Search of human proteins with 4506869

Search of human proteins with 4506869

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4506869 secreted and transmembrane 1 precursor [Homo
sapiens]
         (248 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4506869 secreted and transmembrane 1 precursor [Homo sapiens]      508   e-144
gi|58197558 tudor domain containing 6 [Homo sapiens]                   35   0.046
gi|157057547 Fc receptor-like 6 [Homo sapiens]                         33   0.30 
gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3...    32   0.67 
gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2...    32   0.67 
gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1...    32   0.67 
gi|119943125 G protein-coupled receptor 64 isoform 3 [Homo sapiens]    32   0.67 
gi|119943116 G protein-coupled receptor 64 isoform 2 [Homo sapiens]    32   0.67 
gi|119943120 G protein-coupled receptor 64 isoform 1 [Homo sapiens]    32   0.67 
gi|119943129 G protein-coupled receptor 64 isoform 4 [Homo sapiens]    32   0.67 
gi|33359221 dyslexia susceptibility 2-like [Homo sapiens]              30   1.5  
gi|8923887 zinc finger protein 395 [Homo sapiens]                      30   1.5  
gi|56711322 ring finger protein 43 [Homo sapiens]                      30   1.5  
gi|181336739 multiple EGF-like-domains 11 [Homo sapiens]               30   1.5  
gi|144226847 obscurin-like 1 [Homo sapiens]                            29   3.3  
gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]               29   3.3  
gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchan...    29   4.3  
gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]             28   5.7  
gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]             28   5.7  
gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]             28   5.7  
gi|134288915 myosin IIIB isoform 1 [Homo sapiens]                      28   5.7  
gi|134288892 myosin IIIB isoform 2 [Homo sapiens]                      28   5.7  
gi|203098816 pyruvate dehydrogenase complex, component X isoform...    28   5.7  
gi|203098753 pyruvate dehydrogenase complex, component X isoform...    28   5.7  
gi|19923901 hypothetical protein LOC91523 [Homo sapiens]               28   5.7  
gi|71274178 developing brain homeobox 1 [Homo sapiens]                 28   5.7  
gi|32189371 transmembrane protein 165 [Homo sapiens]                   28   7.4  
gi|142976733 surface glycoprotein, Ig superfamily member [Homo s...    28   7.4  
gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]        28   9.7  
gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]         28   9.7  

>gi|4506869 secreted and transmembrane 1 precursor [Homo sapiens]
          Length = 248

 Score =  508 bits (1308), Expect = e-144
 Identities = 248/248 (100%), Positives = 248/248 (100%)

Query: 1   MQTCPLAFPGHVSQALGTLLFLAASLSAQNEGWDSPICTEGVVSVSWGENTVMSCNISNA 60
           MQTCPLAFPGHVSQALGTLLFLAASLSAQNEGWDSPICTEGVVSVSWGENTVMSCNISNA
Sbjct: 1   MQTCPLAFPGHVSQALGTLLFLAASLSAQNEGWDSPICTEGVVSVSWGENTVMSCNISNA 60

Query: 61  FSHVNIKLRAHGQESAIFNEVAPGYFSRDGWQLQVQGGVAQLVIKGARDSHAGLYMWHLV 120
           FSHVNIKLRAHGQESAIFNEVAPGYFSRDGWQLQVQGGVAQLVIKGARDSHAGLYMWHLV
Sbjct: 61  FSHVNIKLRAHGQESAIFNEVAPGYFSRDGWQLQVQGGVAQLVIKGARDSHAGLYMWHLV 120

Query: 121 GHQRNNRQVTLEVSGAEPQSAPDTGFWPVPAVVTAVFILLVALVMFAWYRCRCSQQRREK 180
           GHQRNNRQVTLEVSGAEPQSAPDTGFWPVPAVVTAVFILLVALVMFAWYRCRCSQQRREK
Sbjct: 121 GHQRNNRQVTLEVSGAEPQSAPDTGFWPVPAVVTAVFILLVALVMFAWYRCRCSQQRREK 180

Query: 181 KFFLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQP 240
           KFFLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQP
Sbjct: 181 KFFLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQP 240

Query: 241 LFPYAADP 248
           LFPYAADP
Sbjct: 241 LFPYAADP 248


>gi|58197558 tudor domain containing 6 [Homo sapiens]
          Length = 2096

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%)

