PRPF18 29226

Name: PRPF18	Sequence: fasta or formatted (342aa)		NCBI GI: 4506123
Description: PRP18 pre-mRNA processing factor 18 homolog		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 18 2 C cysteine 0.9 3 1 D aspartate 5.8 20 2 E glutamate 11.1 38 3 F phenylalanine 2.9 10 1 G glycine 5.0 17 2 H histidine 1.8 6 1 I isoleucine 6.4 22 2 K lysine 10.2 35 2 L leucine 11.4 39 2 M methionine 2.0 7 1 N asparagine 4.4 15 1 P proline 3.8 13 1 Q glutamine 5.0 17 2 R arginine 7.3 25 2 S serine 3.5 12 2 T threonine 4.7 16 2 V valine 4.7 16 1 W tryptophan 0.6 2 1 Y tyrosine 3.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PRP18 pre-mRNA processing factor 18 homolog PPL 0.020 periplakin LAMA2 0.017 laminin alpha 2 subunit isoform b precursor LAMA2 0.017 laminin alpha 2 subunit isoform a precursor SMC3 0.015 structural maintenance of chromosomes 3 DYX1C1 0.015 dyslexia susceptibility 1 candidate 1 isoform c [Hom... DYX1C1 0.015 dyslexia susceptibility 1 candidate 1 isoform b [Hom... DYX1C1 0.015 dyslexia susceptibility 1 candidate 1 isoform a [Hom... GCC2 0.015 GRIP and coiled-coil domain-containing 2 TRIP11 0.015 thyroid hormone receptor interactor 11 KIF16B 0.015 kinesin-like motor protein C20orf23 TCHH 0.014 trichohyalin GLRX5 0.014 glutaredoxin 5 FILIP1 0.014 filamin A interacting protein 1 SWAP70 0.012 SWAP-70 protein ANKRD12 0.012 ankyrin repeat domain 12 isoform 2 ANKRD12 0.012 ankyrin repeat domain 12 isoform 1 SGSM3 0.012 small G protein signaling modulator 3 PPFIA1 0.012 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.012 PTPRF interacting protein alpha 1 isoform b EIF3CL 0.012 eukaryotic translation initiation factor 3, subunit... EIF3C 0.012 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.012 eukaryotic translation initiation factor 3, subunit C... PITX2 0.011 paired-like homeodomain transcription factor 2 isofo... SPC24 0.011 spindle pole body component 24 homolog PITX2 0.011 paired-like homeodomain transcription factor 2 isofo... PITX2 0.011 paired-like homeodomain transcription factor 2 isofo... STK10 0.011 serine/threonine kinase 10 ALS2CL 0.011 ALS2 C-terminal like isoform 1 C10orf118 0.011 CTCL tumor antigen L14-2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.