Search of human proteins with 4501859

Search of human proteins with 4501859

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4501859 acyl-Coenzyme A dehydrogenase, short/branched chain
precursor [Homo sapiens]
         (432 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4501859 acyl-Coenzyme A dehydrogenase, short/branched chain p...   857   0.0  
gi|4557233 short-chain acyl-CoA dehydrogenase precursor [Homo sa...   286   2e-77
gi|187960098 medium-chain acyl-CoA dehydrogenase isoform b precu...   245   6e-65
gi|4557231 medium-chain acyl-CoA dehydrogenase isoform a precurs...   245   6e-65
gi|226958412 isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo...   244   1e-64
gi|21361497 acyl-Coenzyme A dehydrogenase family, member 9 [Homo...   229   3e-60
gi|226958414 isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...   226   4e-59
gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo ...   224   9e-59
gi|4501857 long-chain acyl-CoA dehydrogenase precursor [Homo sap...   218   6e-57
gi|4557235 acyl-Coenzyme A dehydrogenase, very long chain isofor...   207   2e-53
gi|76496475 acyl-Coenzyme A dehydrogenase, very long chain isofo...   207   2e-53
gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor...   155   5e-38
gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor...   151   1e-36
gi|211971008 acyl-Coenzyme A dehydrogenase family, member 10 iso...   126   3e-29
gi|48976061 acyl-Coenzyme A dehydrogenase family, member 10 isof...   126   3e-29
gi|38505218 putative acyl-CoA dehydrogenase [Homo sapiens]            123   3e-28
gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens]             79   8e-15
gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens]             66   7e-11
gi|218563752 acyl-Coenzyme A oxidase-like 1 [Homo sapiens]             66   7e-11
gi|211971012 acyl-Coenzyme A dehydrogenase family, member 10 iso...    60   3e-09
gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens]        59   7e-09
gi|156104864 acyl-Coenzyme A oxidase 3 isoform a [Homo sapiens]        59   7e-09
gi|30089972 acyl-Coenzyme A oxidase 1 isoform a [Homo sapiens]         40   0.004
gi|38569457 solute carrier family 12, member 8 [Homo sapiens]          35   0.13 
gi|4501869 acyl-Coenzyme A oxidase 2 [Homo sapiens]                    34   0.23 
gi|30089974 acyl-Coenzyme A oxidase 1 isoform b [Homo sapiens]         33   0.38 
gi|67782324 transforming growth factor, beta receptor II isoform...    30   5.6  
gi|32454739 tripartite motif-containing 3 [Homo sapiens]               29   9.5  
gi|32454737 tripartite motif-containing 3 [Homo sapiens]               29   9.5  
gi|4505941 DNA directed RNA polymerase II polypeptide B [Homo sa...    29   9.5  

>gi|4501859 acyl-Coenzyme A dehydrogenase, short/branched chain
           precursor [Homo sapiens]
          Length = 432

 Score =  857 bits (2215), Expect = 0.0
 Identities = 432/432 (100%), Positives = 432/432 (100%)

Query: 1   MEGLAVRLLRGSRLLRRNFLTCLSSWKIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDE 60
           MEGLAVRLLRGSRLLRRNFLTCLSSWKIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDE
Sbjct: 1   MEGLAVRLLRGSRLLRRNFLTCLSSWKIPPHVSKSSQSEALLNITNNGIHFAPLQTFTDE 60

Query: 61  EMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLS 120
           EMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLS
Sbjct: 61  EMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLS 120

Query: 121 TVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAG 180
           TVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAG
Sbjct: 121 TVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAG 180

Query: 181 AGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRD 240
           AGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRD
Sbjct: 181 AGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRD 240

Query: 241 TPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQ 300
           TPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQ
Sbjct: 241 TPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQ 300

Query: 301 MLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAG 360
           MLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAG
Sbjct: 301 MLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAG 360

Query: 361 KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420
           KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ
Sbjct: 361 KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420

Query: 421 LNTIAKHIDAEY 432
           LNTIAKHIDAEY
Sbjct: 421 LNTIAKHIDAEY 432


>gi|4557233 short-chain acyl-CoA dehydrogenase precursor [Homo
           sapiens]
          Length = 412

 Score =  286 bits (733), Expect = 2e-77
 Identities = 154/375 (41%), Positives = 236/375 (62%), Gaps = 1/375 (0%)

Query: 59  DEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASF 118
           +   M+  + + FA++++ P+ + +D+      + ++ +   GL+ ++V  E GG G  +
Sbjct: 36  ETHQMLLQTCRDFAEKELFPIAAQVDKEHLFPAAQVKKMGGLGLLAMDVPEELGGAGLDY 95

Query: 119 LSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLS 177
           L+  + +EE+++  AS  V   + N+L    I K G++EQK  ++   T+ +K+G F LS
Sbjct: 96  LAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFALS 155

Query: 178 EAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLV 237
           E G GSD+ A  T A  EGD +VLNG+K WI++A  A   +V A+ D  +  KGI++FLV
Sbjct: 156 EPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKGISAFLV 215

Query: 238 DRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGI 297
              TPGL +GK E+KLG+R SST  L FE+ ++P+ +ILG+ G G+K A+ +L+ GRIGI
Sbjct: 216 PMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGI 275

Query: 298 AAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLL 357
           A+Q LG+AQ   D  + Y + R+ FG  L   Q +Q ++A +A  LE+ARLLT+ AA L 
Sbjct: 276 ASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLK 335

Query: 358 EAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGAS 417
           +  KPFIKEA+MAK  ASE A   + + I+ +GG+GY  + P E+++RDA+I  IYEG S
Sbjct: 336 DNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEGTS 395

Query: 418 NIQLNTIAKHIDAEY 432
            IQ   IA H+   Y
Sbjct: 396 EIQRLVIAGHLLRSY 410


>gi|187960098 medium-chain acyl-CoA dehydrogenase isoform b
           precursor [Homo sapiens]
          Length = 425

 Score =  245 bits (625), Expect = 6e-65
 Identities = 141/378 (37%), Positives = 219/378 (57%), Gaps = 6/378 (1%)

Query: 57  FTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGA 116
           FT+++   +++ +KFA+E+I P+ +  D+  +    +I+  ++ GLM   +    GG G 
Sbjct: 45  FTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGL 104

Query: 117 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVG-SFC 175
                 L+ EELA     V    E  N+L    I   G ++QK  YL ++T E +  ++C
Sbjct: 105 GTFDACLISEELAYGCTGVQTAIE-GNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYC 163

Query: 176 LSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDP---TIGYKGI 232
           ++E GAGSD   +KT+A+K+GD Y++NG KMWI++   A  + ++A  DP       K  
Sbjct: 164 VTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAF 223

Query: 233 TSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNE 292
           T F+V+ DTPG+ IG+ E  +G R S T  + FE+VKVP+ N+L   G G+K A+G+ ++
Sbjct: 224 TGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDK 283