Query: 116 MWHLVGHQRNNRQVTLEVSGAEPQSAPDTGFWPVPAVVTAVFILLVALVMFAWYRCR-CS 174
           +W LVG +R      L +S    ++A   G W + +   +   L +  V   W+RCR  S
Sbjct: 32  LWGLVGERRGEY---LRLSREIQEAAATRGQWALGSASASPGELCLVQVGLLWHRCRVVS 88

Query: 175 QQRREKKFFLLEPQMKVAA 193
           +Q +E + FLL+    + A
Sbjct: 89  RQAQESRVFLLDEGRTITA 107


>gi|157057547 Fc receptor-like 6 [Homo sapiens]
          Length = 434

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 2/59 (3%)

Query: 86  FSRDGWQLQVQGGVAQLVIKGARDSHAGLYMWHLV--GHQRNNRQVTLEVSGAEPQSAP 142
           F +DG  LQ +G   +L I GA++  +GLY   +   G Q   +   LEV    P S P
Sbjct: 149 FHKDGHTLQDRGPHPELCIPGAKEGDSGLYWCEVAPEGGQVQKQSPQLEVRVQAPVSRP 207


>gi|68800350 interleukin-1 receptor-associated kinase 1 isoform 3
           [Homo sapiens]
          Length = 633

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 185 LEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLFPY 244
           L P    +   +G + GL  + A LW P   P P       KP P  ++ LL     FP+
Sbjct: 143 LSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSST----KPGPESSVSLLQGARPFPF 198


>gi|68800343 interleukin-1 receptor-associated kinase 1 isoform 2
           [Homo sapiens]
          Length = 682

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 185 LEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLFPY 244
           L P    +   +G + GL  + A LW P   P P       KP P  ++ LL     FP+
Sbjct: 143 LSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSST----KPGPESSVSLLQGARPFPF 198


>gi|68800243 interleukin-1 receptor-associated kinase 1 isoform 1
           [Homo sapiens]
          Length = 712

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 185 LEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLFPY 244
           L P    +   +G + GL  + A LW P   P P       KP P  ++ LL     FP+
Sbjct: 143 LSPAFPGSQTHSGPELGLVPSPASLWPPPPSPAPSST----KPGPESSVSLLQGARPFPF 198


>gi|119943125 G protein-coupled receptor 64 isoform 3 [Homo sapiens]
          Length = 995

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 195 RAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLFPYAADP 248
           RA     + +A++    PD  P    +     PSP+G ++ LSPQP  P A+ P
Sbjct: 244 RATVLSQVPKATSFAEPPDYSPVTHNV-----PSPIGEIQPLSPQPSAPIASSP 292


>gi|119943116 G protein-coupled receptor 64 isoform 2 [Homo sapiens]
          Length = 1003

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 195 RAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLFPYAADP 248
           RA     + +A++    PD  P    +     PSP+G ++ LSPQP  P A+ P
Sbjct: 252 RATVLSQVPKATSFAEPPDYSPVTHNV-----PSPIGEIQPLSPQPSAPIASSP 300


>gi|119943120 G protein-coupled receptor 64 isoform 1 [Homo sapiens]
          Length = 1017

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 195 RAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLFPYAADP 248
           RA     + +A++    PD  P    +     PSP+G ++ LSPQP  P A+ P
Sbjct: 266 RATVLSQVPKATSFAEPPDYSPVTHNV-----PSPIGEIQPLSPQPSAPIASSP 314


>gi|119943129 G protein-coupled receptor 64 isoform 4 [Homo sapiens]
          Length = 1014

 Score = 31.6 bits (70), Expect = 0.67
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 5/54 (9%)

Query: 195 RAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLFPYAADP 248
           RA     + +A++    PD  P    +     PSP+G ++ LSPQP  P A+ P
Sbjct: 263 RATVLSQVPKATSFAEPPDYSPVTHNV-----PSPIGEIQPLSPQPSAPIASSP 311


>gi|33359221 dyslexia susceptibility 2-like [Homo sapiens]
          Length = 1049

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 12/80 (15%)

Query: 147  WPVPAVVTAVFILLVALVMFAW-YRCRCSQQ----RREKKFFLLEP------QMKVAALR 195
            W V  V+ A F+++VAL + +W   C C +Q    +R+ K+ +L+       ++K  + R
Sbjct: 928  WSVLYVIIATFVIVVALGILSWTVICCCKRQKGKPKRKSKYKILDATDQESLELKPTS-R 986

