Guide to the Human Genome
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Name: GH2 Sequence: fasta or formatted (256aa) NCBI GI: 13027824
Description:

growth hormone 2 isoform 2

Referenced in:

Growth Hormone and Related Hormones
Ovary, Uterus and Placenta

Other entries for this name:
alt prot [202aa] growth hormone 2 isoform 4
alt prot [245aa] growth hormone 2 isoform 3
alt prot [217aa] growth hormone 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         18           2
 C cysteine            2.0          5           2
 D aspartate           2.7          7           1
 E glutamate           6.2         16           2
 F phenylalanine       4.3         11           1
 G glycine             5.9         15           2
 H histidine           1.2          3           1
 I isoleucine          2.7          7           1
 K lysine              2.7          7           1
 L leucine            15.6         40           3
 M methionine          1.6          4           1
 N asparagine          3.9         10           1
 P proline             7.8         20           2
 Q glutamine           7.4         19           2
 R arginine            5.5         14           2
 S serine             10.2         26           2
 T threonine           3.1          8           1
 V valine              3.9         10           1
 W tryptophan          3.1          8           1
 Y tyrosine            3.1          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   growth hormone 2 isoform 2 
CSH1                  0.770   chorionic somatomammotropin hormone 1 isoform 2 [Hom...
GH2                   0.557   growth hormone 2 isoform 1 
GH2                   0.555   growth hormone 2 isoform 3 
GH1                   0.499   growth hormone 1 isoform 1 
GH2                   0.479   growth hormone 2 isoform 4 
CSH2                  0.453   chorionic somatomammotropin hormone 2 isoform 2 [Hom...
GH1                   0.427   growth hormone 1 isoform 2 
CSH2                  0.405   chorionic somatomammotropin hormone 2 isoform 1 [Hom...
CSH1                  0.401   chorionic somatomammotropin hormone 1 isoform 1 [Homo...
CSHL1                 0.357   chorionic somatomammotropin hormone-like 1 isoform 1...
GH1                   0.315   growth hormone 1 isoform 3 
CSHL1                 0.277   chorionic somatomammotropin hormone-like 1 isoform 2...
GH1                   0.164   growth hormone 1 isoform 4 
CSHL1                 0.138   chorionic somatomammotropin hormone-like 1 isoform 4...
CSH2                  0.130   chorionic somatomammotropin hormone 2 isoform 3 [Hom...
CSH1                  0.126   chorionic somatomammotropin hormone 1 isoform 3 [Hom...
CSHL1                 0.116   chorionic somatomammotropin hormone-like 1 isoform 3...
PRL                   0.042   prolactin precursor 
LOC100293689          0.040   PREDICTED: similar to chorionic somatomammotropin h...
GH1                   0.038   growth hormone 1 isoform 5 
SPERT                 0.014   spermatid associated 
PCDHGC3               0.014   protocadherin gamma subfamily C, 3 isoform 1 precurs...
SON                   0.010   SON DNA-binding protein isoform F 
SON                   0.010   SON DNA-binding protein isoform B 
LOC100293575          0.008   PREDICTED: hypothetical protein 
LOC100290681          0.008   PREDICTED: hypothetical protein XP_002346859 
LOC100287330          0.008   PREDICTED: hypothetical protein XP_002342702 
SAMD1                 0.008   sterile alpha motif domain containing 1 
PCDHGC3               0.006   protocadherin gamma subfamily C, 3 isoform 2 precurs...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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