Query: 293 GRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYN 352
            R  +AA  +GLAQ   D    Y  ER  FGK L + Q +   +A +A ++E AR+    
Sbjct: 284 TRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQR 343

Query: 353 AARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTI 412
           AA  +++G+     AS+AK +A +IA Q  +  ++ +GG G+  +YPVEK  RDAKI  I
Sbjct: 344 AAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQI 403

Query: 413 YEGASNIQLNTIAK-HID 429
           YEG S IQ   +A+ HID
Sbjct: 404 YEGTSQIQRLIVAREHID 421


>gi|4557231 medium-chain acyl-CoA dehydrogenase isoform a precursor
           [Homo sapiens]
          Length = 421

 Score =  245 bits (625), Expect = 6e-65
 Identities = 141/378 (37%), Positives = 219/378 (57%), Gaps = 6/378 (1%)

Query: 57  FTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGA 116
           FT+++   +++ +KFA+E+I P+ +  D+  +    +I+  ++ GLM   +    GG G 
Sbjct: 41  FTEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCGGLGL 100

Query: 117 SFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVG-SFC 175
                 L+ EELA     V    E  N+L    I   G ++QK  YL ++T E +  ++C
Sbjct: 101 GTFDACLISEELAYGCTGVQTAIE-GNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYC 159

Query: 176 LSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDP---TIGYKGI 232
           ++E GAGSD   +KT+A+K+GD Y++NG KMWI++   A  + ++A  DP       K  
Sbjct: 160 VTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAF 219

Query: 233 TSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNE 292
           T F+V+ DTPG+ IG+ E  +G R S T  + FE+VKVP+ N+L   G G+K A+G+ ++
Sbjct: 220 TGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDK 279

Query: 293 GRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYN 352
            R  +AA  +GLAQ   D    Y  ER  FGK L + Q +   +A +A ++E AR+    
Sbjct: 280 TRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQR 339

Query: 353 AARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTI 412
           AA  +++G+     AS+AK +A +IA Q  +  ++ +GG G+  +YPVEK  RDAKI  I
Sbjct: 340 AAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQI 399

Query: 413 YEGASNIQLNTIAK-HID 429
           YEG S IQ   +A+ HID
Sbjct: 400 YEGTSQIQRLIVAREHID 417


>gi|226958412 isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo
           sapiens]
          Length = 426

 Score =  244 bits (622), Expect = 1e-64
 Identities = 139/418 (33%), Positives = 240/418 (57%), Gaps = 15/418 (3%)

Query: 23  LSSWKIPPHVSK--SSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLV 80
           ++SW++ P ++   S ++ +LL + +       +   ++E+  ++ ++ KF QE +AP  
Sbjct: 15  VASWRLRPPLAGFVSQRAHSLLPVDD------AINGLSEEQRQLRQTMAKFLQEHLAPKA 68

Query: 81  STMDENSKME--KSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAV- 137
             +D +++ +  +   + L   G++GI    +YGG+G  +L  VLV+EE+++   +V + 
Sbjct: 69  QEIDRSNEFKNLREFWKQLGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLS 128

Query: 138 FCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEG 196
           +    N  IN L+R +G E QK  YLP+L + E +G+  +SE  AGSD  ++K +A+K+G
Sbjct: 129 YGAHSNLCINQLVR-NGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKG 187

Query: 197 DYYVLNGSKMWISSAEHAGLFLVMANVDPTI--GYKGITSFLVDRDTPGLHIGKPENKLG 254
           ++Y+LNG+K WI++   A + +V A  D       +GIT+F+V++  PG    K  +KLG
Sbjct: 188 NHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLG 247

Query: 255 LRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIP 314
           +R S+TC L FE+ K+P ANILG    G    +  L+  R+ +A   LGL Q   D+TIP
Sbjct: 248 MRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIP 307

Query: 315 YIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYA 374
           Y+  R  FG+++  FQ +Q ++A + T+L A R   YN A+  + G    K+ +    Y+
Sbjct: 308 YLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYS 367

Query: 375 SEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY 432
           +E A Q     I+  GG GY  D+P+ ++ RDAK+  I  G S ++   I +  +A++
Sbjct: 368 AECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 425


>gi|21361497 acyl-Coenzyme A dehydrogenase family, member 9 [Homo
           sapiens]
          Length = 621

 Score =  229 bits (585), Expect = 3e-60
 Identities = 140/362 (38%), Positives = 213/362 (58%), Gaps = 14/362 (3%)

Query: 68  VKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLV-IE 126
           V+KF  E++      +D+  K+    ++ L   GL G++V  EYGG G  F +T+   + 
Sbjct: 74  VEKFFTEEVDS--RKIDQEGKIPDETLEKLKSLGLFGLQVPEEYGGLG--FSNTMYSRLG 129

Query: 127 ELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDS 185
           E+  +D S+ V       +    I   GTEEQKA YLP+L + E + +FCL+E  +GSD+
Sbjct: 130 EIISMDGSITVTLAAHQAIGLKGIILAGTEEQKAKYLPKLASGEHIAAFCLTEPASGSDA 189

Query: 186 FALKTRADKEGD--YYVLNGSKMWISSAEHAGLFLVMAN---VDPTIGYKG-ITSFLVDR 239
            ++++RA    D  +Y+LNGSK+WI++   A +F V A    VD     K  IT+F+V+R
Sbjct: 190 ASIRSRATLSEDKKHYILNGSKVWITNGGLANIFTVFAKTEVVDSDGSVKDKITAFIVER 249

Query: 240 DTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAA 299
           D  G+  GKPE+KLG+R S+TC + FEN K+P  NILG++G G+K A+  LN GR  + +
Sbjct: 250 DFGGVTNGKPEDKLGIRGSNTCEVHFENTKIPVENILGEVGDGFKVAMNILNSGRFSMGS 309

Query: 300 QMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLL-E 358
            + GL +   + T  Y   R QF KRL +F  +Q + A +A +      +TY  A +L +
Sbjct: 310 VVAGLLKRLIEMTAEYACTRKQFNKRLSEFGLIQEKFALMAQKAYVMESMTYLTAGMLDQ 369

Query: 359 AGKPFIK-EASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGAS 417
            G P    EA+M K ++SE A Q  S+ ++ +GG+GYT+DYP E+  RD +I  I+EG +
Sbjct: 370 PGFPDCSIEAAMVKVFSSEAAWQCVSEALQILGGLGYTRDYPYERILRDTRILLIFEGTN 429

Query: 418 NI 419
            I
Sbjct: 430 EI 431


>gi|226958414 isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo
           sapiens]
          Length = 396

 Score =  226 bits (575), Expect = 4e-59
 Identities = 124/336 (36%), Positives = 198/336 (58%), Gaps = 5/336 (1%)

