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Search of human proteins with 13027822
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]
(202 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13027822 growth hormone 2 isoform 4 [Homo sapiens] 407 e-114
gi|4503991 growth hormone 2 isoform 1 [Homo sapiens] 397 e-111
gi|13027814 growth hormone 1 isoform 2 [Homo sapiens] 375 e-104
gi|13027812 growth hormone 1 isoform 1 [Homo sapiens] 365 e-101
gi|13027816 growth hormone 1 isoform 3 [Homo sapiens] 315 2e-86
gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Hom... 315 2e-86
gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo... 313 8e-86
gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1... 288 2e-78
gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2... 281 3e-76
gi|13027824 growth hormone 2 isoform 2 [Homo sapiens] 265 2e-71
gi|13027826 growth hormone 2 isoform 3 [Homo sapiens] 258 3e-69
gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4... 206 1e-53
gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Hom... 196 1e-50
gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3... 195 3e-50
gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Hom... 194 4e-50
gi|239756908 PREDICTED: similar to chorionic somatomammotropin h... 164 6e-41
gi|13027818 growth hormone 1 isoform 4 [Homo sapiens] 134 7e-32
gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Hom... 125 2e-29
gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Hom... 125 2e-29
gi|4506105 prolactin precursor [Homo sapiens] 61 7e-10
gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens] 32 0.48
gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens] 32 0.48
gi|33359221 dyslexia susceptibility 2-like [Homo sapiens] 28 4.1
gi|12383066 axotrophin [Homo sapiens] 28 4.1
gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo ... 28 6.9
gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo s... 28 6.9
>gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]
Length = 202
Score = 407 bits (1045), Expect = e-114
Identities = 202/202 (100%), Positives = 202/202 (100%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFNPQ 60
MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFNPQ
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFNPQ 60
Query: 61 TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSN 120
TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSN
Sbjct: 61 TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSN 120
Query: 121 VYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKD 180
VYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKD
Sbjct: 121 VYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKD 180
Query: 181 MDKVETFLRIVQCRSVEGSCGF 202
MDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 MDKVETFLRIVQCRSVEGSCGF 202
>gi|4503991 growth hormone 2 isoform 1 [Homo sapiens]
Length = 217
Score = 397 bits (1019), Expect = e-111
Identities = 202/217 (93%), Positives = 202/217 (93%), Gaps = 15/217 (6%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 165
SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 180
Query: 166 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 217
>gi|13027814 growth hormone 1 isoform 2 [Homo sapiens]
Length = 202
Score = 375 bits (963), Expect = e-104
Identities = 188/202 (93%), Positives = 192/202 (95%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFNPQ 60
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEFNPQ
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNPQ 60
Query: 61 TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSN 120
TSLCFSESIPTPSNR +TQQKSNLELLRISLLLIQSWLEPVQ LRSVFANSLVYGASDSN
Sbjct: 61 TSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSN 120
Query: 121 VYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKD 180
VY LKDLEEGIQTLM RLEDGSPRTGQIF Q+YSKFDT SHNDDALLKNYGLLYCFRKD
Sbjct: 121 VYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKD 180
Query: 181 MDKVETFLRIVQCRSVEGSCGF 202
MDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 MDKVETFLRIVQCRSVEGSCGF 202
>gi|13027812 growth hormone 1 isoform 1 [Homo sapiens]
Length = 217
Score = 365 bits (937), Expect = e-101
Identities = 188/217 (86%), Positives = 192/217 (88%), Gaps = 15/217 (6%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEA 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
NPQTSLCFSESIPTPSNR +TQQKSNLELLRISLLLIQSWLEPVQ LR
Sbjct: 61 YIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 165
