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Search of human proteins with 4503049
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4503049 cysteine-rich protein 2 [Homo sapiens]
(208 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4503049 cysteine-rich protein 2 [Homo sapiens] 460 e-130
gi|116517305 cysteine-rich protein 3 [Homo sapiens] 288 2e-78
gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo s... 132 2e-31
gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens] 129 1e-30
gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens] 129 1e-30
gi|4503047 cysteine-rich protein 1 (intestinal) [Homo sapiens] 129 2e-30
gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens] 118 3e-27
gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo... 86 3e-17
gi|170932518 paxillin isoform 3 [Homo sapiens] 64 7e-11
gi|170932516 paxillin isoform 2 [Homo sapiens] 64 7e-11
gi|170932514 paxillin isoform 1 [Homo sapiens] 64 7e-11
gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens] 63 2e-10
gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens] 63 2e-10
gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens] 63 2e-10
gi|5453710 LIM and SH3 protein 1 [Homo sapiens] 55 3e-08
gi|109638745 transforming growth factor beta 1 induced transcrip... 55 4e-08
gi|21361591 transforming growth factor beta 1 induced transcript... 55 4e-08
gi|7662330 actin binding LIM protein family, member 3 [Homo sapi... 55 6e-08
gi|47087157 nebulette non-muscle isoform [Homo sapiens] 54 9e-08
gi|46049092 nebulin-related anchoring protein isoform C [Homo sa... 54 9e-08
gi|46049105 nebulin-related anchoring protein isoform S [Homo sa... 54 9e-08
gi|54112385 four and a half LIM domains 3 [Homo sapiens] 54 1e-07
gi|165905591 LIM domain and actin binding 1 isoform c [Homo sapi... 52 3e-07
gi|165905589 LIM domain and actin binding 1 isoform a [Homo sapi... 52 3e-07
gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens] 52 3e-07
gi|194272207 actin binding LIM protein family, member 2 isoform ... 51 6e-07
gi|153792514 actin binding LIM protein family, member 2 isoform ... 51 6e-07
gi|194272204 actin binding LIM protein family, member 2 isoform ... 51 6e-07
gi|194272202 actin binding LIM protein family, member 2 isoform ... 51 6e-07
gi|194272200 actin binding LIM protein family, member 2 isoform ... 51 6e-07
>gi|4503049 cysteine-rich protein 2 [Homo sapiens]
Length = 208
Score = 460 bits (1183), Expect = e-130
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 60
MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT
Sbjct: 1 MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 60
Query: 61 LFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFT 120
LFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFT
Sbjct: 61 LFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFT 120
Query: 121 GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG 180
GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG
Sbjct: 121 GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG 180
Query: 181 ILFGPKGVNTGAVGSYIYDRDPEGKVQP 208
ILFGPKGVNTGAVGSYIYDRDPEGKVQP
Sbjct: 181 ILFGPKGVNTGAVGSYIYDRDPEGKVQP 208
>gi|116517305 cysteine-rich protein 3 [Homo sapiens]
Length = 204
Score = 288 bits (737), Expect = 2e-78
Identities = 126/199 (63%), Positives = 150/199 (75%), Gaps = 2/199 (1%)
Query: 1 MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 60
M+ CP+C + V+FAEKVSSLGK+WH+FCLKCERC L+PGGHAEH+G+P+CHKPCY
Sbjct: 1 MSWTCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGA 60
Query: 61 LFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFT 120
LFGP+GVNIGG GSY+Y P P T P+ P++ + R +G P+G + TFT
Sbjct: 61 LFGPRGVNIGGVGSYLYNPP-TPSPGCTTPLS-PSSFSPPRPRTGLPQGKKSPPHMKTFT 118
Query: 121 GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG 180
GE + CP C + VYFAEKV SLG++WHRPCLRC+RC KTLT G HAEHDG PYCH PCYG
Sbjct: 119 GETSLCPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYCHVPCYG 178
Query: 181 ILFGPKGVNTGAVGSYIYD 199
LFGPKGVN G VG YIYD
Sbjct: 179 YLFGPKGVNIGDVGCYIYD 197
>gi|4758086 cysteine and glycine-rich protein 1 isoform 1 [Homo
sapiens]
Length = 193
Score = 132 bits (333), Expect = 2e-31
Identities = 78/189 (41%), Positives = 93/189 (49%), Gaps = 15/189 (7%)
Query: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFG 63
KC C KTVYFAE+V G +HK C C C K L A H + +C K CY +G
Sbjct: 9 KCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYC-KSCYGKKYG 67
Query: 64 PKGVNIG-GAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
PKG G GAG+ +K + G + EE P P+ AS G
Sbjct: 68 PKGYGYGQGAGTLSTDKGESLG-----------IKHEEAPGHRPTTNPN-ASKFAQKIGG 115
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGIL 182
CPRCS+ VY AEKV GK WH+ C RC +CGK L A+ DG+ YC K CY
Sbjct: 116 SERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYC-KGCYAKN 174
Query: 183 FGPKGVNTG 191
FGPKG G
Sbjct: 175 FGPKGFGFG 183
Score = 79.7 bits (195), Expect = 2e-15
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 61
+ +CP+C + VY AEKV GK WHK C +C +C K L A+ DG+ +C K CYA
Sbjct: 116 SERCPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLADKDGEIYC-KGCYAKN 174
Query: 62 FGPKGVNIG-GAGSYIYEK 79
FGPKG G GAG+ ++ +
Sbjct: 175 FGPKGFGFGQGAGALVHSE 193
Score = 58.2 bits (139), Expect = 5e-09
Identities = 30/71 (42%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 121 GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG 180
