Guide to the Human Genome
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Name: KCTD7 Sequence: fasta or formatted (289aa) NCBI GI: 23308551
Description:

potassium channel tetramerisation domain containing 7

Referenced in:

Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         20           2
 C cysteine            2.8          8           1
 D aspartate           6.6         19           2
 E glutamate           8.0         23           2
 F phenylalanine       4.8         14           1
 G glycine             5.9         17           2
 H histidine           3.8         11           2
 I isoleucine          3.5         10           1
 K lysine              3.8         11           1
 L leucine            10.4         30           2
 M methionine          2.4          7           1
 N asparagine          1.7          5           1
 P proline             6.2         18           2
 Q glutamine           3.8         11           1
 R arginine            7.3         21           2
 S serine              4.5         13           3
 T threonine           4.8         14           2
 V valine              7.3         21           3
 W tryptophan          1.0          3           2
 Y tyrosine            4.5         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   potassium channel tetramerisation domain containing ... 
KCTD14                0.205   potassium channel tetramerisation domain containing...
KCTD6                 0.116   potassium channel tetramerisation domain containing...
KCTD6                 0.116   potassium channel tetramerisation domain containing...
KCTD10                0.097   potassium channel tetramerisation domain containing ...
KCTD21                0.095   potassium channel tetramerisation domain containing ...
KCTD13                0.092   potassium channel tetramerisation domain containing ...
KCTD8                 0.087   potassium channel tetramerisation domain containing ...
SHKBP1                0.081   SH3KBP1 binding protein 1 
KCTD15                0.078   potassium channel tetramerisation domain containing...
KCTD15                0.078   potassium channel tetramerisation domain containing...
KCTD15                0.078   potassium channel tetramerisation domain containing...
TNFAIP1               0.076   tumor necrosis factor, alpha-induced protein 1 [Homo...
KCTD4                 0.076   potassium channel tetramerisation domain containing...
KCTD3                 0.073   potassium channel tetramerisation domain containing ...
KCTD18                0.069   potassium channel tetramerization domain containing ...
KCTD16                0.068   potassium channel tetramerisation domain containing ...
KCTD12                0.064   potassium channel tetramerisation domain containing ...
KCTD1                 0.064   potassium channel tetramerisation domain containing...
KCTD1                 0.064   potassium channel tetramerisation domain containing...
KCTD1                 0.064   potassium channel tetramerisation domain containing ...
KCTD17                0.064   potassium channel tetramerisation domain containing...
KCTD9                 0.059   potassium channel tetramerisation domain containing ...
KCND1                 0.054   potassium voltage-gated channel, Shal-related subfam...
KCNRG                 0.054   potassium channel regulator isoform 2 
KCNRG                 0.054   potassium channel regulator isoform 1 
KCTD11                0.050   potassium channel tetramerisation domain containing ...
KCTD5                 0.050   potassium channel tetramerisation domain containing 5...
LOC647013             0.047   PREDICTED: similar to potassium channel tetramerisa...
LOC647013             0.047   PREDICTED: similar to potassium channel tetramerisa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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