Query: 196  AGAQQGLSRASAELWTPDSE 215
            AG +Q     S+ L   +SE
Sbjct: 987  AGIKQKGLLLSSSLMHSESE 1006


>gi|8923887 zinc finger protein 395 [Homo sapiens]
          Length = 513

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%)

Query: 175 QQRREKKFFLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRP----LALVFKPSPL 230
           Q +RE+ F+  E Q+K  +  A A    +  +    TP SEP P P    L L   P PL
Sbjct: 314 QFKREEDFYYTEVQLKEES--AAAAAAAAAGTPVPGTPTSEPAPTPSMTGLPLSALPPPL 371

Query: 231 GALELLSPQPLFPYAADP 248
              +   P+   P ++ P
Sbjct: 372 HKAQSSGPEHPGPESSLP 389


>gi|56711322 ring finger protein 43 [Homo sapiens]
          Length = 783

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 126 NRQVTLEVSGAEPQSAPDTGFWPVPAVVTAVFILLVALVMFAWYRCRCSQQRREKKFFLL 185
           N++  + +   EP + PD   W +  VV  +F++++A V+    R RC  +         
Sbjct: 179 NQKAHVRIELKEPPAWPDYDVWILMTVVGTIFVIILASVL----RIRCRPRHSRPDPLQQ 234

Query: 186 EPQMKVAALRAGAQQGLSRASAELWTPDS 214
                ++ L     Q   R +   W PDS
Sbjct: 235 RTAWAISQLATRRYQASCRQARGEW-PDS 262


>gi|181336739 multiple EGF-like-domains 11 [Homo sapiens]
          Length = 1044

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 41/165 (24%), Positives = 63/165 (38%), Gaps = 29/165 (17%)

Query: 32  GWDSPICTEGVVSVSWGENTVMSCNISNAFS--HVNIKLRAH----GQESAIFNEVAPGY 85
           GW    CT+   +  +G++    C   N  S  H++ K        GQ        APG 
Sbjct: 730 GWTGLFCTQRCPAAFFGKDCGRVCQCQNGASCDHISGKCTCRTGFTGQHCE--QRCAPGT 787

Query: 86  FSRDGWQL----------QVQGGV-AQLVIKGARDSHAGLYMWHLVGHQRNNRQVTLEVS 134
           F     QL           V G        KG R   A L M  L  + + +  +     
Sbjct: 788 FGYGCQQLCECMNNSTCDHVTGTCYCSPGFKGIRCDQAALMMEELNPYTKISPAL----- 842

Query: 135 GAEPQSAPDTGFWPVPAVVTAVFILLVALVMFAWYRCRCSQQRRE 179
           GAE  S        V  ++  +F+++V L +FAW+R R  ++ R+
Sbjct: 843 GAERHSVG-----AVTGIMLLLFLIVVLLGLFAWHRRRQKEKGRD 882


>gi|144226847 obscurin-like 1 [Homo sapiens]
          Length = 1896

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 18/81 (22%)

Query: 35   SPICTEGVVSVSWGENTVMSCNISNAFSHVNIKLRAHGQESAIFNEVAPGYFSRDGWQLQ 94
            SP+C      V+ GE  V+SC +S A + V            +++         +G +L 
Sbjct: 1181 SPLC------VAPGEPVVLSCELSRAGAPV------------VWSHNGRPVQEGEGLELH 1222

Query: 95   VQGGVAQLVIKGARDSHAGLY 115
             +G    L I+ A  +HAGLY
Sbjct: 1223 AEGPRRVLCIQAAGPAHAGLY 1243


>gi|145275174 kin of IRRE-like 2 isoform c [Homo sapiens]
          Length = 708

 Score = 29.3 bits (64), Expect = 3.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 216 PTPRPLALVFKPSPLGALELLSPQPLFPYAADP 248
           P PR      KP+  G  +L    P FPYAA P
Sbjct: 665 PHPRAFTSYIKPTSFGPPDLAPGTPPFPYAAFP 697


>gi|239753316 PREDICTED: similar to Rho guanine nucleotide exchange
           factor 4 [Homo sapiens]
          Length = 368

 Score = 28.9 bits (63), Expect = 4.3
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 5/82 (6%)