G C C K VYFAE+V G +H+ C C C K L A H + YC K CYG
Sbjct: 5 GGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYC-KSCYG 63
Query: 181 ILFGPKGVNTG 191
+GPKG G
Sbjct: 64 KKYGPKGYGYG 74
>gi|189083753 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 129 bits (325), Expect = 1e-30
Identities = 73/200 (36%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
+KC C+KTVY AE++ G+ +HK C C C K L A H+ + +C K CY +
Sbjct: 8 AKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYC-KVCYGRRY 66
Query: 63 GPKGVNIG-GAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTG 121
GPKG+ G GAG + G + + A S P K T G
Sbjct: 67 GPKGIGYGQGAGCLSTDT----GEHLGLQFQQSPKPARSVTTSNPSK-------FTAKFG 115
Query: 122 EPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGI 181
E CPRC K VY AEKV GK WH+ C RC CGK+L + DG+ YC K CY
Sbjct: 116 ESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYC-KVCYAK 174
Query: 182 LFGPKGVNTGAVGSYIYDRD 201
FGP G+ G + + ++
Sbjct: 175 NFGPTGIGFGGLTQQVEKKE 194
Score = 78.6 bits (192), Expect = 4e-15
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 61
+ KCP+C K+VY AEKV GK WHK C +C C K+L + DG+ +C K CYA
Sbjct: 117 SEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYC-KVCYAKN 175
Query: 62 FGPKGVNIGGAGSYIYEK 79
FGP G+ GG + +K
Sbjct: 176 FGPTGIGFGGLTQQVEKK 193
>gi|4502893 cysteine and glycine-rich protein 3 [Homo sapiens]
Length = 194
Score = 129 bits (325), Expect = 1e-30
Identities = 73/200 (36%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
+KC C+KTVY AE++ G+ +HK C C C K L A H+ + +C K CY +
Sbjct: 8 AKCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYC-KVCYGRRY 66
Query: 63 GPKGVNIG-GAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTG 121
GPKG+ G GAG + G + + A S P K T G
Sbjct: 67 GPKGIGYGQGAGCLSTDT----GEHLGLQFQQSPKPARSVTTSNPSK-------FTAKFG 115
Query: 122 EPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGI 181
E CPRC K VY AEKV GK WH+ C RC CGK+L + DG+ YC K CY
Sbjct: 116 ESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYC-KVCYAK 174
Query: 182 LFGPKGVNTGAVGSYIYDRD 201
FGP G+ G + + ++
Sbjct: 175 NFGPTGIGFGGLTQQVEKKE 194
Score = 78.6 bits (192), Expect = 4e-15
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 61
+ KCP+C K+VY AEKV GK WHK C +C C K+L + DG+ +C K CYA
Sbjct: 117 SEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYC-KVCYAKN 175
Query: 62 FGPKGVNIGGAGSYIYEK 79
FGP G+ GG + +K
Sbjct: 176 FGPTGIGFGGLTQQVEKK 193
>gi|4503047 cysteine-rich protein 1 (intestinal) [Homo sapiens]
Length = 77
Score = 129 bits (324), Expect = 2e-30
Identities = 50/73 (68%), Positives = 62/73 (84%)
Query: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGP 185
CP+C+K+VYFAE+VTSLGKDWHRPCL+CE+CGKTLT GGHAEH+G+PYC+ PCY +FGP
Sbjct: 4 CPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFGP 63
Query: 186 KGVNTGAVGSYIY 198
KG G S+ +
Sbjct: 64 KGFGRGGAESHTF 76
Score = 129 bits (323), Expect = 2e-30
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFG 63
KCPKC+K VYFAE+V+SLGKDWH+ CLKCE+C KTLT GGHAEH+GKP+C+ PCYA +FG
Sbjct: 3 KCPKCNKEVYFAERVTSLGKDWHRPCLKCEKCGKTLTSGGHAEHEGKPYCNHPCYAAMFG 62
Query: 64 PKGVNIGGAGSYIYE 78
PKG GGA S+ ++
Sbjct: 63 PKGFGRGGAESHTFK 77
>gi|4503101 cysteine and glycine-rich protein 2 [Homo sapiens]
Length = 193
Score = 118 bits (296), Expect = 3e-27
Identities = 68/190 (35%), Positives = 91/190 (47%), Gaps = 15/190 (7%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
+KC C +TVY AE+V G+ +H+ C C C K L A HD + +C K CY +
Sbjct: 8 NKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYC-KSCYGKKY 66
Query: 63 GPKGVNIG-GAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTG 121
GPKG G GAG+ ++ G + E + P P+ + + G
Sbjct: 67 GPKGYGYGQGAGTLNMDRGERLG-----------IKPESVQPHRPTTNPNTSKFAQKYGG 115
Query: 122 EPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGI 181
C RC VY AEK+ GK WH+ C RC +CGK+L E +G+ YC K CY
Sbjct: 116 AEK-CSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYC-KGCYAK 173
Query: 182 LFGPKGVNTG 191
FGPKG G
Sbjct: 174 NFGPKGFGYG 183
Score = 75.5 bits (184), Expect = 3e-14
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 61
A KC +C +VY AEK+ GK WHK C +C +C K+L E +G+ +C K CYA
Sbjct: 116 AEKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYC-KGCYAKN 174
Query: 62 FGPKGVNIG-GAGSYIY 77
FGPKG G GAG+ ++
Sbjct: 175 FGPKGFGYGQGAGALVH 191
Score = 62.0 bits (149), Expect = 3e-10
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 121 GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG 180
G N C C + VY AE+V G+ +HR C C C K L A HD + YC K CYG
Sbjct: 5 GGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYC-KSCYG 63
Query: 181 ILFGPKGVNTG-AVGSYIYDRDPEGKVQP 208
+GPKG G G+ DR ++P
Sbjct: 64 KKYGPKGYGYGQGAGTLNMDRGERLGIKP 92
>gi|221316627 cysteine and glycine-rich protein 1 isoform 2 [Homo
sapiens]
Length = 140
Score = 85.5 bits (210), Expect = 3e-17
Identities = 55/142 (38%), Positives = 66/142 (46%), Gaps = 14/142 (9%)
Query: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFG 63
KC C KTVYFAE+V G +HK C C C K L A H + +C K CY +G
Sbjct: 9 KCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYC-KSCYGKKYG 67
Query: 64 PKGVNIG-GAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
PKG G GAG+ +K + G + EE P P+ AS G
Sbjct: 68 PKGYGYGQGAGTLSTDKGESLG-----------IKHEEAPGHRPTTNPN-ASKFAQKIGG 115
Query: 123 PNTCPRCSKKVYFAEKVTSLGK 144
