13 VLRLNVGGCIYTARRESLCRFKDSMLASMFSGRFPLKTDESGACVIDRDGRLFKYLLDYL 72
V+ LNVGG +T +L +F S LA MFS TD G IDR F+ +LDYL
Sbjct: 34 VVELNVGGEFHTTTLGTLRKFPGSKLAEMFSSLAKASTDAEGRFFIDRPSTYFRPILDYL 93
Query: 73 HGEVQIPTDEQTRIALQEEADYFGI 97
Q+PT + EA ++ I
Sbjct: 94 R-TGQVPTQHIPEV--YREAQFYEI 115
>gi|53829365 potassium channel tetramerisation domain containing 2
[Homo sapiens]
Length = 263
Score = 47.0 bits (110), Expect = 3e-05
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 14 LRLNVGGCIYTARRESLCRFKDSMLASMFSGRFP---LKTDESGACVIDRDGRLFKYLLD 70
+RLNVGG + R++L R S L + P DE+GA +IDRD F +L+
Sbjct: 74 VRLNVGGTYFVTTRQTLGREPKSFLCRLCCQEDPELDSDKDETGAYLIDRDPTYFGPILN 133
Query: 71 YLHGEVQIPTDEQTRIALQEEADYFGI 97
YL I T E + EEA+++ I
Sbjct: 134 YLRHGKLIITKELAEEGVLEEAEFYNI 160
>gi|169184031 PREDICTED: similar to potassium channel
tetramerisation domain containing 9 [Homo sapiens]
Length = 261
Score = 46.2 bits (108), Expect = 6e-05
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 12 DVLRLNVGGCIYTARRESLCRFK-DSMLASMFS--GRFPLKTDESGACVIDRDGRLFKYL 68
D L L+VGG +T +L + D MLA MF G + K D GA +ID+ F+ +
Sbjct: 89 DWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEYFEPI 148
Query: 69 LDYL-HGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHL 107
L+YL HG++ I D + + EEA +FGI SL +HL
Sbjct: 149 LNYLRHGQL-IVNDGIDLLGVLEEARFFGID---SLIEHL 184
>gi|169179790 PREDICTED: similar to potassium channel
tetramerisation domain containing 9 [Homo sapiens]
Length = 261
Score = 46.2 bits (108), Expect = 6e-05
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 12 DVLRLNVGGCIYTARRESLCRFK-DSMLASMFS--GRFPLKTDESGACVIDRDGRLFKYL 68
D L L+VGG +T +L + D MLA MF G + K D GA +ID+ F+ +
Sbjct: 89 DWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEYFEPI 148
Query: 69 LDYL-HGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHL 107
L+YL HG++ I D + + EEA +FGI SL +HL
Sbjct: 149 LNYLRHGQL-IVNDGIDLLGVLEEARFFGID---SLIEHL 184
>gi|169180181 PREDICTED: similar to potassium channel
tetramerisation domain containing 9 [Homo sapiens]
Length = 261
Score = 46.2 bits (108), Expect = 6e-05
Identities = 39/100 (39%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 12 DVLRLNVGGCIYTARRESLCRFK-DSMLASMFS--GRFPLKTDESGACVIDRDGRLFKYL 68
D L L+VGG +T +L + D MLA MF G + K D GA +ID+ F+ +
Sbjct: 89 DWLTLHVGGQYFTTTWSTLVNKEPDIMLAHMFKDKGVWGNKQDHRGAFLIDQSPEYFEPI 148
Query: 69 LDYL-HGEVQIPTDEQTRIALQEEADYFGIPYPYSLSDHL 107
L+YL HG++ I D + + EEA +FGI SL +HL
Sbjct: 149 LNYLRHGQL-IVNDGIDLLGVLEEARFFGID---SLIEHL 184
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,564,324
Number of Sequences: 37866
Number of extensions: 862180
Number of successful extensions: 4110
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 3920
Number of HSP's gapped (non-prelim): 311
length of query: 426
length of database: 18,247,518
effective HSP length: 105
effective length of query: 321
effective length of database: 14,271,588
effective search space: 4581179748
effective search space used: 4581179748
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.