SVFANSLVYGASDSNVY LKDLEEGIQTLM RLEDGSPRTGQIF Q+YSKFDT SHNDD
Sbjct: 121 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 180
Query: 166 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 217
>gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]
Length = 177
Score = 315 bits (807), Expect = 2e-86
Identities = 165/202 (81%), Positives = 168/202 (83%), Gaps = 25/202 (12%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFNPQ 60
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEFN
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFN-- 58
Query: 61 TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSN 120
LELLRISLLLIQSWLEPVQ LRSVFANSLVYGASDSN
Sbjct: 59 -----------------------LELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSN 95
Query: 121 VYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKD 180
VY LKDLEEGIQTLM RLEDGSPRTGQIF Q+YSKFDT SHNDDALLKNYGLLYCFRKD
Sbjct: 96 VYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKD 155
Query: 181 MDKVETFLRIVQCRSVEGSCGF 202
MDKVETFLRIVQCRSVEGSCGF
Sbjct: 156 MDKVETFLRIVQCRSVEGSCGF 177
>gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Homo
sapiens]
Length = 217
Score = 315 bits (806), Expect = 2e-86
Identities = 163/217 (75%), Positives = 177/217 (81%), Gaps = 15/217 (6%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
+ QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 165
S+FAN+LVY SDS+ Y LKDLEEGIQTLM RLEDGS RTGQI Q+YSKFDT SHN D
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
Query: 166 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
>gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo
sapiens]
Length = 217
Score = 313 bits (801), Expect = 8e-86
Identities = 162/217 (74%), Positives = 176/217 (81%), Gaps = 15/217 (6%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
+ QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 165
S+FAN+LVY SDS+ Y LKDLEEGIQTLM RLEDGS RTGQI Q+YSKFDT SHN D
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
Query: 166 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
>gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1
precursor [Homo sapiens]
Length = 222
Score = 288 bits (738), Expect = 2e-78
Identities = 154/222 (69%), Positives = 167/222 (75%), Gaps = 20/222 (9%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLF AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 58 -----------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEP 100
+ QTS CFS+SIPT SN +TQQKSNLELL ISLLLI+S LEP
Sbjct: 61 WGMEAYITKEQKYSFLHDSQTSFCFSDSIPTSSNMEETQQKSNLELLHISLLLIESRLEP 120
Query: 101 VQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTK 160
V+ LRS F N+LVY SDS+ Y LKDLEEGIQ LM RLEDGS TGQ Q+YSKFDT
Sbjct: 121 VRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTN 180
Query: 161 SHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
SHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 SHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVEGSCGF 222
>gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2
precursor [Homo sapiens]
Length = 199
Score = 281 bits (718), Expect = 3e-76
Identities = 148/202 (73%), Positives = 161/202 (79%), Gaps = 3/202 (1%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFNPQ 60
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLF AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 61 TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSN 120
+ +SIPT SN +TQQKSNLELL ISLLLI+S LEPV+ LRS F N+LVY SDS+
Sbjct: 61 WGM---DSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSD 117
Query: 121 VYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKD 180
Y LKDLEEGIQ LM RLEDGS TGQ Q+YSKFDT SHN DALLKNYGLL+CFRKD
Sbjct: 118 DYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKD 177
Query: 181 MDKVETFLRIVQCRSVEGSCGF 202
MDKVETFLR+VQCRSVEGSCGF
Sbjct: 178 MDKVETFLRMVQCRSVEGSCGF 199
>gi|13027824 growth hormone 2 isoform 2 [Homo sapiens]
Length = 256
Score = 265 bits (678), Expect = 2e-71
Identities = 141/163 (86%), Positives = 142/163 (87%), Gaps = 16/163 (9%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMW-RLEDGSPRTG 147
SVFANSLVYGASDSNVYRHLKDLEEGIQTLMW R+ G P G
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWVRVAPGIPNPG 163
>gi|13027826 growth hormone 2 isoform 3 [Homo sapiens]
Length = 245
Score = 258 bits (658), Expect = 3e-69
Identities = 136/155 (87%), Positives = 139/155 (89%), Gaps = 16/155 (10%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLM-WRL 139
SVFANSLVYGASDSNVYRHLKDLEEGIQTL+ W++