CPRCS+ VY AEKV GK
Sbjct: 116 SERCPRCSQAVYAAEKVIGAGK 137
Score = 58.2 bits (139), Expect = 5e-09
Identities = 30/71 (42%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 121 GEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYG 180
G C C K VYFAE+V G +H+ C C C K L A H + YC K CYG
Sbjct: 5 GGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYC-KSCYG 63
Query: 181 ILFGPKGVNTG 191
+GPKG G
Sbjct: 64 KKYGPKGYGYG 74
Score = 30.0 bits (66), Expect = 1.5
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGK 23
+ +CP+C + VY AEKV GK
Sbjct: 116 SERCPRCSQAVYAAEKVIGAGK 137
>gi|170932518 paxillin isoform 3 [Homo sapiens]
Length = 424
Score = 64.3 bits (155), Expect = 7e-11
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 14/175 (8%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C K + + V+++GK WH C C + + E DG+P+C K Y LF P
Sbjct: 191 CGACKKPIA-GQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKD-YHNLFSP 248
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGP-----IEVPAARAEERKASGPPKGPSRASSVTTF 119
+ G I +K + + P + A E K R F
Sbjct: 249 RCYYCNGP---ILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 305
Query: 120 TGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+ C R + Y +++L WH C C C G EHDGQPYC
Sbjct: 306 APKCGGCARAILENY----ISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYC 356
Score = 47.8 bits (112), Expect = 7e-06
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 105 GPPKGPSRASSVT-----------TFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
GPPK S+ S+ T C C K + + VT++GK WH C
Sbjct: 159 GPPKPGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKPIA-GQVVTAMGKTWHPEHFVC 217
Query: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
C + + E DGQPYC K Y LF P+
Sbjct: 218 THCQEEIGSRNFFERDGQPYCEKD-YHNLFSPR 249
Score = 42.7 bits (99), Expect = 2e-04
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFC 53
A KC C + + +S+L WH C C C G EHDG+P+C
Sbjct: 306 APKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYC 356
Score = 41.6 bits (96), Expect = 5e-04
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 139 VTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
VT+L + WH C +CG P G E DG+ YC K Y +F PK
Sbjct: 262 VTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKD-YFDMFAPK 308
Score = 33.9 bits (76), Expect = 0.10
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
S C C K + ++++ K +H C C K L G E + KP+C C+ LF
Sbjct: 366 SLCSGCQKPIT-GRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQN-CFLKLF 423
>gi|170932516 paxillin isoform 2 [Homo sapiens]
Length = 557
Score = 64.3 bits (155), Expect = 7e-11
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 14/175 (8%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C K + + V+++GK WH C C + + E DG+P+C K Y LF P
Sbjct: 324 CGACKKPIA-GQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKD-YHNLFSP 381
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGP-----IEVPAARAEERKASGPPKGPSRASSVTTF 119
+ G I +K + + P + A E K R F
Sbjct: 382 RCYYCNGP---ILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 438
Query: 120 TGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+ C R + Y +++L WH C C C G EHDGQPYC
Sbjct: 439 APKCGGCARAILENY----ISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYC 489
Score = 47.8 bits (112), Expect = 7e-06
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 105 GPPKGPSRASSVT-----------TFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
GPPK S+ S+ T C C K + + VT++GK WH C
Sbjct: 292 GPPKPGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKPIA-GQVVTAMGKTWHPEHFVC 350
Query: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
C + + E DGQPYC K Y LF P+
Sbjct: 351 THCQEEIGSRNFFERDGQPYCEKD-YHNLFSPR 382
Score = 42.7 bits (99), Expect = 2e-04
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFC 53
A KC C + + +S+L WH C C C G EHDG+P+C
Sbjct: 439 APKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYC 489
Score = 41.6 bits (96), Expect = 5e-04
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 139 VTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
VT+L + WH C +CG P G E DG+ YC K Y +F PK
Sbjct: 395 VTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKD-YFDMFAPK 441
Score = 33.9 bits (76), Expect = 0.10
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
S C C K + ++++ K +H C C K L G E + KP+C C+ LF
Sbjct: 499 SLCSGCQKPIT-GRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQN-CFLKLF 556
>gi|170932514 paxillin isoform 1 [Homo sapiens]
Length = 591
Score = 64.3 bits (155), Expect = 7e-11
Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 14/175 (8%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C K + + V+++GK WH C C + + E DG+P+C K Y LF P
Sbjct: 358 CGACKKPIA-GQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKD-YHNLFSP 415
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGP-----IEVPAARAEERKASGPPKGPSRASSVTTF 119
+ G I +K + + P + A E K R F
Sbjct: 416 RCYYCNGP---ILDKVVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDMF 472
Query: 120 TGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+ C R + Y +++L WH C C C G EHDGQPYC
Sbjct: 473 APKCGGCARAILENY----ISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYC 523
Score = 48.1 bits (113), Expect = 5e-06
Identities = 33/114 (28%), Positives = 42/114 (36%), Gaps = 13/114 (11%)
