RFXAP 29316

Name: RFXAP	Sequence: fasta or formatted (272aa)		NCBI GI: 4506501
Description: regulatory factor X-associated protein		Referenced in: HLA and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.5 34 4 C cysteine 2.2 6 1 D aspartate 4.4 12 1 E glutamate 8.1 22 3 F phenylalanine 1.5 4 1 G glycine 12.5 34 3 H histidine 1.1 3 1 I isoleucine 0.7 2 1 K lysine 6.2 17 4 L leucine 8.1 22 2 M methionine 2.2 6 1 N asparagine 2.2 6 1 P proline 5.9 16 2 Q glutamine 7.7 21 3 R arginine 4.4 12 3 S serine 8.8 24 2 T threonine 4.8 13 2 V valine 4.8 13 2 W tryptophan 0.4 1 1 Y tyrosine 1.5 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 regulatory factor X-associated protein PER1 0.042 period 1 RPGR 0.033 retinitis pigmentosa GTPase regulator isoform C [Hom... IQSEC3 0.029 IQ motif and Sec7 domain 3 CASZ1 0.029 castor homolog 1, zinc finger isoform a NKX1-1 0.027 PREDICTED: NK1 homeobox 1 NKX1-1 0.027 PREDICTED: HPX-153 homeobox FMN2 0.027 formin 2 LOC100293136 0.027 PREDICTED: hypothetical protein LOC100290831 0.027 PREDICTED: hypothetical protein XP_002347799 LOC100287562 0.027 PREDICTED: hypothetical protein XP_002343591 MARCKS 0.027 myristoylated alanine-rich protein kinase C substra... SHANK1 0.027 SH3 and multiple ankyrin repeat domains 1 ARMCX2 0.025 ALEX2 protein ARMCX2 0.025 ALEX2 protein DGKI 0.025 diacylglycerol kinase, iota MYLK3 0.025 myosin light chain kinase 3 SMPD3 0.023 neutral sphingomyelin phosphodiesterase 3 FOXP2 0.023 forkhead box P2 isoform I FOXP2 0.023 forkhead box P2 isoform III FOXP2 0.023 forkhead box P2 isoform II SART1 0.023 squamous cell carcinoma antigen recognized by T cell... APOB48R 0.023 apolipoprotein B48 receptor CACNA1I 0.023 calcium channel, voltage-dependent, T type, alpha 1I... ZNF703 0.021 zinc finger protein 703 SALL3 0.021 sal-like 3 BHLHE22 0.021 basic helix-loop-helix domain containing, class B, 5... LOC100294444 0.021 PREDICTED: similar to family with sequence similari... FAM48B2 0.021 family with sequence similarity 48, member B2 [Homo... TNKS1BP1 0.021 tankyrase 1-binding protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.