PHF1 29135

Name: PHF1	Sequence: fasta or formatted (457aa)		NCBI GI: 4505777
Description: PHD finger protein 1 isoform a		Referenced in: PHD Finger Proteins
Other entries for this name: alt prot [567aa] PHD finger protein 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 40 3 C cysteine 4.8 22 2 D aspartate 4.2 19 2 E glutamate 6.3 29 3 F phenylalanine 2.6 12 1 G glycine 10.1 46 2 H histidine 2.2 10 1 I isoleucine 1.3 6 1 K lysine 4.8 22 3 L leucine 11.4 52 3 M methionine 1.1 5 1 N asparagine 1.3 6 1 P proline 8.8 40 3 Q glutamine 3.5 16 2 R arginine 6.8 31 2 S serine 8.1 37 2 T threonine 4.4 20 1 V valine 4.8 22 2 W tryptophan 2.6 12 1 Y tyrosine 2.2 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PHD finger protein 1 isoform a PHF1 0.774 PHD finger protein 1 isoform b MTF2 0.387 metal response element binding transcription factor 2... PHF19 0.377 PHD finger protein 19 isoform a PHF19 0.115 PHD finger protein 19 isoform b PHF16 0.031 PHD finger protein 16 PHF16 0.031 PHD finger protein 16 PHF15 0.029 PHD finger protein 15 INTS12 0.029 integrator complex subunit 12 INTS12 0.029 integrator complex subunit 12 BRPF1 0.028 bromodomain and PHD finger-containing protein 1 isof... BRPF1 0.028 bromodomain and PHD finger-containing protein 1 isof... MLL 0.027 myeloid/lymphoid or mixed-lineage leukemia protein [... PHF17 0.027 PHD finger protein 17 short isoform PHF17 0.027 PHD finger protein 17 long isoform MLL4 0.025 myeloid/lymphoid or mixed-lineage leukemia 4 CSRP2BP 0.024 CSRP2 binding protein isoform a BRD1 0.023 bromodomain containing protein 1 HCN2 0.021 hyperpolarization activated cyclic nucleotide-gated... BRPF3 0.020 bromodomain and PHD finger containing, 3 LOC100130884 0.019 PREDICTED: hypothetical protein LOC100130884 0.019 PREDICTED: hypothetical protein LOC100130884 0.019 PREDICTED: hypothetical protein SP140 0.019 SP140 nuclear body protein isoform 1 SP140L 0.019 SP140 nuclear body protein-like LOC728804 0.019 PREDICTED: hypothetical protein LOC100293055 0.017 PREDICTED: similar to COL22A1 protein TRIM24 0.017 transcriptional intermediary factor 1 alpha isoform ... TRIM24 0.017 transcriptional intermediary factor 1 alpha isoform ... COL22A1 0.017 collagen, type XXII, alpha 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.