Query: 84 GPQVTGPIEVPAARAEERKASGPPKGPSRASSVT-----------TFTGEPNTCPRCSKK 132
G Q G GPPK S+ S+ T C C K
Sbjct: 305 GGQDEGGFMAQGKTGSSSPPGGPPKPGSQLDSMLGSLQSDLNKLGVATVAKGVCGACKKP 364
Query: 133 VYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
+ + VT++GK WH C C + + E DGQPYC K Y LF P+
Sbjct: 365 IA-GQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKD-YHNLFSPR 416
Score = 42.7 bits (99), Expect = 2e-04
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFC 53
A KC C + + +S+L WH C C C G EHDG+P+C
Sbjct: 473 APKCGGCARAI-LENYISALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYC 523
Score = 41.6 bits (96), Expect = 5e-04
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 139 VTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
VT+L + WH C +CG P G E DG+ YC K Y +F PK
Sbjct: 429 VTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKD-YFDMFAPK 475
Score = 33.9 bits (76), Expect = 0.10
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
S C C K + ++++ K +H C C K L G E + KP+C C+ LF
Sbjct: 533 SLCSGCQKPIT-GRCITAMAKKFHPEHFVCAFCLKQLNKGTFKEQNDKPYCQN-CFLKLF 590
>gi|51173715 actin-binding LIM protein 1 isoform c [Homo sapiens]
Length = 746
Score = 63.2 bits (152), Expect = 2e-10
Identities = 46/184 (25%), Positives = 70/184 (38%), Gaps = 55/184 (29%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C C + V E V++LGK +H C C C + PG +G+ + C
Sbjct: 96 TRCHGCGEFVE-GEVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQLC----- 149
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
+P++ P+ T TF+
Sbjct: 150 ---------------AQPMSSSPKET-----------------------------TFS-- 163
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGIL 182
+ C C + + + + +L K WH C +C+ CGK LT G + DG PYC K G L
Sbjct: 164 -SNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKDYQG-L 220
Query: 183 FGPK 186
FG K
Sbjct: 221 FGVK 224
Score = 52.4 bits (124), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 61
+S C C + + + + +L K WH C KC+ C K LT G + DG P+C K Y L
Sbjct: 163 SSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKD-YQGL 220
Query: 62 FGPK 65
FG K
Sbjct: 221 FGVK 224
Score = 32.7 bits (73), Expect = 0.22
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 4 KCPKCDKTVYFAEKVSSLG-KDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPC 57
KC C + + KV G K +H C +C RC++ T G G H C
Sbjct: 224 KCEACHQ--FITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDC 276
>gi|51173713 actin-binding LIM protein 1 isoform b [Homo sapiens]
Length = 718
Score = 63.2 bits (152), Expect = 2e-10
Identities = 46/184 (25%), Positives = 70/184 (38%), Gaps = 55/184 (29%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C C + V E V++LGK +H C C C + PG +G+ + C
Sbjct: 96 TRCHGCGEFVE-GEVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQLC----- 149
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
+P++ P+ T TF+
Sbjct: 150 ---------------AQPMSSSPKET-----------------------------TFS-- 163
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGIL 182
+ C C + + + + +L K WH C +C+ CGK LT G + DG PYC K G L
Sbjct: 164 -SNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKDYQG-L 220
Query: 183 FGPK 186
FG K
Sbjct: 221 FGVK 224
Score = 52.4 bits (124), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 61
+S C C + + + + +L K WH C KC+ C K LT G + DG P+C K Y L
Sbjct: 163 SSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKD-YQGL 220
Query: 62 FGPK 65
FG K
Sbjct: 221 FGVK 224
Score = 32.7 bits (73), Expect = 0.22
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 4 KCPKCDKTVYFAEKVSSLG-KDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPC 57
KC C + + KV G K +H C +C RC++ T G G H C
Sbjct: 224 KCEACHQ--FITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDC 276
>gi|51173711 actin-binding LIM protein 1 isoform a [Homo sapiens]
Length = 778
Score = 63.2 bits (152), Expect = 2e-10
Identities = 46/184 (25%), Positives = 70/184 (38%), Gaps = 55/184 (29%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C C + V E V++LGK +H C C C + PG +G+ + C
Sbjct: 156 TRCHGCGEFVE-GEVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQLC----- 209
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
+P++ P+ T TF+
Sbjct: 210 ---------------AQPMSSSPKET-----------------------------TFS-- 223
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGIL 182
+ C C + + + + +L K WH C +C+ CGK LT G + DG PYC K G L
Sbjct: 224 -SNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKDYQG-L 280
Query: 183 FGPK 186
FG K
Sbjct: 281 FGVK 284
Score = 52.4 bits (124), Expect = 3e-07
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATL 61
+S C C + + + + +L K WH C KC+ C K LT G + DG P+C K Y L
Sbjct: 223 SSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLT-GEYISKDGAPYCEKD-YQGL 280
Query: 62 FGPK 65
FG K
Sbjct: 281 FGVK 284
Score = 32.7 bits (73), Expect = 0.22
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Query: 4 KCPKCDKTVYFAEKVSSLG-KDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPC 57
KC C + + KV G K +H C +C RC++ T G G H C
Sbjct: 284 KCEACHQ--FITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDC 336
>gi|5453710 LIM and SH3 protein 1 [Homo sapiens]
Length = 261
Score = 55.5 bits (132), Expect = 3e-08
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 1 MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCH 54
M C +C K VY EKV+ L K WHK C CE C TL + ++ KP+C+