Query: 101 GLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAV-FCEIQNTLINTLIRKHGTEEQK 159
           G++GI    +YGG+G  +L  VLV+EE+++   +V + +    N  IN L+R +G E QK
Sbjct: 61  GVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVR-NGNEAQK 119

Query: 160 ATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFL 218
             YLP+L + E +G+  +SE  AGSD  ++K +A+K+G++Y+LNG+K WI++   A + +
Sbjct: 120 EKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLI 179

Query: 219 VMANVDPTI--GYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANIL 276
           V A  D       +GIT+F+V++  PG    K  +KLG+R S+TC L FE+ K+P ANIL
Sbjct: 180 VYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANIL 239

Query: 277 GQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQV 336
           G    G    +  L+  R+ +A   LGL Q   D+TIPY+  R  FG+++  FQ +Q ++
Sbjct: 240 GHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQGKM 299

Query: 337 AHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTK 396
           A + T+L A R   YN A+  + G    K+ +    Y++E A Q     I+  GG GY  
Sbjct: 300 ADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYIN 359

Query: 397 DYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY 432
           D+P+ ++ RDAK+  I  G S ++   I +  +A++
Sbjct: 360 DFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 395


>gi|7656849 acyl-Coenzyme A dehydrogenase family, member 8 [Homo
           sapiens]
          Length = 415

 Score =  224 bits (572), Expect = 9e-59
 Identities = 136/378 (35%), Positives = 208/378 (55%), Gaps = 4/378 (1%)

Query: 53  PLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYG 112
           P     +E+   +     FA  ++AP ++  D+       V++   Q G  G+ +  + G
Sbjct: 37  PSMGLNEEQKEFQKVAFDFAAREMAPNMAEWDQKELFPVDVMRKAAQLGFGGVYIQTDVG 96

Query: 113 GTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKV 171
           G+G S L T ++ E LA    S   +  I N +   +I   G EEQ+  + P L T EK 
Sbjct: 97  GSGLSRLDTSVIFEALATGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKF 155

Query: 172 GSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKG 231
            S+CL+E G+GSD+ +L T A K+GD+Y+LNGSK +IS A  + +++VM       G KG
Sbjct: 156 ASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGP-GPKG 214

Query: 232 ITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLN 291
           I+  +V++ TPGL  GK E K+G  +  T  + FE+  VP AN +G  G G+  A+  LN
Sbjct: 215 ISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLN 274

Query: 292 EGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTY 351
            GRI IA+  LG A      T  ++  R QFG+ L   Q LQ  +A +AT+L AARL+  
Sbjct: 275 GGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVR 334

Query: 352 NAA-RLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIG 410
           NAA  L E  K  +   SMAK +A++      ++ ++  GG GY KDY V++Y RD+++ 
Sbjct: 335 NAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVH 394

Query: 411 TIYEGASNIQLNTIAKHI 428
            I EG++ +    I++ +
Sbjct: 395 QILEGSNEVMRILISRSL 412


>gi|4501857 long-chain acyl-CoA dehydrogenase precursor [Homo
           sapiens]
          Length = 430

 Score =  218 bits (556), Expect = 6e-57
 Identities = 142/438 (32%), Positives = 232/438 (52%), Gaps = 25/438 (5%)

Query: 4   LAVRLLRGSRLLRRNFLTCLSSWKIPPHV-----SKSSQSEAL-----LNITNNGIHFAP 53
           +A RLLRGS       L  L   + P  +     S S   E L       +T+ GI    
Sbjct: 1   MAARLLRGS-------LRVLGGHRAPRQLPAARCSHSGGEERLETPSAKKLTDIGIR--- 50

Query: 54  LQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGG 113
            + F+ E  + + SV+KF QE++ P  S  ++  ++ + V +   +QGL+G+ +    GG
Sbjct: 51  -RIFSPEHDIFRKSVRKFFQEEVIPHHSEWEKAGEVSREVWEKAGKQGLLGVNIAEHLGG 109

Query: 114 TGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VG 172
            G    S  +V EE A  + S   F  I + ++ + I  HG+EEQ   ++PQ+T  K +G
Sbjct: 110 IGGDLYSAAIVWEEQAYSNCSGPGF-SIHSGIVMSYITNHGSEEQIKHFIPQMTAGKCIG 168

Query: 173 SFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMA--NVDPTIGYK 230
           +  ++E GAGSD   +KT A K+G  ++LNGSK++IS+   + + +V+A  N +      
Sbjct: 169 AIAMTEPGAGSDLQGIKTNAKKDGSDWILNGSKVFISNGSLSDVVIVVAVTNHEAPSPAH 228

Query: 231 GITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSL 290
           GI+ FLV+    G   G+  +K+GL+A  T  L FE++++P + +LG+   G+ Y +  L
Sbjct: 229 GISLFLVENGMKGFIKGRKLHKMGLKAQDTAELFFEDIRLPASALLGEENKGFYYIMKEL 288

Query: 291 NEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLT 350
            + R+ IA   +  ++  F+ T  Y+K+R  FGK +   Q +QH++A + T +   R   
Sbjct: 289 PQERLLIADVAISASEFMFEETRNYVKQRKAFGKTVAHLQTVQHKLAELKTHICVTRAFV 348

Query: 351 YNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIG 410
            N  +L EA +     A MAKY+ASE+       C++  GG GY  +YP+ K + DA++ 
Sbjct: 349 DNCLQLHEAKRLDSATACMAKYWASELQNSVAYDCVQLHGGWGYMWEYPIAKAYVDARVQ 408

Query: 411 TIYEGASNIQLNTIAKHI 428
            IY G + I    IA+ I
Sbjct: 409 PIYGGTNEIMKELIAREI 426


>gi|4557235 acyl-Coenzyme A dehydrogenase, very long chain isoform 1
           precursor [Homo sapiens]
          Length = 655

 Score =  207 bits (526), Expect = 2e-53
 Identities = 124/361 (34%), Positives = 201/361 (55%), Gaps = 11/361 (3%)

Query: 68  VKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEE 127
           V +F +E   P  +  D    +E++  QGL + G  G++V  E GG G        ++E 
Sbjct: 109 VSRFFEEVNDPAKN--DALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEI 166

Query: 128 LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSF 186
           +   D  V +      ++    I   GT+ QK  YLP+L + E V +FCL+E  +GSD+ 
Sbjct: 167 VGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAA 226

Query: 187 ALKTRADKE--GDYYVLNGSKMWISSAEHAGLFLVMANV---DPTIGY--KGITSFLVDR 239
           +++T A     G YY LNGSK+WIS+   A +F V A     DP  G   + IT+F+V+R
Sbjct: 227 SIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVER 286

Query: 240 DTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAA 299
              G+  G PE K+G++AS+T  + F+ V+VP  N+LG++G G+K A+  LN GR G+AA
Sbjct: 287 GFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA 346