Query: 2   QTCPLAFPGHVSQALGTLLFLAASLSAQNEGWDSPICTEGVVSVSWGENTVMSCNISNAF 61
           Q CP    G  S  LGT    +A LS    G DS   + GVV    G N  M   +S ++
Sbjct: 222 QQCPSESSGQTSGDLGTSSSSSAGLS---PGSDSD--SSGVVCGGRGGNGGMRGAVSRSW 276

Query: 62  SHVNIKLRAHGQESAIFNEVAP 83
           S  +++    G+++AI    AP
Sbjct: 277 SLESLRSATAGKDAAIPAPHAP 298


>gi|239756397 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 212

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 172 RCSQQRREKKFFLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPT---PRPLALV 224
           R +Q R E K  LLE Q +V  L     +G  +  A    P  EPT   P P  LV
Sbjct: 86  RLAQDREEMKVNLLEMQGQVLRLVRDHNEGHGKFLATAQNPADEPTLGAPAPQELV 141


>gi|239750920 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 421

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 172 RCSQQRREKKFFLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPT---PRPLALV 224
           R +Q R E K  LLE Q +V  L     +G  +  A    P  EPT   P P  LV
Sbjct: 296 RLAQDREEMKVNLLEMQGQVLRLVRDHNEGHGKFLATAQNPADEPTLGAPAPQELV 351


>gi|239745318 PREDICTED: similar to hCG27445 [Homo sapiens]
          Length = 421

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 172 RCSQQRREKKFFLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPT---PRPLALV 224
           R +Q R E K  LLE Q +V  L     +G  +  A    P  EPT   P P  LV
Sbjct: 296 RLAQDREEMKVNLLEMQGQVLRLVRDHNEGHGKFLATAQNPADEPTLGAPAPQELV 351


>gi|134288915 myosin IIIB isoform 1 [Homo sapiens]
          Length = 1314

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 219 RPLALVFKPSPLGALELLSPQPLFPYAAD 247
           RPL  +F   PLG L LL  +  FP A D
Sbjct: 778 RPLLDMFLQKPLGLLALLDEESRFPQATD 806


>gi|134288892 myosin IIIB isoform 2 [Homo sapiens]
          Length = 1341

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 14/29 (48%), Positives = 16/29 (55%)

Query: 219 RPLALVFKPSPLGALELLSPQPLFPYAAD 247
           RPL  +F   PLG L LL  +  FP A D
Sbjct: 778 RPLLDMFLQKPLGLLALLDEESRFPQATD 806


>gi|203098816 pyruvate dehydrogenase complex, component X isoform 2
           [Homo sapiens]
          Length = 486

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 213 DSEPTPRPLALVFKPSPLGALELLS-PQPLFPYAADP 248
           +S PTP P A    PSPL A    S P+P+ P  + P
Sbjct: 215 ESRPTPAPTATPTAPSPLQATAGPSYPRPVIPPVSTP 251


>gi|203098753 pyruvate dehydrogenase complex, component X isoform 1
           [Homo sapiens]
          Length = 501

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 213 DSEPTPRPLALVFKPSPLGALELLS-PQPLFPYAADP 248
           +S PTP P A    PSPL A    S P+P+ P  + P
Sbjct: 230 ESRPTPAPTATPTAPSPLQATAGPSYPRPVIPPVSTP 266


>gi|19923901 hypothetical protein LOC91523 [Homo sapiens]
          Length = 432

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 199 QQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQP 240
           Q   +  +  L  P   PT RPL L F P  L  L LLSPQP
Sbjct: 280 QANRNHPALPLSPPLPSPTYRPL-LGFPPQRLPLLPLLSPQP 320


>gi|71274178 developing brain homeobox 1 [Homo sapiens]
          Length = 382

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 9/101 (8%)

Query: 142 PDTGFWPVPAVVTAVFILLVALVMFAWYRCRCSQQRREKKFFLLEPQMKVAALRAGAQQG 201
           P T  WP+ A       +L   V F+  + +  ++  +K+ ++ +P  K  A + G +  
Sbjct: 165 PGTFSWPLAARGKPRRGMLRRAV-FSDVQRKALEKMFQKQKYISKPDRKKLAAKLGLKDS 223

Query: 202 LSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSPQPLF 242
              A      PDS P PR        SP GA +L S  P F
Sbjct: 224 QDTARRTEPAPDSTPRPR-------ASP-GAPDLTSASPFF 256