Sbjct: 1 MNPNCARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCN 54
Score = 54.3 bits (129), Expect = 7e-08
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCH 175
PN C RC K VY EKV L K WH+ C CE C TL + ++ +PYC+
Sbjct: 3 PN-CARCGKIVYPTEKVNCLDKFWHKACFHCETCKMTLNMKNYKGYEKKPYCN 54
>gi|109638745 transforming growth factor beta 1 induced transcript 1
isoform 1 [Homo sapiens]
Length = 461
Score = 55.1 bits (131), Expect = 4e-08
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 21/189 (11%)
Query: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFG 63
+C C++ + + V++LG WH C C + G E +G+P+C + + LF
Sbjct: 286 RCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRD-FLQLFA 343
Query: 64 PKGVNIGGA--GSYIYEKPLAEGPQ--VTGPIEVPAARAEERKASGPPKGPS----RASS 115
P+ G +YI P V P + + G P + R S
Sbjct: 344 PRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGS 403
Query: 116 VTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCH 175
+ G P T RC V++LG+ +H C C + LT G E G+PYC
Sbjct: 404 LCATCGLPVT-GRC---------VSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYC- 452
Query: 176 KPCYGILFG 184
+PC+ LFG
Sbjct: 453 QPCFLKLFG 461
Score = 52.4 bits (124), Expect = 3e-07
Identities = 44/177 (24%), Positives = 65/177 (36%), Gaps = 18/177 (10%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C+K + + V++LG+ WH C CS L E DG PFC + CY F P
Sbjct: 228 CGSCNKPIA-GQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPE-CYFERFSP 285
Query: 65 KGVNIGGAGSYIYEKPLAE-----GPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTF 119
+ G I K + P+ + +E + R + F
Sbjct: 286 R---CGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLF 342
Query: 120 TGEPNTCPRCS--KKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
PRC + +++L WH C C C + G EH+G+P C
Sbjct: 343 ------APRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLC 393
Score = 44.7 bits (104), Expect = 6e-05
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 88 TGPIEVPAARAEERKASGPPKGPSRASSVTTFTG--------------EPNTCPRCSKKV 133
+GP + P + + PP+ P+ S+ T G C C+K +
Sbjct: 177 SGPTQPPVVSSTNEGSPSPPE-PTGKGSLDTMLGLLQSDLSRRGVPTQAKGLCGSCNKPI 235
Query: 134 YFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
+ VT+LG+ WH C C L E DG P+C + CY F P+
Sbjct: 236 A-GQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPE-CYFERFSPR 286
Score = 43.5 bits (101), Expect = 1e-04
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
S C C V VS+LG+ +H C C + LT G E GKP+C +PC+ LF
Sbjct: 403 SLCATCGLPVT-GRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYC-QPCFLKLF 460
Query: 63 G 63
G
Sbjct: 461 G 461
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGP 185
C C++ + + VT+LG WH C CG+ G E +G+PYC + + LF P
Sbjct: 287 CGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRD-FLQLFAP 344
Query: 186 K 186
+
Sbjct: 345 R 345
Score = 39.3 bits (90), Expect = 0.002
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYA 59
A +C C + +S+L WH C C C + G EH+G+P C +A
Sbjct: 343 APRCQGCQGPI-LDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHA 399
>gi|21361591 transforming growth factor beta 1 induced transcript 1
isoform 2 [Homo sapiens]
Length = 444
Score = 55.1 bits (131), Expect = 4e-08
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 21/189 (11%)
Query: 4 KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFG 63
+C C++ + + V++LG WH C C + G E +G+P+C + + LF
Sbjct: 269 RCGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRD-FLQLFA 326
Query: 64 PKGVNIGGA--GSYIYEKPLAEGPQ--VTGPIEVPAARAEERKASGPPKGPS----RASS 115
P+ G +YI P V P + + G P + R S
Sbjct: 327 PRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGS 386
Query: 116 VTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCH 175
+ G P T RC V++LG+ +H C C + LT G E G+PYC
Sbjct: 387 LCATCGLPVT-GRC---------VSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYC- 435
Query: 176 KPCYGILFG 184
+PC+ LFG
Sbjct: 436 QPCFLKLFG 444
Score = 52.4 bits (124), Expect = 3e-07
Identities = 44/177 (24%), Positives = 65/177 (36%), Gaps = 18/177 (10%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C+K + + V++LG+ WH C CS L E DG PFC + CY F P
Sbjct: 211 CGSCNKPIA-GQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPE-CYFERFSP 268
Query: 65 KGVNIGGAGSYIYEKPLAE-----GPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTF 119
+ G I K + P+ + +E + R + F
Sbjct: 269 R---CGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLF 325
Query: 120 TGEPNTCPRCS--KKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
PRC + +++L WH C C C + G EH+G+P C
Sbjct: 326 ------APRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLC 376
Score = 44.7 bits (104), Expect = 6e-05
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 17/113 (15%)
Query: 88 TGPIEVPAARAEERKASGPPKGPSRASSVTTFTG--------------EPNTCPRCSKKV 133
+GP + P + + PP+ P+ S+ T G C C+K +
Sbjct: 160 SGPTQPPVVSSTNEGSPSPPE-PTGKGSLDTMLGLLQSDLSRRGVPTQAKGLCGSCNKPI 218
Query: 134 YFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
+ VT+LG+ WH C C L E DG P+C + CY F P+
Sbjct: 219 A-GQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPE-CYFERFSPR 269
Score = 43.5 bits (101), Expect = 1e-04
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
S C C V VS+LG+ +H C C + LT G E GKP+C +PC+ LF
Sbjct: 386 SLCATCGLPVT-GRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYC-QPCFLKLF 443
Query: 63 G 63
G
Sbjct: 444 G 444
Score = 39.3 bits (90), Expect = 0.002
