SATB1 29405

Name: SATB1	Sequence: fasta or formatted (763aa)		NCBI GI: 4506791
Description: special AT-rich sequence binding protein 1		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt mRNA [763aa] special AT-rich sequence binding protein 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 53 2 C cysteine 0.8 6 1 D aspartate 4.2 32 1 E glutamate 7.6 58 3 F phenylalanine 2.0 15 2 G glycine 4.1 31 1 H histidine 2.9 22 3 I isoleucine 3.8 29 2 K lysine 5.8 44 2 L leucine 10.1 77 2 M methionine 2.6 20 2 N asparagine 5.5 42 2 P proline 7.6 58 4 Q glutamine 9.8 75 15 R arginine 4.6 35 2 S serine 7.9 60 2 T threonine 4.6 35 2 V valine 5.9 45 2 W tryptophan 0.9 7 1 Y tyrosine 2.5 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 special AT-rich sequence binding protein 1 SATB1 1.000 special AT-rich sequence binding protein 1 SATB2 0.554 SATB homeobox 2 HTT 0.021 huntingtin TNRC6A 0.020 trinucleotide repeat containing 6A MED12 0.020 mediator complex subunit 12 MEF2A 0.019 myocyte enhancer factor 2A isoform 4 MEF2A 0.019 myocyte enhancer factor 2A isoform 3 MEF2A 0.019 myocyte enhancer factor 2A isoform 2 MEF2A 0.019 myocyte enhancer factor 2A isoform 1 KCNN3 0.019 small conductance calcium-activated potassium chann... ESX1 0.019 extraembryonic, spermatogenesis, homeobox 1-like [Ho... FOXP2 0.018 forkhead box P2 isoform I FOXP2 0.018 forkhead box P2 isoform III FOXP2 0.018 forkhead box P2 isoform II MAML2 0.017 mastermind-like 2 ZFHX4 0.017 zinc finger homeodomain 4 ATXN2 0.017 ataxin 2 SMARCA2 0.017 SWI/SNF-related matrix-associated actin-dependent re... SMARCA2 0.017 SWI/SNF-related matrix-associated actin-dependent re... CHERP 0.017 calcium homeostasis endoplasmic reticulum protein [... POU6F2 0.017 POU domain, class 6, transcription factor 2 C14orf43 0.016 hypothetical protein LOC91748 C14orf43 0.016 hypothetical protein LOC91748 MAML3 0.016 mastermind-like 3 TBP 0.015 TATA box binding protein NCOA6 0.015 nuclear receptor coactivator 6 NCOA3 0.015 nuclear receptor coactivator 3 isoform a NCOA3 0.015 nuclear receptor coactivator 3 isoform b MED15 0.015 mediator complex subunit 15 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.