Guide to the Human Genome
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Name: CYP51A1 Sequence: fasta or formatted (509aa) NCBI GI: 4503243
Description:

cytochrome P450, family 51, subfamily A, polypeptide 1 isoform 1

Referenced in:

Cholesterol Biosynthesis
Cytochrome P450 Enzymes

Other entries for this name:
alt prot [404aa] cytochrome P450, family 51, subfamily A, polypeptide 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         39           4
 C cysteine            1.4          7           1
 D aspartate           4.7         24           2
 E glutamate           5.5         28           1
 F phenylalanine       4.9         25           2
 G glycine             7.1         36           2
 H histidine           2.4         12           1
 I isoleucine          5.5         28           2
 K lysine              6.3         32           2
 L leucine            12.4         63           3
 M methionine          2.8         14           2
 N asparagine          3.3         17           1
 P proline             5.5         28           2
 Q glutamine           3.9         20           1
 R arginine            5.1         26           3
 S serine              5.5         28           2
 T threonine           5.7         29           2
 V valine              5.1         26           1
 W tryptophan          1.2          6           1
 Y tyrosine            4.1         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytochrome P450, family 51, subfamily A, polypeptide ... 
CYP51A1               0.798   cytochrome P450, family 51, subfamily A, polypeptid...
CYP4X1                0.098   cytochrome P450, family 4, subfamily X, polypeptide ...
CYP26A1               0.091   cytochrome P450, family 26, subfamily A, polypeptide...
CYP39A1               0.086   cytochrome P450, family 39, subfamily A, polypeptide...
CYP26A1               0.083   cytochrome P450, family 26, subfamily A, polypeptide...
CYP4F22               0.081   cytochrome P450, family 4, subfamily F, polypeptide...
CYP3A4                0.077   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4V2                0.077   cytochrome P450, family 4, subfamily v, polypeptide...
CYP3A7                0.076   cytochrome P450, family 3, subfamily A, polypeptide 7...
CYP4F12               0.076   cytochrome P450, family 4, subfamily F, polypeptide...
CYP46A1               0.074   cytochrome P450, family 46 
CYP4B1                0.074   cytochrome P450, family 4, subfamily B, polypeptide...
CYP4B1                0.074   cytochrome P450, family 4, subfamily B, polypeptide...
CYP26B1               0.073   cytochrome P450, family 26, subfamily b, polypeptide ...
CYP4F8                0.073   cytochrome P450, family 4, subfamily F, polypeptide 8...
CYP4Z1                0.069   cytochrome P450 4Z1 
CYP3A43               0.068   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP4F11               0.068   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F11               0.068   cytochrome P450 family 4 subfamily F polypeptide 11...
CYP4F2                0.068   cytochrome P450, family 4, subfamily F, polypeptide ...
CYP4F3                0.066   cytochrome P450, family 4, subfamily F, polypeptide...
CYP3A5                0.064   cytochrome P450, family 3, subfamily A, polypeptide 5...
CYP1A1                0.064   cytochrome P450, family 1, subfamily A, polypeptide 1...
CYP3A43               0.064   cytochrome P450, family 3, subfamily A, polypeptide ...
CYP7A1                0.060   cytochrome P450, family 7, subfamily A, polypeptide...
CYP24A1               0.059   cytochrome P450 family 24 subfamily A polypeptide 1 ...
CYP1A2                0.059   cytochrome P450, family 1, subfamily A, polypeptide ...
CYP2U1                0.058   cytochrome P450, family 2, subfamily U, polypeptide ...
CYP26C1               0.058   cytochrome P450, family 26, subfamily C, polypeptide...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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