Guide to the Human Genome
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Name: KIRREL2 Sequence: fasta or formatted (708aa) NCBI GI: 145275174
Description:

kin of IRRE-like 2 isoform c

Not currently referenced in the text

Other entries for this name:
alt prot {633aa} kin of IRRE-like 2 isoform a
alt prot {583aa} kin of IRRE-like 2 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         69           3
 C cysteine            2.0         14           2
 D aspartate           3.8         27           2
 E glutamate           5.4         38           4
 F phenylalanine       3.7         26           1
 G glycine            10.6         75           3
 H histidine           2.3         16           1
 I isoleucine          1.7         12           1
 K lysine              1.6         11           1
 L leucine            11.2         79           2
 M methionine          0.7          5           1
 N asparagine          1.7         12           1
 P proline             9.9         70           3
 Q glutamine           3.2         23           2
 R arginine            7.1         50           2
 S serine              8.2         58           3
 T threonine           6.5         46           3
 V valine              7.5         53           2
 W tryptophan          1.6         11           1
 Y tyrosine            1.8         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kin of IRRE-like 2 isoform c 
KIRREL2               0.850   kin of IRRE-like 2 isoform a 
KIRREL2               0.759   kin of IRRE-like 2 isoform b 
KIRREL3               0.293   kin of IRRE like 3 isoform 1 
KIRREL                0.288   kin of IRRE like 
KIRREL3               0.283   kin of IRRE like 3 isoform 2 
NPHS1                 0.070   nephrin precursor 
HMCN1                 0.070   hemicentin 1 
LOC100292387          0.063   PREDICTED: similar to hemicentin 2 
HMCN2                 0.063   PREDICTED: hemicentin 2 
HMCN2                 0.061   PREDICTED: hemicentin 2 
ROBO3                 0.058   roundabout, axon guidance receptor, homolog 3 
HMCN2                 0.058   PREDICTED: hemicentin 2 
LOC100289200          0.053   PREDICTED: hypothetical protein XP_002342997 
CADM4                 0.053   cell adhesion molecule 4 
HSPG2                 0.052   heparan sulfate proteoglycan 2 
PTK7                  0.049   PTK7 protein tyrosine kinase 7 isoform a precursor [...
PTK7                  0.049   PTK7 protein tyrosine kinase 7 isoform d precursor [...
PTK7                  0.049   PTK7 protein tyrosine kinase 7 isoform b precursor [...
ROBO1                 0.047   roundabout 1 isoform d 
ROBO1                 0.047   roundabout 1 isoform c 
LOC642132             0.047   PREDICTED: similar to roundabout 1 isoform 1 
LOC642132             0.047   PREDICTED: similar to roundabout 1 isoform 2 
ROBO2                 0.046   roundabout, axon guidance receptor, homolog 2 isofo...
PXDN                  0.046   peroxidasin 
SIGLEC1               0.046   sialoadhesin precursor 
ROBO2                 0.045   roundabout, axon guidance receptor, homolog 2 isofor...
IGDCC3                0.043   putative neuronal cell adhesion molecule 
PTK7                  0.043   PTK7 protein tyrosine kinase 7 isoform c precursor [...
MAG                   0.042   myelin associated glycoprotein isoform a precursor [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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