Guide to the Human Genome
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Name: KITLG Sequence: fasta or formatted (273aa) NCBI GI: 4505175
Description:

KIT ligand isoform b precursor

Referenced in:

Neutrophils, Eosinophils, and Basophils
Hematopoiesis and Erythrocytes
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [245aa] KIT ligand isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         13           2
 C cysteine            1.8          5           1
 D aspartate           6.2         17           2
 E glutamate           6.6         18           2
 F phenylalanine       5.1         14           2
 G glycine             2.2          6           1
 H histidine           0.7          2           1
 I isoleucine          5.9         16           2
 K lysine              8.1         22           2
 L leucine            10.6         29           3
 M methionine          2.6          7           1
 N asparagine          5.9         16           2
 P proline             5.5         15           2
 Q glutamine           2.6          7           1
 R arginine            4.0         11           1
 S serine             11.4         31           4
 T threonine           4.8         13           1
 V valine              8.1         22           2
 W tryptophan          1.5          4           1
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIT ligand isoform b precursor 
KITLG                 0.867   KIT ligand isoform a precursor 
PDZRN4                0.014   PDZ domain containing RING finger 4 
HDGF2                 0.014   hepatoma-derived growth factor-related protein 2 iso...
HDGF2                 0.014   hepatoma-derived growth factor-related protein 2 iso...
LRDD                  0.012   leucine rich repeat and death domain containing prot...
LRDD                  0.012   leucine rich repeat and death domain containing prot...
LRDD                  0.012   leucine rich repeat and death domain containing prot...
IL6R                  0.010   interleukin 6 receptor isoform 1 precursor 
APOB                  0.008   apolipoprotein B precursor 
MLL3                  0.008   myeloid/lymphoid or mixed-lineage leukemia 3 
USH2A                 0.006   usherin isoform B 
USH2A                 0.006   usherin isoform A 
FNBP1L                0.006   formin binding protein 1-like isoform 1 
FNBP1L                0.006   formin binding protein 1-like isoform 2 
LOC729454             0.006   PREDICTED: similar to Destrin (actin depolymerizing...
LOC729312             0.006   PREDICTED: hypothetical protein 
LOC729454             0.006   PREDICTED: similar to destrin 
LOC729312             0.006   PREDICTED: hypothetical protein 
LOC729454             0.006   PREDICTED: similar to Destrin (actin depolymerizing...
SEC24B                0.006   SEC24 (S. cerevisiae) homolog B isoform b 
SEC24B                0.006   SEC24 (S. cerevisiae) homolog B isoform a 
KNDC1                 0.006   kinase non-catalytic C-lobe domain (KIND) containin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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