Query: 300 QMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEA 359
            + G  +G     + +   R QFG+++ +F  +Q ++A +         + Y  +  ++ 
Sbjct: 347 ALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQ 406

Query: 360 G-KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASN 418
           G   F  EA+++K + SE A + T +CI+ MGG+G+ K+  VE+  RD +I  I+EG ++
Sbjct: 407 GATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 466

Query: 419 I 419
           I
Sbjct: 467 I 467


>gi|76496475 acyl-Coenzyme A dehydrogenase, very long chain isoform
           2 precursor [Homo sapiens]
          Length = 633

 Score =  207 bits (526), Expect = 2e-53
 Identities = 124/361 (34%), Positives = 201/361 (55%), Gaps = 11/361 (3%)

Query: 68  VKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEE 127
           V +F +E   P  +  D    +E++  QGL + G  G++V  E GG G        ++E 
Sbjct: 87  VSRFFEEVNDPAKN--DALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEI 144

Query: 128 LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSF 186
           +   D  V +      ++    I   GT+ QK  YLP+L + E V +FCL+E  +GSD+ 
Sbjct: 145 VGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAA 204

Query: 187 ALKTRADKE--GDYYVLNGSKMWISSAEHAGLFLVMANV---DPTIGY--KGITSFLVDR 239
           +++T A     G YY LNGSK+WIS+   A +F V A     DP  G   + IT+F+V+R
Sbjct: 205 SIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVER 264

Query: 240 DTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAA 299
              G+  G PE K+G++AS+T  + F+ V+VP  N+LG++G G+K A+  LN GR G+AA
Sbjct: 265 GFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAA 324

Query: 300 QMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEA 359
            + G  +G     + +   R QFG+++ +F  +Q ++A +         + Y  +  ++ 
Sbjct: 325 ALAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQ 384

Query: 360 G-KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASN 418
           G   F  EA+++K + SE A + T +CI+ MGG+G+ K+  VE+  RD +I  I+EG ++
Sbjct: 385 GATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTND 444

Query: 419 I 419
           I
Sbjct: 445 I 445


>gi|4503943 glutaryl-Coenzyme A dehydrogenase isoform a precursor
           [Homo sapiens]
          Length = 438

 Score =  155 bits (393), Expect = 5e-38
 Identities = 109/378 (28%), Positives = 190/378 (50%), Gaps = 11/378 (2%)

Query: 55  QTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGT 114
           +  T +E++I+ + + + QE++ P +   + N    + +I  + + G++G  +   YG  
Sbjct: 58  EQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKG-YGCA 116

Query: 115 GASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGS 173
           G S ++  L+  EL +VD+       +Q++L+   I  +G+EEQ+  YLPQL   E +G 
Sbjct: 117 GVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGC 176

Query: 174 FCLSEAGAGSDSFALKTRA--DKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKG 231
           F L+E  +GSD  +++TRA  +     Y LNG+K WI+++  A LF+V A  +       
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGC---- 232

Query: 232 ITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANIL-GQIGHGYKYAIGSL 290
           I  FL+++   GL   + + K  LRAS+T  +  + V+VPE N+L G    G  +  G L
Sbjct: 233 IRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPF--GCL 290

Query: 291 NEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLT 350
           N  R GIA  +LG ++ C      Y  +R+QFG  L   Q +Q ++A + T++       
Sbjct: 291 NNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHAC 350

Query: 351 YNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIG 410
               RL +  K   +  S+ K      A     +  + +GG G + +Y V ++  + +  
Sbjct: 351 LQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAV 410

Query: 411 TIYEGASNIQLNTIAKHI 428
             YEG  +I    + + I
Sbjct: 411 NTYEGTHDIHALILGRAI 428


>gi|7669494 glutaryl-Coenzyme A dehydrogenase isoform b precursor
           [Homo sapiens]
          Length = 428

 Score =  151 bits (382), Expect = 1e-36
 Identities = 106/364 (29%), Positives = 184/364 (50%), Gaps = 11/364 (3%)

Query: 55  QTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEKSVIQGLFQQGLMGIEVDPEYGGT 114
           +  T +E++I+ + + + QE++ P +   + N    + +I  + + G++G  +   YG  
Sbjct: 58  EQLTTDEILIRDTFRTYCQERLMPRILLANRNEVFHREIISEMGELGVLGPTIKG-YGCA 116

Query: 115 GASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTT-EKVGS 173
           G S ++  L+  EL +VD+       +Q++L+   I  +G+EEQ+  YLPQL   E +G 
Sbjct: 117 GVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGC 176

Query: 174 FCLSEAGAGSDSFALKTRA--DKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKG 231
           F L+E  +GSD  +++TRA  +     Y LNG+K WI+++  A LF+V A  +       
Sbjct: 177 FGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCEDGC---- 232

Query: 232 ITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANIL-GQIGHGYKYAIGSL 290
           I  FL+++   GL   + + K  LRAS+T  +  + V+VPE N+L G    G  +  G L
Sbjct: 233 IRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPF--GCL 290

Query: 291 NEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLT 350
           N  R GIA  +LG ++ C      Y  +R+QFG  L   Q +Q ++A + T++       
Sbjct: 291 NNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHAC 350

Query: 351 YNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIG 410
               RL +  K   +  S+ K      A     +  + +GG G + +Y V ++  + +  
Sbjct: 351 LQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAV 410

Query: 411 TIYE 414
             YE
Sbjct: 411 NTYE 414


>gi|211971008 acyl-Coenzyme A dehydrogenase family, member 10 isoform
            a [Homo sapiens]
          Length = 1090

 Score =  126 bits (317), Expect = 3e-29
 Identities = 110/406 (27%), Positives = 188/406 (46%), Gaps = 18/406 (4%)

Query: 32   VSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEK 91
            +S  S S  +  + +   HF   + +  E  + +S     A+   +PL+  + E +K E 
Sbjct: 685  ISPESLSPPVRELYHRLKHFMEQRVYPAEPEL-QSHQASAARWSPSPLIEDLKEKAKAE- 742

Query: 92   SVIQGLFQQGLMGIEVDPEYG-GTGASFLSTVLVIEELA-KVDASVAVFCEIQNTLINTL 149
                GL+    + +E DPE   G G + +    + E +   + A     C   +T    L
Sbjct: 743  ----GLWNL-FLPLEADPEKKYGAGLTNVEYAHLCELMGTSLYAPEVCNCSAPDTGNMEL 797

Query: 150  IRKHGTEEQKATYLPQLTTEKVGS-FCLSEAG-AGSDSFALKTRADKEGDYYVLNGSKMW 207
            + ++GTE QKA +L  L   K  S F ++E   A SD+  ++    +E  +YV+NG K W
Sbjct: 798  LVRYGTEAQKARWLIPLLEGKARSCFAMTEPQVASSDATNIEASIREEDSFYVINGHKWW 857

