Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CPA1 Sequence: fasta or formatted (419aa) NCBI GI: 4502997
Description:

carboxypeptidase A1 precursor

Referenced in:

Carboxypeptidases
Pancreas and Insulin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         30           2
 C cysteine            0.5          2           1
 D aspartate           6.0         25           1
 E glutamate           6.0         25           2
 F phenylalanine       5.5         23           1
 G glycine             6.9         29           2
 H histidine           3.3         14           1
 I isoleucine          7.2         30           2
 K lysine              4.8         20           2
 L leucine             8.8         37           2
 M methionine          1.4          6           1
 N asparagine          2.9         12           1
 P proline             4.1         17           1
 Q glutamine           4.3         18           1
 R arginine            3.8         16           1
 S serine              8.1         34           2
 T threonine           6.9         29           1
 V valine              6.0         25           1
 W tryptophan          1.9          8           1
 Y tyrosine            4.5         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   carboxypeptidase A1 precursor 
CPA2                  0.626   carboxypeptidase A2 (pancreatic) precursor 
CPA5                  0.616   carboxypeptidase A5 isoform 1 
CPA5                  0.616   carboxypeptidase A5 isoform 1 
CPA4                  0.562   carboxypeptidase A4 preproprotein 
CPA5                  0.466   carboxypeptidase A5 isoform 2 
CPB1                  0.385   pancreatic carboxypeptidase B1 preproprotein 
CPA6                  0.326   carboxypeptidase A6 isoform 1 precursor 
CPA3                  0.324   carboxypeptidase A3 precursor 
CPB2                  0.281   plasma carboxypeptidase B2 isoform a preproprotein ...
CPO                   0.253   carboxypeptidase O 
CPB2                  0.186   plasma carboxypeptidase B2 isoform b 
CPA6                  0.094   carboxypeptidase A6 isoform 2 
CPD                   0.035   carboxypeptidase D precursor 
CPZ                   0.023   carboxypeptidase Z isoform 3 
CPZ                   0.023   carboxypeptidase Z isoform 2 precursor 
CPZ                   0.023   carboxypeptidase Z isoform 1 
CUX1                  0.018   cut-like homeobox 1 isoform c 
CUX1                  0.018   cut-like homeobox 1 isoform b 
MYH13                 0.010   myosin, heavy polypeptide 13, skeletal muscle [Homo...
EXT1                  0.008   exostosin 1 
ACVRL1                0.007   activin A receptor type II-like 1 
ACVRL1                0.007   activin A receptor type II-like 1 
AEBP1                 0.007   adipocyte enhancer binding protein 1 precursor [Homo...
CPN1                  0.007   carboxypeptidase N, polypeptide 1 precursor 
CPM                   0.006   carboxypeptidase M precursor 
CPM                   0.006   carboxypeptidase M precursor 
CPM                   0.006   carboxypeptidase M precursor 
CPXM1                 0.006   carboxypeptidase X, member 1 precursor 
LRFN5                 0.006   leucine rich repeat and fibronectin type III domain ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press