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGP 185
C C++ + + VT+LG WH C CG+ G E +G+PYC + + LF P
Sbjct: 270 CGFCNQPIRH-KMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRD-FLQLFAP 327
Query: 186 K 186
+
Sbjct: 328 R 328
Score = 39.3 bits (90), Expect = 0.002
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 2 ASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYA 59
A +C C + +S+L WH C C C + G EH+G+P C +A
Sbjct: 326 APRCQGCQGPI-LDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHA 382
>gi|7662330 actin binding LIM protein family, member 3 [Homo
sapiens]
Length = 683
Score = 54.7 bits (130), Expect = 6e-08
Identities = 41/184 (22%), Positives = 62/184 (33%), Gaps = 54/184 (29%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C C + E +S+LG+ +H C C C K G GK + C ++
Sbjct: 80 TRCDSC-RDFITGEVISALGRTYHPKCFVCSLCRKPFPIGDKVTFSGKECVCQTCSQSMA 138
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
K + I +GPS
Sbjct: 139 SSKPIKI--------------------------------------RGPSH---------- 150
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGIL 182
C C +++ + + +L K WH C +C+ C LT G + DG PYC Y
Sbjct: 151 ---CAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILT-GEYISKDGVPYCESD-YHAQ 205
Query: 183 FGPK 186
FG K
Sbjct: 206 FGIK 209
Score = 47.4 bits (111), Expect = 9e-06
Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
S C C + + + + +L K WH C KC+ CS LT G + DG P+C +A
Sbjct: 149 SHCAGCKEEIKHGQSLLALDKQWHVSCFKCQTCSVILT-GEYISKDGVPYCESDYHAQF- 206
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASG 105
G+ YI + L G + P R + G
Sbjct: 207 ---GIKCETCDRYISGRVLEAGGKHYHPTCARCVRCHQMFTEG 246
>gi|47087157 nebulette non-muscle isoform [Homo sapiens]
Length = 270
Score = 53.9 bits (128), Expect = 9e-08
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 1 MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCH 54
M +C +C K VY EKV+ L K WHK C CE C L + ++ KP+C+
Sbjct: 1 MNPQCARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCN 54
Score = 52.0 bits (123), Expect = 4e-07
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCH 175
C RC K VY EKV L K WH+ C CE C L + ++ +PYC+
Sbjct: 5 CARCGKVVYPTEKVNCLDKYWHKGCFHCEVCKMALNMNNYKGYEKKPYCN 54
>gi|46049092 nebulin-related anchoring protein isoform C [Homo
sapiens]
Length = 1695
Score = 53.9 bits (128), Expect = 9e-08
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCH 54
C +C VY AEK+S + + WHK C CE C L+ H KP+CH
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCH 55
Score = 53.1 bits (126), Expect = 2e-07
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCH 175
C RC VY AEK++ + + WH+ C CE C L+ H +PYCH
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCH 55
>gi|46049105 nebulin-related anchoring protein isoform S [Homo
sapiens]
Length = 1730
Score = 53.9 bits (128), Expect = 9e-08
Identities = 21/50 (42%), Positives = 27/50 (54%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCH 54
C +C VY AEK+S + + WHK C CE C L+ H KP+CH
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCH 55
Score = 53.1 bits (126), Expect = 2e-07
Identities = 20/50 (40%), Positives = 27/50 (54%)
Query: 126 CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCH 175
C RC VY AEK++ + + WH+ C CE C L+ H +PYCH
Sbjct: 6 CSRCGYGVYPAEKISCIDQIWHKACFHCEVCKMMLSVNNFVSHQKKPYCH 55
>gi|54112385 four and a half LIM domains 3 [Homo sapiens]
Length = 280
Score = 53.5 bits (127), Expect = 1e-07
Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 13/191 (6%)
Query: 2 ASKCPKCDKTV-YFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 60
A+ C +C + + + + ++ + +H+ C +C RC ++L D + C+ CY +
Sbjct: 37 ANTCAECQQLIGHDSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCND-CYCS 95
Query: 61 LFGPKGVNIGGAGSYIY--EKPLAEGPQVTGPIEVPAARAEERKASG---PPKGPSRASS 115
F + G + + L G Q + E+ S P KG
Sbjct: 96 AFSSQ---CSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVP 152
Query: 116 VTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCH 175
P C RCSK + VT + WHR CL C C L D PYC
Sbjct: 153 CYENKFAPR-CARCSKTLTQGG-VTYRDQPWHRECLVCTGCQTPLAGQQFTSRDEDPYC- 209
Query: 176 KPCYGILFGPK 186
C+G LF PK
Sbjct: 210 VACFGELFAPK 220
Score = 50.8 bits (120), Expect = 8e-07
Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 8/178 (4%)
Query: 2 ASKCPKCDKTVY-FAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT 60
+S+C C +TV + K+ G+ WH+ C C C + L G +C PCY
Sbjct: 98 SSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYC-VPCYEN 156
Query: 61 LFGPK----GVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSV 116
F P+ + G ++P V + P A + P + +
Sbjct: 157 KFAPRCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFTSRDEDPYCVACFGEL 216
Query: 117 TTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
F + ++C R + + V+ + WH C C RC +L G Q C
Sbjct: 217 --FAPKCSSCKRPIVGLGGGKYVSFEDRHWHHNCFSCARCSTSLVGQGFVPDGDQVLC 272
>gi|165905591 LIM domain and actin binding 1 isoform c [Homo
sapiens]
Length = 600
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 94 PAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
P +RA S PPK + + TC C K VY E++ + + +H C RC
Sbjct: 204 PDSRASSLSESSPPKAMKKFQAPAR-----ETCVECQKTVYPMERLLANQQVFHISCFRC 258
Query: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
C L+ G +A G+ YC KP + LF KG
Sbjct: 259 SYCNNKLSLGTYASLHGRIYC-KPHFNQLFKSKG 291
Score = 47.8 bits (112), Expect = 7e-06