Query: 208  ISSA--EHAGLFLVMANVDPTIG-YKGITSFLVDRDTPGLHIGKPENKLGLRAS--STCP 262
            I+        L + M   DP    ++  +  LV  DTPG+ I +P    GL  +      
Sbjct: 858  ITGILDPRCQLCVFMGKTDPHAPRHRQQSVLLVPMDTPGIKIIRPLTVYGLEDAPGGHGE 917

Query: 263  LTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQF 322
            + FE+V+VP+ N++   G G++ A G L  GRI    +++G ++         +K R+ F
Sbjct: 918  VRFEHVRVPKENMVLGPGRGFEIAQGRLGPGRIHHCMRLIGFSERALALMKARVKSRLAF 977

Query: 323  GKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLE--AGKPFIKEASMAKYYASEIAGQ 380
            GK L +   +   +A    ++E ARLL   AA L++    K    + +M K  A  +A +
Sbjct: 978  GKPLVEQGTVLADIAQSRVEIEQARLLVLRAAHLMDLAGNKAAALDIAMIKMVAPSMASR 1037

Query: 381  TTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAK 426
               + I+  G  G + DYP+ ++F  A+     +G   +   T+AK
Sbjct: 1038 VIDRAIQAFGAAGLSSDYPLAQFFTWARALRFADGPDEVHRATVAK 1083


>gi|48976061 acyl-Coenzyme A dehydrogenase family, member 10 isoform b
            [Homo sapiens]
          Length = 1059

 Score =  126 bits (317), Expect = 3e-29
 Identities = 110/406 (27%), Positives = 188/406 (46%), Gaps = 18/406 (4%)

Query: 32   VSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEK 91
            +S  S S  +  + +   HF   + +  E  + +S     A+   +PL+  + E +K E 
Sbjct: 654  ISPESLSPPVRELYHRLKHFMEQRVYPAEPEL-QSHQASAARWSPSPLIEDLKEKAKAE- 711

Query: 92   SVIQGLFQQGLMGIEVDPEYG-GTGASFLSTVLVIEELA-KVDASVAVFCEIQNTLINTL 149
                GL+    + +E DPE   G G + +    + E +   + A     C   +T    L
Sbjct: 712  ----GLWNL-FLPLEADPEKKYGAGLTNVEYAHLCELMGTSLYAPEVCNCSAPDTGNMEL 766

Query: 150  IRKHGTEEQKATYLPQLTTEKVGS-FCLSEAG-AGSDSFALKTRADKEGDYYVLNGSKMW 207
            + ++GTE QKA +L  L   K  S F ++E   A SD+  ++    +E  +YV+NG K W
Sbjct: 767  LVRYGTEAQKARWLIPLLEGKARSCFAMTEPQVASSDATNIEASIREEDSFYVINGHKWW 826

Query: 208  ISSA--EHAGLFLVMANVDPTIG-YKGITSFLVDRDTPGLHIGKPENKLGLRAS--STCP 262
            I+        L + M   DP    ++  +  LV  DTPG+ I +P    GL  +      
Sbjct: 827  ITGILDPRCQLCVFMGKTDPHAPRHRQQSVLLVPMDTPGIKIIRPLTVYGLEDAPGGHGE 886

Query: 263  LTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQF 322
            + FE+V+VP+ N++   G G++ A G L  GRI    +++G ++         +K R+ F
Sbjct: 887  VRFEHVRVPKENMVLGPGRGFEIAQGRLGPGRIHHCMRLIGFSERALALMKARVKSRLAF 946

Query: 323  GKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLE--AGKPFIKEASMAKYYASEIAGQ 380
            GK L +   +   +A    ++E ARLL   AA L++    K    + +M K  A  +A +
Sbjct: 947  GKPLVEQGTVLADIAQSRVEIEQARLLVLRAAHLMDLAGNKAAALDIAMIKMVAPSMASR 1006

Query: 381  TTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAK 426
               + I+  G  G + DYP+ ++F  A+     +G   +   T+AK
Sbjct: 1007 VIDRAIQAFGAAGLSSDYPLAQFFTWARALRFADGPDEVHRATVAK 1052


>gi|38505218 putative acyl-CoA dehydrogenase [Homo sapiens]
          Length = 780

 Score =  123 bits (309), Expect = 3e-28
 Identities = 113/426 (26%), Positives = 191/426 (44%), Gaps = 46/426 (10%)

Query: 32  VSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDE------ 85
           +SK + S  L  I   G  F  +QT   +E++IK  VK F ++ I P    + E      
Sbjct: 354 LSKRTFSTVLPQIDTTGQLF--VQTRKGQEVLIK--VKHFMKQHILPAEKEVTEFYVQNE 409

Query: 86  ------------NSKMEKSVIQGLFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDA 133
                       +   E + ++GL+   L  +        +G S +   L+ EE  K   
Sbjct: 410 NSVDKWGKPLVIDKLKEMAKVEGLWNLFLPAV--------SGLSHVDYALIAEETGKCFF 461

Query: 134 SVAVF-CEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVGS-FCLSEAG-AGSDSFALKT 190
           +  VF C+  +T    ++  +G+EEQK  +L  L    + S FC++E   A SD+  ++ 
Sbjct: 462 APDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIEC 521

Query: 191 RADKEGDYYVLNGSKMWISSAEH--AGLFLVMANVDPTI--GYKGITSFLVDRDTPGLHI 246
              ++ D YV+NG K W S A +    + +V+     T    +K  +  LV  +TPG+ I
Sbjct: 522 SIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKI 581

Query: 247 GKPENKLGLRAS---STCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLG 303
            +P +  G   +       + F  V+VP  N++   G G++ + G L  GRI    + +G
Sbjct: 582 IRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVG 641

Query: 304 LAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLE----A 359
           LA+           +RI F K+L+  + + H +A     +E  RLLT  AA  ++    A
Sbjct: 642 LAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSA 701

Query: 360 GKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNI 419
           G    KE +M K  A     +     I+  GG G ++DYP+   +   ++  + +G   +
Sbjct: 702 GAK--KEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEV 759

Query: 420 QLNTIA 425
            L+ IA
Sbjct: 760 HLSAIA 765


>gi|157502163 acyl-Coenzyme A oxidase-like 2 [Homo sapiens]
          Length = 547

 Score = 79.0 bits (193), Expect = 8e-15
 Identities = 92/363 (25%), Positives = 145/363 (39%), Gaps = 47/363 (12%)

Query: 117 SFLSTVLVIEE-LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSF 174
           +F+S  LVI E L+  D +  V C I   L    IR  G+ E    +   L  +K  G F
Sbjct: 31  NFVSRSLVIGEVLSMADMATGVKCGIIYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMF 90