>gi|32189371 transmembrane protein 165 [Homo sapiens]
          Length = 324

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 183 FLLEPQMKVAALRAGAQQGLSRASAELWTPDSEPTPRPLALVFKPSPLGALELLSP-QPL 241
           FL+      AA+RAG  + LS  + E   P  +  P+P+A V  P P    ++ +P  P+
Sbjct: 20  FLVPLLWAPAAVRAGPDEDLSHRNKEPPAPAQQLQPQPVA-VQGPEPARVEKIFTPAAPV 78

Query: 242 FPYAADP 248
                DP
Sbjct: 79  HTNKEDP 85


>gi|142976733 surface glycoprotein, Ig superfamily member [Homo
           sapiens]
          Length = 1264

 Score = 28.1 bits (61), Expect = 7.4
 Identities = 33/140 (23%), Positives = 53/140 (37%), Gaps = 27/140 (19%)

Query: 26  LSAQNEGWDSPICTEGVVS--VSWGENTVMSCNISNA--------------FSHVNIKLR 69
           L  +N+G   P+     VS  V+ G+   +SCN S                 SH +  LR
Sbjct: 395 LEIENDGGFKPVIITAPVSAKVADGDFVTLSCNASGLPVPVIRWYDSHGLITSHPSQVLR 454

Query: 70  AHGQESAIFN----EVAPGYFSRDGWQLQVQGGVAQLVIKGARDSHAGLYMWHLVG-HQR 124
           +  ++S +       + P YF      +  Q G + L I+     HAG Y+      H  
Sbjct: 455 SKSRKSQLSRPEGLNLEPVYF------VLSQAGASSLHIQAVTQEHAGKYICEAANEHGT 508

Query: 125 NNRQVTLEVSGAEPQSAPDT 144
              + +L V   E  +  +T
Sbjct: 509 TQAEASLMVVPFETNTKAET 528


>gi|46358426 myelin protein zero-like 1 isoform b [Homo sapiens]
          Length = 209

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 39  TEGVVSVSWGENTVMSCNISNAFSHVNIKLRAHGQESAIFNEVAPGYFSRDGWQLQVQGG 98
           T G+ SVSW      +    + F         H  +  ++    P +  R  W   +   
Sbjct: 66  TGGLTSVSWSFQPEGADTTVSFF---------HYSQGQVYLGNYPPFKDRISWAGDLDKK 116

Query: 99  VAQLVIKGARDSHAGLYMWHLVGHQRNNRQVTLEVSG-----AEPQSAPDTGFWPVPAVV 153
            A + I+  +  H G Y+  +    +N   + ++         E ++ P    W V  +V
Sbjct: 117 DASINIENMQFIHNGTYICDV----KNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIV 172

Query: 154 TAVFI---LLVALVMFAWYRCRCSQQ 176
           TAV +   LL+++++   YR + S++
Sbjct: 173 TAVVLGLTLLISMILAVLYRRKNSKR 198


>gi|4506357 myelin protein zero-like 1 isoform a [Homo sapiens]
          Length = 269

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 30/146 (20%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 39  TEGVVSVSWGENTVMSCNISNAFSHVNIKLRAHGQESAIFNEVAPGYFSRDGWQLQVQGG 98
           T G+ SVSW      +    + F         H  +  ++    P +  R  W   +   
Sbjct: 66  TGGLTSVSWSFQPEGADTTVSFF---------HYSQGQVYLGNYPPFKDRISWAGDLDKK 116

Query: 99  VAQLVIKGARDSHAGLYMWHLVGHQRNNRQVTLEVSG-----AEPQSAPDTGFWPVPAVV 153
            A + I+  +  H G Y+  +    +N   + ++         E ++ P    W V  +V
Sbjct: 117 DASINIENMQFIHNGTYICDV----KNPPDIVVQPGHIRLYVVEKENLPVFPVWVVVGIV 172

Query: 154 TAVFI---LLVALVMFAWYRCRCSQQ 176
           TAV +   LL+++++   YR + S++
Sbjct: 173 TAVVLGLTLLISMILAVLYRRKNSKR 198


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,062,403
Number of Sequences: 37866
Number of extensions: 458681
Number of successful extensions: 1377
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1355
Number of HSP's gapped (non-prelim): 40
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.