Guide to the Human Genome
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Name: ACOX2 Sequence: fasta or formatted (681aa) NCBI GI: 4501869
Description:

acyl-Coenzyme A oxidase 2

Referenced in:

Peroxisomes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.1         62           2
 C cysteine            2.1         14           1
 D aspartate           4.8         33           1
 E glutamate           5.0         34           2
 F phenylalanine       3.8         26           2
 G glycine             5.6         38           2
 H histidine           3.4         23           1
 I isoleucine          4.8         33           3
 K lysine              3.4         23           1
 L leucine            11.7         80           2
 M methionine          2.3         16           2
 N asparagine          2.8         19           1
 P proline             4.3         29           1
 Q glutamine           6.6         45           3
 R arginine            6.5         44           2
 S serine              6.8         46           1
 T threonine           6.2         42           2
 V valine              5.4         37           3
 W tryptophan          1.3          9           2
 Y tyrosine            4.1         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A oxidase 2 
ACOX1                 0.391   acyl-Coenzyme A oxidase 1 isoform b 
ACOX1                 0.385   acyl-Coenzyme A oxidase 1 isoform a 
ACOX3                 0.173   acyl-Coenzyme A oxidase 3 isoform a 
ACOX3                 0.153   acyl-Coenzyme A oxidase 3 isoform b 
ACOXL                 0.102   acyl-Coenzyme A oxidase-like 2 
ACOXL                 0.091   acyl-Coenzyme A oxidase-like 1 
ACOXL                 0.090   acyl-Coenzyme A oxidase-like 3 
ACADS                 0.010   short-chain acyl-CoA dehydrogenase precursor 
GCDH                  0.010   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.010   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACAD9                 0.010   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACADVL                0.009   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.009   acyl-Coenzyme A dehydrogenase, very long chain isofo...
ACADL                 0.007   long-chain acyl-CoA dehydrogenase precursor 
ACADM                 0.007   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.007   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACADSB                0.007   acyl-Coenzyme A dehydrogenase, short/branched chain p...
TNFRSF9               0.005   tumor necrosis factor receptor superfamily, member 9 ...
FBXO18                0.005   F-box only protein, helicase, 18 isoform 1 
FBXO18                0.005   F-box only protein, helicase, 18 isoform 2 
ACAD8                 0.004   acyl-Coenzyme A dehydrogenase family, member 8 
CPN1                  0.004   carboxypeptidase N, polypeptide 1 precursor 
DNAH7                 0.004   dynein, axonemal, heavy chain 7 
ATP6V1D               0.004   H(+)-transporting two-sector ATPase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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