Query: 175 CLSEAGAGSDSFALKTRA--DKEGDYYVL-----NGSKMWISSAEHAGLFLVMANVDPTI 227
            ++E G GS++  ++T A  D     +V+     N  KM+I +A +     V A +    
Sbjct: 91  AMTERGHGSNARGIQTEATFDLSAQEFVIDTPCENAEKMYIGNAMYGNYAAVFAQLIIDG 150

Query: 228 GYKGITSFLVD-RDT-----PGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGH 281
             +G   F+V  RD      PG+       K GL       L F+ V++P  N+L + G 
Sbjct: 151 RSQGPHCFIVPVRDENGSLYPGVTAIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGS 210

Query: 282 ----------------GYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFG-K 324
                            +   + +L   R+ +A Q +G  +      I Y   R QFG K
Sbjct: 211 VAPDGQYHSPIRNKSARFNAMLAALTPSRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPK 270

Query: 325 RLFDFQGLQHQ------VAHVATQLEAARLLTYNAARLLE---AGKPFIKEASMAKYYAS 375
              + + ++HQ      + H+AT L    +  Y  A L E    GK  +   S+    A 
Sbjct: 271 TKEEVKIIEHQTQTLRLMPHLATALALTFVSRYAGALLDEDVFQGKELVNSRSLQALVAG 330

Query: 376 EIAGQTTSK------CIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHID 429
             A  T         C E  GG+GY  +  +     D  +   +EG   + L  + + + 
Sbjct: 331 LKAYSTWENIRCLQDCRECTGGMGYMMENRISGLKCDTDVFATFEGDDVVMLQVVGRELL 390

Query: 430 AEY 432
           A+Y
Sbjct: 391 AQY 393


>gi|218563754 acyl-Coenzyme A oxidase-like 3 [Homo sapiens]
          Length = 517

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 89/343 (25%), Positives = 134/343 (39%), Gaps = 55/343 (16%)

Query: 117 SFLSTVLVIEE-LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSF 174
           +F+S  LVI E L+  D +  V C I   L    IR  G+ E    +   L  +K  G F
Sbjct: 31  NFVSRSLVIGEVLSMADMATGVKCGIIYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMF 90

Query: 175 CLSEAGAGSDSFALKTRA--DKEGDYYVL-----NGSKMWISSAEHAGLFLVMANVDPTI 227
            ++E G GS++  ++T A  D     +V+     N  KM+I +A +     V A +    
Sbjct: 91  AMTERGHGSNARGIQTEATFDLSAQEFVIDTPCENAEKMYIGNAMYGNYAAVFAQLIIDG 150

Query: 228 GYKGITSFLVD-RDT-----PGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGH 281
             +G   F+V  RD      PG+       K GL       L F+ V++P  N+L + G 
Sbjct: 151 RSQGPHCFIVPVRDENGSLYPGVTAIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGS 210

Query: 282 ----------------GYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFG-K 324
                            +   + +L   R+ +A Q +G  +      I Y   R QFG K
Sbjct: 211 VAPDGQYHSPIRNKSARFNAMLAALTPSRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPK 270

Query: 325 RLFDFQGLQHQ------VAHVATQLEAARLLTYNAARLLE---AGKPFIKEASMAKYYAS 375
              + + ++HQ      + H+AT L    +  Y  A L E    GK  +   S+    A 
Sbjct: 271 TKEEVKIIEHQTQTLRLMPHLATALALTFVSRYAGALLDEDVFQGKELVNSRSLQALVAG 330

Query: 376 EIAGQT------TSKCIEWMGGV--------GYTKDYPVEKYF 404
             A  T         C E  GG+         YTK Y  +  F
Sbjct: 331 LKAYSTWENIRCLQDCRECTGGMVVGRELLAQYTKQYEEKPLF 373


>gi|218563752 acyl-Coenzyme A oxidase-like 1 [Homo sapiens]
          Length = 580

 Score = 65.9 bits (159), Expect = 7e-11
 Identities = 89/343 (25%), Positives = 134/343 (39%), Gaps = 55/343 (16%)

Query: 117 SFLSTVLVIEE-LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSF 174
           +F+S  LVI E L+  D +  V C I   L    IR  G+ E    +   L  +K  G F
Sbjct: 31  NFVSRSLVIGEVLSMADMATGVKCGIIYWLFGGAIRNLGSPEHVTKWFQPLQEQKYTGMF 90

Query: 175 CLSEAGAGSDSFALKTRA--DKEGDYYVL-----NGSKMWISSAEHAGLFLVMANVDPTI 227
            ++E G GS++  ++T A  D     +V+     N  KM+I +A +     V A +    
Sbjct: 91  AMTERGHGSNARGIQTEATFDLSAQEFVIDTPCENAEKMYIGNAMYGNYAAVFAQLIIDG 150

Query: 228 GYKGITSFLVD-RDT-----PGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGH 281
             +G   F+V  RD      PG+       K GL       L F+ V++P  N+L + G 
Sbjct: 151 RSQGPHCFIVPVRDENGSLYPGVTAIDMMYKEGLHGVDNGILIFDKVRIPRENLLDKFGS 210

Query: 282 ----------------GYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFG-K 324
                            +   + +L   R+ +A Q +G  +      I Y   R QFG K
Sbjct: 211 VAPDGQYHSPIRNKSARFNAMLAALTPSRLAVAFQAMGAMKLGLTIAIRYSHSRRQFGPK 270

Query: 325 RLFDFQGLQHQ------VAHVATQLEAARLLTYNAARLLE---AGKPFIKEASMAKYYAS 375
              + + ++HQ      + H+AT L    +  Y  A L E    GK  +   S+    A 
Sbjct: 271 TKEEVKIIEHQTQTLRLMPHLATALALTFVSRYAGALLDEDVFQGKELVNSRSLQALVAG 330

Query: 376 EIAGQT------TSKCIEWMGGV--------GYTKDYPVEKYF 404
             A  T         C E  GG+         YTK Y  +  F
Sbjct: 331 LKAYSTWENIRCLQDCRECTGGMVVGRELLAQYTKQYEEKPLF 373


>gi|211971012 acyl-Coenzyme A dehydrogenase family, member 10
           isoform c [Homo sapiens]
          Length = 890

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 14/237 (5%)

Query: 32  VSKSSQSEALLNITNNGIHFAPLQTFTDEEMMIKSSVKKFAQEQIAPLVSTMDENSKMEK 91
           +S  S S  +  + +   HF   + +  E  + +S     A+   +PL+  + E +K E 
Sbjct: 654 ISPESLSPPVRELYHRLKHFMEQRVYPAEPEL-QSHQASAARWSPSPLIEDLKEKAKAE- 711

