Guide to the Human Genome
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Name: RNMT Sequence: fasta or formatted (476aa) NCBI GI: 4506567
Description:

RNA (guanine-7-) methyltransferase

Referenced in:

Capping and Splicing

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         24           2
 C cysteine            2.5         12           1
 D aspartate           5.9         28           2
 E glutamate          10.9         52           2
 F phenylalanine       4.8         23           1
 G glycine             4.8         23           2
 H histidine           0.8          4           1
 I isoleucine          3.8         18           1
 K lysine             11.6         55           3
 L leucine             7.8         37           2
 M methionine          2.5         12           2
 N asparagine          5.3         25           2
 P proline             2.9         14           1
 Q glutamine           3.8         18           2
 R arginine            4.8         23           2
 S serine              8.4         40           3
 T threonine           4.2         20           2
 V valine              5.5         26           2
 W tryptophan          0.6          3           1
 Y tyrosine            4.0         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RNA (guanine-7-) methyltransferase 
FAM133B               0.015   hypothetical protein LOC257415 isoform 2 
FAM133B               0.015   hypothetical protein LOC257415 isoform 1 
DDX46                 0.013   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
BRD3                  0.013   bromodomain containing protein 3 
SDCCAG10              0.013   serologically defined colon cancer antigen 10 
NSBP1                 0.013   nucleosomal binding protein 1 
ATRX                  0.012   transcriptional regulator ATRX isoform 2 
ATRX                  0.012   transcriptional regulator ATRX isoform 1 
ANKRD11               0.012   ankyrin repeat domain 11 
MYH2                  0.012   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.012   myosin, heavy chain 2, skeletal muscle, adult [Homo...
RBBP6                 0.012   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.012   retinoblastoma-binding protein 6 isoform 1 
BOD1L                 0.011   biorientation of chromosomes in cell division 1-like...
SMC1A                 0.011   structural maintenance of chromosomes 1A 
FHAD1                 0.011   forkhead-associated (FHA) phosphopeptide binding do...
EIF5B                 0.011   eukaryotic translation initiation factor 5B 
PHF20                 0.011   PHD finger protein 20 
FAM133A               0.011   hypothetical protein LOC286499 
COQ3                  0.011   hexaprenyldihydroxybenzoate methyltransferase [Homo...
EEA1                  0.011   early endosome antigen 1, 162kD 
TP53TG5               0.011   TP53-target gene 5 protein 
SMTNL1                0.011   smoothelin-like 1 
PSIP1                 0.011   PC4 and SFRS1 interacting protein 1 isoform 2 [Homo...
PSIP1                 0.011   PC4 and SFRS1 interacting protein 1 isoform 1 [Homo...
PSIP1                 0.011   PC4 and SFRS1 interacting protein 1 isoform 2 
FAM178A               0.011   hypothetical protein LOC55719 isoform 1 
FAM178A               0.011   hypothetical protein LOC55719 isoform 2 
BAT2D1                0.011   HBxAg transactivated protein 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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