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C +C KTVY E++ + + +H C +C C+ L+ G +A G+ +C KP + LF
Sbjct: 231 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFKS 289
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPP 107
KG G G ++ A + +E PA A R+ P
Sbjct: 290 KGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSP 332
>gi|165905589 LIM domain and actin binding 1 isoform a [Homo
sapiens]
Length = 760
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 94 PAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
P +RA S PPK + + TC C K VY E++ + + +H C RC
Sbjct: 364 PDSRASSLSESSPPKAMKKFQAPAR-----ETCVECQKTVYPMERLLANQQVFHISCFRC 418
Query: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
C L+ G +A G+ YC KP + LF KG
Sbjct: 419 SYCNNKLSLGTYASLHGRIYC-KPHFNQLFKSKG 451
Score = 47.8 bits (112), Expect = 7e-06
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C +C KTVY E++ + + +H C +C C+ L+ G +A G+ +C KP + LF
Sbjct: 391 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFKS 449
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPP 107
KG G G ++ A + +E PA A R+ P
Sbjct: 450 KGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSP 492
>gi|7705373 LIM domain and actin binding 1 isoform b [Homo sapiens]
Length = 759
Score = 52.4 bits (124), Expect = 3e-07
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 94 PAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRC 153
P +RA S PPK + + TC C K VY E++ + + +H C RC
Sbjct: 363 PDSRASSLSESSPPKAMKKFQAPAR-----ETCVECQKTVYPMERLLANQQVFHISCFRC 417
Query: 154 ERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKG 187
C L+ G +A G+ YC KP + LF KG
Sbjct: 418 SYCNNKLSLGTYASLHGRIYC-KPHFNQLFKSKG 450
Score = 47.8 bits (112), Expect = 7e-06
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C +C KTVY E++ + + +H C +C C+ L+ G +A G+ +C KP + LF
Sbjct: 390 CVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYC-KPHFNQLFKS 448
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPP 107
KG G G ++ A + +E PA A R+ P
Sbjct: 449 KGNYDEGFGHRPHKDLWASKNENEEILERPAQLANARETPHSP 491
>gi|194272207 actin binding LIM protein family, member 2 isoform 7
[Homo sapiens]
Length = 470
Score = 51.2 bits (121), Expect = 6e-07
Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 52/172 (30%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C CD+ + E VS+LGK +H C C C PG +GK + C
Sbjct: 81 TRCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLP-- 137
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
V++G + L++G +
Sbjct: 138 ----VSVGSSAH------LSQGLR------------------------------------ 151
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+C C ++ + + +L K WH C +C+ CGK L + DG PYC
Sbjct: 152 --SCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYC 200
Score = 40.8 bits (94), Expect = 8e-04
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C + + + +L K WH C KC+ C K L + DG P+C +A
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYCEADYHAKF--- 208
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASG 105
G+ YI + L G + P R + A G
Sbjct: 209 -GIRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEG 248
Score = 29.3 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 137 EKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPC 178
E V++LGK +H C C C PG +G+ + C
Sbjct: 93 EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
Score = 28.1 bits (61), Expect = 5.5
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 104 SGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPG 163
S P PS + NTC K E + K +H C C+ CG L G
Sbjct: 5 SQPQAAPSPLEKSPSTAILCNTCGNVCK----GEVLRVQDKYFHIKCFVCKACGCDLAEG 60
Query: 164 GHAEHDGQPYC 174
G G+ C
Sbjct: 61 GFFVRQGEYIC 71
>gi|153792514 actin binding LIM protein family, member 2 isoform 6
[Homo sapiens]
Length = 521
Score = 51.2 bits (121), Expect = 6e-07
Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 52/172 (30%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C CD+ + E VS+LGK +H C C C PG +GK + C
Sbjct: 81 TRCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLP-- 137
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
V++G + L++G +
Sbjct: 138 ----VSVGSSAH------LSQGLR------------------------------------ 151
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+C C ++ + + +L K WH C +C+ CGK L + DG PYC
Sbjct: 152 --SCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYC 200
Score = 40.8 bits (94), Expect = 8e-04
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C + + + +L K WH C KC+ C K L + DG P+C +A
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYCEADYHAKF--- 208
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASG 105
G+ YI + L G + P R + A G
Sbjct: 209 -GIRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEG 248
Score = 29.3 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 137 EKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPC 178
E V++LGK +H C C C PG +G+ + C
Sbjct: 93 EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
Score = 28.1 bits (61), Expect = 5.5
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 104 SGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPG 163
S P PS + NTC K E + K +H C C+ CG L G
Sbjct: 5 SQPQAAPSPLEKSPSTAILCNTCGNVCK----GEVLRVQDKYFHIKCFVCKACGCDLAEG 60
Query: 164 GHAEHDGQPYC 174
G G+ C
Sbjct: 61 GFFVRQGEYIC 71
>gi|194272204 actin binding LIM protein family, member 2 isoform 5
[Homo sapiens]
Length = 531