Query: 92  SVIQGLFQQGLMGIEVDPEYG-GTGASFLSTVLVIEELA-KVDASVAVFCEIQNTLINTL 149
               GL+    + +E DPE   G G + +    + E +   + A     C   +T    L
Sbjct: 712 ----GLWNL-FLPLEADPEKKYGAGLTNVEYAHLCELMGTSLYAPEVCNCSAPDTGNMEL 766

Query: 150 IRKHGTEEQKATYLPQLTTEKVGS-FCLSEAG-AGSDSFALKTRADKEGDYYVLNGSKMW 207
           + ++GTE QKA +L  L   K  S F ++E   A SD+  ++    +E  +YV+NG K W
Sbjct: 767 LVRYGTEAQKARWLIPLLEGKARSCFAMTEPQVASSDATNIEASIREEDSFYVINGHKWW 826

Query: 208 ISSA--EHAGLFLVMANVDP-TIGYKGITSFLVDRDTPGLHIGKPENKLGLRASSTC 261
           I+        L + M   DP    ++  +  LV  DTPG+ I +P    GL  +  C
Sbjct: 827 ITGILDPRCQLCVFMGKTDPHAPRHRQQSVLLVPMDTPGIKIIRPLTVYGLEDAPGC 883


>gi|156104866 acyl-Coenzyme A oxidase 3 isoform b [Homo sapiens]
          Length = 624

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 84/368 (22%), Positives = 146/368 (39%), Gaps = 61/368 (16%)

Query: 119 LSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKV-GSFCLS 177
           L    +I+ L   D+S+A    + + +  + +   G+E    TY+ ++   ++ G F L+
Sbjct: 101 LKVPALIQCLGMYDSSLAAKYLLHSLVFGSAVYSSGSERH-LTYIQKIFRMEIFGCFALT 159

Query: 178 EAGAGSDSFALKTRA--DKEGDYYVLN-----GSKMWI----SSAEHAGLFLVMANVDPT 226
           E   GS++ A++T A  D   + ++++      +K W+     +A HA +F  +    P 
Sbjct: 160 ELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLC--VPG 217

Query: 227 IGYKGITSFLVD-RD------TPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQI 279
               G+  F+V  RD       PG+ +G    KLG          F  V+VP  ++L ++
Sbjct: 218 DQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRM 277

Query: 280 G----------------HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFG 323
           G                  +  ++GSL+ GR+ I +  +   +      + +   R QFG
Sbjct: 278 GDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRRQFG 337

Query: 324 K----------------RLFDFQGLQHQVAHVATQL-----EAARLLTY--NAARLLEAG 360
                            RL  +    + + H +  L     E  R L     +AR  E G
Sbjct: 338 PTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELG 397

Query: 361 KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420
           +     AS +K  AS    Q   +C E  GG GY     +     D      YEG +NI 
Sbjct: 398 REIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYEGDNNIL 457

Query: 421 LNTIAKHI 428
           L   + ++
Sbjct: 458 LQQTSNYL 465


>gi|156104864 acyl-Coenzyme A oxidase 3 isoform a [Homo sapiens]
          Length = 700

 Score = 59.3 bits (142), Expect = 7e-09
 Identities = 84/368 (22%), Positives = 146/368 (39%), Gaps = 61/368 (16%)

Query: 119 LSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKV-GSFCLS 177
           L    +I+ L   D+S+A    + + +  + +   G+E    TY+ ++   ++ G F L+
Sbjct: 101 LKVPALIQCLGMYDSSLAAKYLLHSLVFGSAVYSSGSERH-LTYIQKIFRMEIFGCFALT 159

Query: 178 EAGAGSDSFALKTRA--DKEGDYYVLN-----GSKMWI----SSAEHAGLFLVMANVDPT 226
           E   GS++ A++T A  D   + ++++      +K W+     +A HA +F  +    P 
Sbjct: 160 ELSHGSNTKAIRTTAHYDPATEEFIIHSPDFEAAKFWVGNMGKTATHAVVFAKLC--VPG 217

Query: 227 IGYKGITSFLVD-RD------TPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQI 279
               G+  F+V  RD       PG+ +G    KLG          F  V+VP  ++L ++
Sbjct: 218 DQCHGLHPFIVQIRDPKTLLPMPGVMVGDIGKKLGQNGLDNGFAMFHKVRVPRQSLLNRM 277

Query: 280 G----------------HGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFG 323
           G                  +  ++GSL+ GR+ I +  +   +      + +   R QFG
Sbjct: 278 GDVTPEGTYVSPFKDVRQRFGASLGSLSSGRVSIVSLAILNLKLAVAIALRFSATRRQFG 337

Query: 324 K----------------RLFDFQGLQHQVAHVATQL-----EAARLLTY--NAARLLEAG 360
                            RL  +    + + H +  L     E  R L     +AR  E G
Sbjct: 338 PTEEEEIPVLEYPMQQWRLLPYLAAVYALDHFSKSLFLDLVELQRGLASGDRSARQAELG 397

Query: 361 KPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQ 420
           +     AS +K  AS    Q   +C E  GG GY     +     D      YEG +NI 
Sbjct: 398 REIHALASASKPLASWTTQQGIQECREACGGHGYLAMNRLGVLRDDNDPNCTYEGDNNIL 457

Query: 421 LNTIAKHI 428
           L   + ++
Sbjct: 458 LQQTSNYL 465


>gi|30089972 acyl-Coenzyme A oxidase 1 isoform a [Homo sapiens]
          Length = 660

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 21/147 (14%)

Query: 148 TLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAGAGSDSFALKTRA--DKEGDYYVLNGS- 204
           TL+ +   E+Q+  ++P    E +G++  +E G G+    L+T A  D E   ++LN   
Sbjct: 110 TLLHQATAEQQERFFMPAWNLEIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNSPT 169

Query: 205 ----KMWI----SSAEHAGLFLVMANVDPTIGYKGITSFLV-------DRDTPGLHIGKP 249
               K W      ++ HA   +V+A +       G+ +F+V        +  PG+ +G  
Sbjct: 170 VTSIKWWPGGLGKTSNHA---IVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVGDI 226

Query: 250 ENKLGLRASSTCPLTFENVKVPEANIL 276
             K G        L  +N ++P  N+L
Sbjct: 227 GPKFGYDEIDNGYLKMDNHRIPRENML 253


>gi|38569457 solute carrier family 12, member 8 [Homo sapiens]
          Length = 714

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 15/130 (11%)

Query: 132 DASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAGAGSDSFALKTR 191
           D   A   E Q +  N    K    + + TY  QL  E     C     +G D F LK+R
Sbjct: 521 DRLPAASWEGQESCWNKQTSKSEGTQPEGTYGEQLVPE----LCNQSESSGEDFF-LKSR 575

Query: 192 ADKEGDY-----YVLNGSKMWISSAEHAGLFLVMANVD-----PTIGYKGITSFLVDRDT 241
             ++  +     +  +    W+S     G  L+M  +        +G   I  F + R +
Sbjct: 576 LQEQDVWRRSTSFYTHMCNPWVSLLGAVGSLLIMFVIQWVYTLVNMGVAAIVYFYIGRAS 635