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLIGWKM 155
>gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4
[Homo sapiens]
Length = 139
Score = 206 bits (524), Expect = 1e-53
Identities = 105/137 (76%), Positives = 115/137 (83%)
Query: 66 SESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHL 125
++SIPT SN +TQQKSNLELL ISLLLI+S LEPV+ LRS F N+LVY SDS+ Y L
Sbjct: 3 ADSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLL 62
Query: 126 KDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVE 185
KDLEEGIQ LM RLEDGS TGQ Q+YSKFDT SHN DALLKNYGLL+CFRKDMDKVE
Sbjct: 63 KDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVE 122
Query: 186 TFLRIVQCRSVEGSCGF 202
TFLR+VQCRSVEGSCGF
Sbjct: 123 TFLRMVQCRSVEGSCGF 139
>gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Homo
sapiens]
Length = 167
Score = 196 bits (498), Expect = 1e-50
Identities = 105/151 (69%), Positives = 117/151 (77%), Gaps = 15/151 (9%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
+ QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLM 136
S+FAN+LVY SDS+ Y LKDLEEGIQTLM
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLM 151
>gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3
[Homo sapiens]
Length = 128
Score = 195 bits (495), Expect = 3e-50
Identities = 99/126 (78%), Positives = 107/126 (84%)
Query: 77 KTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM 136
+TQQKSNLELL ISLLLI+S LEPV+ LRS F N+LVY SDS+ Y LKDLEEGIQ LM
Sbjct: 3 ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 62
Query: 137 WRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 196
RLEDGS TGQ Q+YSKFDT SHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSV
Sbjct: 63 GRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSV 122
Query: 197 EGSCGF 202
EGSCGF
Sbjct: 123 EGSCGF 128
>gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Homo
sapiens]
Length = 256
Score = 194 bits (493), Expect = 4e-50
Identities = 104/151 (68%), Positives = 116/151 (76%), Gaps = 15/151 (9%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 ------------NPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 105
+ QTS CFS+SIPTPSN +TQQKSNLELLRISLLLI+SWLEPV+ LR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 106 SVFANSLVYGASDSNVYRHLKDLEEGIQTLM 136
S+FAN+LVY SDS+ Y LKDLEEGIQTLM
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLM 151
>gi|239756908 PREDICTED: similar to chorionic somatomammotropin
hormone 2 [Homo sapiens]
Length = 96
Score = 164 bits (414), Expect = 6e-41
Identities = 80/96 (83%), Positives = 85/96 (88%)
Query: 107 VFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDA 166
+FAN+LVY SDS+ Y LKDLEEGIQTLM RLEDGS RTGQI Q+YSKFDT SHN DA
Sbjct: 1 MFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDA 60
Query: 167 LLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 202
LLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 61 LLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 96
>gi|13027818 growth hormone 1 isoform 4 [Homo sapiens]
Length = 122
Score = 134 bits (336), Expect = 7e-32
Identities = 62/66 (93%), Positives = 64/66 (96%)
Query: 137 WRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 196
+RLEDGSPRTGQIF Q+YSKFDT SHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV
Sbjct: 57 FRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 116
Query: 197 EGSCGF 202
EGSCGF
Sbjct: 117 EGSCGF 122
Score = 108 bits (271), Expect = 2e-24
Identities = 55/73 (75%), Positives = 61/73 (83%), Gaps = 5/73 (6%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF--- 57
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFRLE 60
Query: 58 --NPQTSLCFSES 68
+P+T F ++
Sbjct: 61 DGSPRTGQIFKQT 73
>gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Homo
sapiens]
Length = 122
Score = 125 bits (314), Expect = 2e-29
Identities = 70/122 (57%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 82 SNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM-WRLE 140
S LL LL WL+ +++V + L D + + + + I T +RLE
Sbjct: 5 SRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF----DHAMLQAHRAHQLAIDTYQEFRLE 60
Query: 141 DGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSC 200
DGS RTGQI Q+YSKFDT SHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSC
Sbjct: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
Query: 201 GF 202
GF
Sbjct: 121 GF 122
Score = 87.8 bits (216), Expect = 6e-18
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF 57
MA GSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Homo
sapiens]
Length = 122