Score = 51.2 bits (121), Expect = 6e-07
Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 52/172 (30%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C CD+ + E VS+LGK +H C C C PG +GK + C
Sbjct: 81 TRCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLP-- 137
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
V++G + L++G +
Sbjct: 138 ----VSVGSSAH------LSQGLR------------------------------------ 151
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+C C ++ + + +L K WH C +C+ CGK L + DG PYC
Sbjct: 152 --SCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYC 200
Score = 40.8 bits (94), Expect = 8e-04
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C + + + +L K WH C KC+ C K L + DG P+C +A
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYCEADYHAKF--- 208
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASG 105
G+ YI + L G + P R + A G
Sbjct: 209 -GIRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEG 248
Score = 29.3 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 137 EKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPC 178
E V++LGK +H C C C PG +G+ + C
Sbjct: 93 EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
Score = 28.1 bits (61), Expect = 5.5
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 104 SGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPG 163
S P PS + NTC K E + K +H C C+ CG L G
Sbjct: 5 SQPQAAPSPLEKSPSTAILCNTCGNVCK----GEVLRVQDKYFHIKCFVCKACGCDLAEG 60
Query: 164 GHAEHDGQPYC 174
G G+ C
Sbjct: 61 GFFVRQGEYIC 71
>gi|194272202 actin binding LIM protein family, member 2 isoform 4
[Homo sapiens]
Length = 559
Score = 51.2 bits (121), Expect = 6e-07
Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 52/172 (30%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C CD+ + E VS+LGK +H C C C PG +GK + C
Sbjct: 81 TRCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLP-- 137
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
V++G + L++G +
Sbjct: 138 ----VSVGSSAH------LSQGLR------------------------------------ 151
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+C C ++ + + +L K WH C +C+ CGK L + DG PYC
Sbjct: 152 --SCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYC 200
Score = 40.8 bits (94), Expect = 8e-04
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C + + + +L K WH C KC+ C K L + DG P+C +A
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYCEADYHAKF--- 208
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASG 105
G+ YI + L G + P R + A G
Sbjct: 209 -GIRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEG 248
Score = 29.3 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 137 EKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPC 178
E V++LGK +H C C C PG +G+ + C
Sbjct: 93 EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
Score = 28.1 bits (61), Expect = 5.5
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 104 SGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPG 163
S P PS + NTC K E + K +H C C+ CG L G
Sbjct: 5 SQPQAAPSPLEKSPSTAILCNTCGNVCK----GEVLRVQDKYFHIKCFVCKACGCDLAEG 60
Query: 164 GHAEHDGQPYC 174
G G+ C
Sbjct: 61 GFFVRQGEYIC 71
>gi|194272200 actin binding LIM protein family, member 2 isoform 3
[Homo sapiens]
Length = 572
Score = 51.2 bits (121), Expect = 6e-07
Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 52/172 (30%)
Query: 3 SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLF 62
++C CD+ + E VS+LGK +H C C C PG +GK + C
Sbjct: 81 TRCFSCDQFIE-GEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKCSLP-- 137
Query: 63 GPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGE 122
V++G + L++G +
Sbjct: 138 ----VSVGSSAH------LSQGLR------------------------------------ 151
Query: 123 PNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
+C C ++ + + +L K WH C +C+ CGK L + DG PYC
Sbjct: 152 --SCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYC 200
Score = 40.8 bits (94), Expect = 8e-04
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 5/101 (4%)
Query: 5 CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGP 64
C C + + + +L K WH C KC+ C K L + DG P+C +A
Sbjct: 153 CGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLN-AEYISKDGLPYCEADYHAKF--- 208
Query: 65 KGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASG 105
G+ YI + L G + P R + A G
Sbjct: 209 -GIRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEG 248
Score = 29.3 bits (64), Expect = 2.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 137 EKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPC 178
E V++LGK +H C C C PG +G+ + C
Sbjct: 93 EVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFNGKECMCQKC 134
Score = 28.1 bits (61), Expect = 5.5
Identities = 20/71 (28%), Positives = 25/71 (35%), Gaps = 4/71 (5%)
Query: 104 SGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPG 163
S P PS + NTC K E + K +H C C+ CG L G
Sbjct: 5 SQPQAAPSPLEKSPSTAILCNTCGNVCK----GEVLRVQDKYFHIKCFVCKACGCDLAEG 60
Query: 164 GHAEHDGQPYC 174
G G+ C
Sbjct: 61 GFFVRQGEYIC 71
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.138 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,771,887
Number of Sequences: 37866
Number of extensions: 616384
Number of successful extensions: 3008
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 2355
Number of HSP's gapped (non-prelim): 683
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.