Guide to the Human Genome
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Name: WISP1 Sequence: fasta or formatted (367aa) NCBI GI: 4507921
Description:

WNT1 inducible signaling pathway protein 1 isoform 1 precursor

Referenced in:

Cardiovascular System

Other entries for this name:
alt prot [280aa] WNT1 inducible signaling pathway protein 1 isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         30           4
 C cysteine           10.4         38           2
 D aspartate           5.7         21           2
 E glutamate           3.5         13           1
 F phenylalanine       3.0         11           1
 G glycine             6.0         22           1
 H histidine           1.4          5           1
 I isoleucine          4.1         15           1
 K lysine              3.0         11           2
 L leucine             6.3         23           1
 M methionine          1.4          5           1
 N asparagine          4.4         16           2
 P proline             9.0         33           2
 Q glutamine           3.5         13           2
 R arginine            6.3         23           2
 S serine              6.8         25           2
 T threonine           5.7         21           2
 V valine              6.0         22           2
 W tryptophan          2.5          9           1
 Y tyrosine            3.0         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WNT1 inducible signaling pathway protein 1 isoform 1 ... 
WISP1                 0.426   WNT1 inducible signaling pathway protein 1 isoform 2...
CTGF                  0.391   connective tissue growth factor 
WISP3                 0.386   WNT1 inducible signaling pathway protein 3 isoform 3...
WISP3                 0.386   WNT1 inducible signaling pathway protein 3 isoform 1 ...
CYR61                 0.332   cysteine-rich, angiogenic inducer, 61 
NOV                   0.320   nephroblastoma overexpressed precursor 
WISP2                 0.211   WNT1 inducible signaling pathway protein 2 precursor ...
BMPER                 0.036   BMP-binding endothelial regulator precursor protein ...
SSPO                  0.033   SCO-spondin 
KCP                   0.030   cysteine rich BMP regulator 2 isoform 1 
KCP                   0.029   cysteine rich BMP regulator 2 isoform 2 
CRIM1                 0.028   cysteine-rich motor neuron 1 
MUC5AC                0.023   mucin 5AC 
IGFBP7                0.023   insulin-like growth factor binding protein 7 
LOC100131696          0.023   PREDICTED: keratin associated protein 
MUC5B                 0.023   mucin 5, subtype B, tracheobronchial 
THBS1                 0.022   thrombospondin 1 precursor 
KRTAP10-7             0.020   keratin associated protein 10-7 
LOC100290309          0.019   PREDICTED: hypothetical protein XP_002348012 
LOC100131696          0.019   PREDICTED: keratin associated protein 
LOC100288060          0.019   PREDICTED: hypothetical protein XP_002343557 
FCGBP                 0.019   Fc fragment of IgG binding protein 
LOC100293643          0.019   PREDICTED: similar to Fc fragment of IgG binding pr...
VWCE                  0.019   von Willebrand factor C and EGF domains 
SLIT2                 0.018   slit homolog 2 
CHRDL1                0.018   chordin-like 1 isoform 3 precursor 
CHRDL1                0.018   chordin-like 1 isoform 2 precursor 
CHRDL1                0.018   chordin-like 1 isoform 1 precursor 
CHRDL2                0.018   chordin-like 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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