Guide to the Human Genome
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Name: IVD Sequence: fasta or formatted (426aa) NCBI GI: 226958412
Description:

isovaleryl Coenzyme A dehydrogenase isoform 1

Referenced in:

Amino Acid Catabolism

Other entries for this name:
alt prot [396aa] isovaleryl Coenzyme A dehydrogenase isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         43           2
 C cysteine            2.1          9           1
 D aspartate           4.2         18           2
 E glutamate           5.9         25           2
 F phenylalanine       3.5         15           1
 G glycine            10.3         44           2
 H histidine           2.6         11           1
 I isoleucine          5.2         22           1
 K lysine              5.6         24           2
 L leucine            11.0         47           2
 M methionine          3.5         15           1
 N asparagine          4.7         20           1
 P proline             3.3         14           2
 Q glutamine           4.0         17           1
 R arginine            5.2         22           2
 S serine              4.9         21           1
 T threonine           3.3         14           1
 V valine              6.1         26           2
 W tryptophan          0.9          4           1
 Y tyrosine            3.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   isovaleryl Coenzyme A dehydrogenase isoform 1 [Homo... 
IVD                   0.911   isovaleryl Coenzyme A dehydrogenase isoform 2 [Homo...
ACADS                 0.279   short-chain acyl-CoA dehydrogenase precursor 
ACADSB                0.263   acyl-Coenzyme A dehydrogenase, short/branched chain p...
ACADL                 0.258   long-chain acyl-CoA dehydrogenase precursor 
ACADM                 0.243   medium-chain acyl-CoA dehydrogenase isoform b precu...
ACADM                 0.243   medium-chain acyl-CoA dehydrogenase isoform a precurs...
ACAD9                 0.235   acyl-Coenzyme A dehydrogenase family, member 9 [Homo...
ACAD8                 0.229   acyl-Coenzyme A dehydrogenase family, member 8 
ACADVL                0.217   acyl-Coenzyme A dehydrogenase, very long chain isofor...
ACADVL                0.217   acyl-Coenzyme A dehydrogenase, very long chain isofo...
GCDH                  0.162   glutaryl-Coenzyme A dehydrogenase isoform a precursor...
GCDH                  0.149   glutaryl-Coenzyme A dehydrogenase isoform b precursor...
ACAD10                0.085   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACAD10                0.085   acyl-Coenzyme A dehydrogenase family, member 10 isof...
ACAD11                0.076   putative acyl-CoA dehydrogenase 
ACAD10                0.049   acyl-Coenzyme A dehydrogenase family, member 10 iso...
ACOXL                 0.037   acyl-Coenzyme A oxidase-like 2 
ACOXL                 0.031   acyl-Coenzyme A oxidase-like 3 
ACOXL                 0.031   acyl-Coenzyme A oxidase-like 1 
ACOX3                 0.017   acyl-Coenzyme A oxidase 3 isoform b 
ACOX3                 0.017   acyl-Coenzyme A oxidase 3 isoform a 
ACOX1                 0.014   acyl-Coenzyme A oxidase 1 isoform b 
TRIM39                0.011   tripartite motif-containing 39 isoform 2 
TRIM39                0.011   tripartite motif-containing 39 isoform 1 
TRIM7                 0.007   tripartite motif-containing 7 isoform 1 
GPR20                 0.006   G protein-coupled receptor 20 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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