Query: 242 PGLHIGKPEN 251
           PGLH+G   N
Sbjct: 636 PGLHLGSASN 645


>gi|4501869 acyl-Coenzyme A oxidase 2 [Homo sapiens]
          Length = 681

 Score = 34.3 bits (77), Expect = 0.23
 Identities = 70/333 (21%), Positives = 123/333 (36%), Gaps = 53/333 (15%)

Query: 150 IRKHGTEEQKATYLPQLTT-EKVGSFCLSEAGAGSDSFALKTRA--DKEGDYYV-----L 201
           +R  G+EEQ A + P     + + ++  +E G G+    L+T A  D     +V     L
Sbjct: 126 LRSLGSEEQIAKWDPLCKNIQIIATYAQTELGHGTYLQGLETEATYDAATQEFVIHSPTL 185

Query: 202 NGSKMWIS----SAEHAGLFLVMANVDPTIGYKGITSFLVD-------RDTPGLHIGKPE 250
             +K W      SA HA   LV A +  +   +G+ +F+V           PG+ IG   
Sbjct: 186 TATKWWPGDLGRSATHA---LVQAQLICSGARRGMHAFIVPIRSLQDHTPLPGIIIGDIG 242

Query: 251 NKLGLRASSTCPLTFENVKVPEANILGQIGH----GYKYAIGSLNEGRIGIAAQMLGLAQ 306
            K+    +    L   +V+VP  N+L +       G    +G+     + +    + L  
Sbjct: 243 PKMDFDQTDNGFLQLNHVRVPRENMLSRFAQVLPDGTYVKLGTAQSNYLPMVVVRVELLS 302

Query: 307 G------------CFDYTIPYIKERIQFG---KRLFDFQGLQHQV-----AHVATQLEAA 346
           G               Y++   + R++      ++ D+Q  Q ++        A    A 
Sbjct: 303 GEILPILQKACVIAMRYSVIRRQSRLRPSDPEAKVLDYQTQQQKLFPQLAISYAFHFLAV 362

Query: 347 RLLTY---NAARLLEAGKPFIKE----ASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYP 399
            LL +   +   +L     F+ E    ++  K   SE   Q    C    GG GY+K   
Sbjct: 363 SLLEFFQHSYTAILNQDFSFLPELHALSTGMKAMMSEFCTQGAEMCRRACGGHGYSKLSG 422

Query: 400 VEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY 432
           +            YEG + +    +A+ +   Y
Sbjct: 423 LPSLVTKLSASCTYEGENTVLYLQVARFLVKSY 455


>gi|30089974 acyl-Coenzyme A oxidase 1 isoform b [Homo sapiens]
          Length = 660

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 35/149 (23%), Positives = 64/149 (42%), Gaps = 21/149 (14%)

Query: 146 INTLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAGAGSDSFALKTRA--DKEGDYYVLNG 203
           I TL+ +  T +++   L     + +G++  +E G G+    L+T A  D E   ++LN 
Sbjct: 108 IPTLLNQGTTAQKEKWLLSSKGLQIIGTYAQTEMGHGTHLRGLETTATYDPETQEFILNS 167

Query: 204 S-----KMWIS----SAEHAGLFLVMANVDPTIGYKGITSFLVD-------RDTPGLHIG 247
                 K W      ++ HA   +V+A +       G+ +F+V        +  PG+ +G
Sbjct: 168 PTVTSIKWWPGGLGKTSNHA---IVLAQLITKGKCYGLHAFIVPIREIGTHKPLPGITVG 224

Query: 248 KPENKLGLRASSTCPLTFENVKVPEANIL 276
               K G        L  +N ++P  N+L
Sbjct: 225 DIGPKFGYDEIDNGYLKMDNHRIPRENML 253


>gi|67782324 transforming growth factor, beta receptor II isoform
          B precursor [Homo sapiens]
          Length = 567

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 8  LLRGSRLLRRNFLTCLSSWKIPPHVSKSSQSEALLNITNNGIHFAPLQTFTD 59
          LLRG   L     T ++S  IPPHV KS  ++ ++   N  + F  L  F D
Sbjct: 5  LLRGLWPLHIVLWTRIAS-TIPPHVQKSVNNDMIVTDNNGAVKFPQLCKFCD 55


>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 16/88 (18%)

Query: 193 DKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENK 252
           D  GD  V +    W+S     G F         +G KG+    VDR+    HI   +NK
Sbjct: 542 DTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVA---VDRNG---HIIVVDNK 595

Query: 253 LGLRASSTCPLTFENVKVPEANILGQIG 280
                 S C  TF+    P   ++G+ G
Sbjct: 596 ------SCCVFTFQ----PNGKLVGRFG 613


>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
          Length = 744

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 16/88 (18%)

Query: 193 DKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENK 252
           D  GD  V +    W+S     G F         +G KG+    VDR+    HI   +NK
Sbjct: 542 DTNGDIIVADYDNRWVSIFSPEGKFKTKIGAGRLMGPKGVA---VDRNG---HIIVVDNK 595

Query: 253 LGLRASSTCPLTFENVKVPEANILGQIG 280
                 S C  TF+    P   ++G+ G
Sbjct: 596 ------SCCVFTFQ----PNGKLVGRFG 613


>gi|4505941 DNA directed RNA polymerase II polypeptide B [Homo
           sapiens]
          Length = 1174

 Score = 28.9 bits (63), Expect = 9.5
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 14/156 (8%)

Query: 128 LAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEKVGSFCLSEAGAGSDSFA 187
           L  +  S  ++ +I  T+I     +  T+ QK T++ ++      ++CL       D   
Sbjct: 115 LRNLTYSAPLYVDITKTVIKEGEEQLQTQHQK-TFIGKIPIMLRSTYCLLNGLTDRDLCE 173

Query: 188 LKTRADKEGDYYVLNGSKMWISSAEH--AGLFLVMANVDPTIGYKG-ITSFLVDRDTPGL 244
           L       G Y+++NGS+  + + E        V A  D    Y G   S L +   P  
Sbjct: 174 LNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTS 233

Query: 245 HI----------GKPENKLGLRASSTCPLTFENVKV 270
            I          G  ++ +G R  +T P   + V +
Sbjct: 234 TIWVSMLARGGQGAKKSAIGQRIVATLPYIKQEVPI 269


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,526,107
Number of Sequences: 37866
Number of extensions: 578594
Number of successful extensions: 1385
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1311
Number of HSP's gapped (non-prelim): 31
length of query: 432
length of database: 18,247,518
effective HSP length: 105
effective length of query: 327
effective length of database: 14,271,588
effective search space: 4666809276
effective search space used: 4666809276
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.