Score = 125 bits (314), Expect = 2e-29
Identities = 70/122 (57%), Positives = 82/122 (67%), Gaps = 5/122 (4%)
Query: 82 SNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSNVYRHLKDLEEGIQTLM-WRLE 140
S LL LL WL+ +++V + L D + + + + I T +RLE
Sbjct: 5 SRTSLLLAFALLCLPWLQEAGAVQTVPLSRLF----DHAMLQAHRAHQLAIDTYQEFRLE 60
Query: 141 DGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSC 200
DGS RTGQI Q+YSKFDT SHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSC
Sbjct: 61 DGSRRTGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSC 120
Query: 201 GF 202
GF
Sbjct: 121 GF 122
Score = 89.7 bits (221), Expect = 1e-18
Identities = 44/57 (77%), Positives = 48/57 (84%)
Query: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEF 57
MAAGSRTSLLLAF LLCL WLQE A T+PLSRLFD+AML+A R +QLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEF 57
>gi|4506105 prolactin precursor [Homo sapiens]
Length = 227
Score = 60.8 bits (146), Expect = 7e-10
Identities = 50/221 (22%), Positives = 103/221 (46%), Gaps = 30/221 (13%)
Query: 4 GSRTSLLLAFGLLC-----LSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFN 58
GS LL++ LLC L G+A + L LFD A++ + ++ L+ + + EF+
Sbjct: 10 GSLLLLLVSNLLLCQSVAPLPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFD 69
Query: 59 PQ-----------TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLL--- 104
+ + C + S+ TP ++ + QQ + + L + + +++SW EP+ L
Sbjct: 70 KRYTHGRGFITKAINSCHTSSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYHLVTE 129
Query: 105 -RSVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFD----- 158
R + + + K L EG++ ++ ++ P T + N+ Y +
Sbjct: 130 VRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVSQVH---PETKE--NEIYPVWSGLPSL 184
Query: 159 TKSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGS 199
+ + L Y LL+C R+D K++ +L++++CR + +
Sbjct: 185 QMADEESRLSAYYNLLHCLRRDSHKIDNYLKLLKCRIIHNN 225
>gi|164698517 MAM domain containing 1 isoform 1 [Homo sapiens]
Length = 956
Score = 31.6 bits (70), Expect = 0.48
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 132 IQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYC 176
+ T WRL + RTGQ +Q Y+++ KS +++ NYG+ C
Sbjct: 571 VLTYEWRLGNKLLRTGQFDSQEYTEYAVKSLSNE----NYGVYNC 611
>gi|38158013 MAM domain containing 1 isoform 2 [Homo sapiens]
Length = 727
Score = 31.6 bits (70), Expect = 0.48
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Query: 132 IQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYC 176
+ T WRL + RTGQ +Q Y+++ KS +++ NYG+ C
Sbjct: 342 VLTYEWRLGNKLLRTGQFDSQEYTEYAVKSLSNE----NYGVYNC 382
>gi|33359221 dyslexia susceptibility 2-like [Homo sapiens]
Length = 1049
Score = 28.5 bits (62), Expect = 4.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 129 EEGIQTLMWRLEDGSPRTGQIFNQS 153
++GI + +W ++GSP G++ N S
Sbjct: 720 DKGIVSYLWTRDEGSPAAGEVLNHS 744
>gi|12383066 axotrophin [Homo sapiens]
Length = 704
Score = 28.5 bits (62), Expect = 4.1
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 109 ANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDA 166
++S+V G+ +++ R +DLE + + L D S R+G SY + S++ A
Sbjct: 127 SSSMVLGSFGTDLMRERRDLERRTDSSISNLMDYSHRSGDFTTSSYVQDRVPSYSQGA 184
>gi|217416332 trinucleotide repeat containing 6C isoform 1 [Homo
sapiens]
Length = 1726
Score = 27.7 bits (60), Expect = 6.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 115 GASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLL 174
GA+ S+V + EGI +W L G+P TG N +S+ + + N K G
Sbjct: 227 GANGSSVSQVSGGSAEGISNSVWGLSPGNPATGN-SNSGFSQGNGDTVNSALSAKQNGSS 285
Query: 175 YCFRKD 180
+K+
Sbjct: 286 SAVQKE 291
>gi|33413425 trinucleotide repeat containing 6C isoform 2 [Homo
sapiens]
Length = 1690
Score = 27.7 bits (60), Expect = 6.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 115 GASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLL 174
GA+ S+V + EGI +W L G+P TG N +S+ + + N K G
Sbjct: 227 GANGSSVSQVSGGSAEGISNSVWGLSPGNPATGN-SNSGFSQGNGDTVNSALSAKQNGSS 285
Query: 175 YCFRKD 180
+K+
Sbjct: 286 SAVQKE 291
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,413,705
Number of Sequences: 37866
Number of extensions: 290077
Number of successful extensions: 637
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 597
Number of HSP's gapped (non-prelim): 29
length of query: 202
length of database: 18,247,518
effective HSP length: 97
effective length of query: 105
effective length of database: 14,574,516
effective search space: 1530324180
effective search space used: 1530324180
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.