Guide to the Human Genome
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Name: CPN1 Sequence: fasta or formatted (458aa) NCBI GI: 4503011
Description:

carboxypeptidase N, polypeptide 1 precursor

Referenced in:

Carboxypeptidases
Leucine-rich Repeat Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         24           3
 C cysteine            1.1          5           1
 D aspartate           4.6         21           2
 E glutamate           6.3         29           3
 F phenylalanine       4.1         19           1
 G glycine             7.4         34           2
 H histidine           4.4         20           2
 I isoleucine          3.7         17           1
 K lysine              3.7         17           2
 L leucine             9.8         45           4
 M methionine          2.2         10           1
 N asparagine          6.6         30           2
 P proline             6.6         30           2
 Q glutamine           4.1         19           1
 R arginine            6.8         31           2
 S serine              5.2         24           1
 T threonine           4.1         19           1
 V valine              7.9         36           2
 W tryptophan          1.3          6           1
 Y tyrosine            4.8         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carboxypeptidase N, polypeptide 1 precursor 
CPE                   0.422   carboxypeptidase E preproprotein 
CPZ                   0.389   carboxypeptidase Z isoform 3 
CPZ                   0.389   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.389   carboxypeptidase Z isoform 1 
CPD                   0.384   carboxypeptidase D precursor 
CPXM1                 0.382   carboxypeptidase X, member 1 precursor 
CPXM2                 0.367   carboxypeptidase X (M14 family), member 2 
AEBP1                 0.349   adipocyte enhancer binding protein 1 precursor [Homo...
CPM                   0.303   carboxypeptidase M precursor 
CPM                   0.303   carboxypeptidase M precursor 
CPM                   0.303   carboxypeptidase M precursor 
CPA4                  0.034   carboxypeptidase A4 preproprotein 
CPA2                  0.025   carboxypeptidase A2 (pancreatic) precursor 
CPA6                  0.023   carboxypeptidase A6 isoform 1 precursor 
CPA3                  0.020   carboxypeptidase A3 precursor 
CPA6                  0.013   carboxypeptidase A6 isoform 2 
CPB2                  0.013   plasma carboxypeptidase B2 isoform a preproprotein ...
CPB1                  0.008   pancreatic carboxypeptidase B1 preproprotein 
CPA1                  0.006   carboxypeptidase A1 precursor 
ATF2                  0.005   activating transcription factor 2 
ACOX2                 0.005   acyl-Coenzyme A oxidase 2 
PRDX5                 0.004   peroxiredoxin 5 isoform b precursor 
FAT1                  0.004   FAT tumor suppressor 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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