Guide to the Human Genome
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Name: FBXL22 Sequence: fasta or formatted (241aa) NCBI GI: 42794273
Description:

F-box and leucine-rich repeat protein 22

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         21           3
 C cysteine            3.3          8           1
 D aspartate           4.6         11           1
 E glutamate           4.6         11           2
 F phenylalanine       4.6         11           1
 G glycine             7.1         17           2
 H histidine           3.3          8           1
 I isoleucine          2.5          6           1
 K lysine              2.9          7           1
 L leucine            10.0         24           2
 M methionine          0.4          1           1
 N asparagine          1.2          3           1
 P proline            10.0         24           4
 Q glutamine           3.3          8           1
 R arginine           11.2         27           3
 S serine             11.2         27           2
 T threonine           3.7          9           1
 V valine              5.4         13           2
 W tryptophan          2.1          5           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and leucine-rich repeat protein 22 
MAPT                  0.029   microtubule-associated protein tau isoform 6 
HDGFL1                0.029   hepatoma derived growth factor-like 1 
LOC100288108          0.027   PREDICTED: hypothetical protein 
LOC100288108          0.027   PREDICTED: hypothetical protein XP_002342919 
SOX1                  0.025   SRY (sex determining region Y)-box 1 
LOC100292723          0.025   PREDICTED: hypothetical protein 
LOC100288963          0.025   PREDICTED: hypothetical protein XP_002342546 
BAT2                  0.025   HLA-B associated transcript-2 
LOC100292370          0.021   PREDICTED: hypothetical protein 
LOC100293375          0.021   PREDICTED: hypothetical protein 
COL4A3                0.021   alpha 3 type IV collagen isoform 5 precursor 
COL4A3                0.021   alpha 3 type IV collagen isoform 4 precursor 
COL4A3                0.021   alpha 3 type IV collagen isoform 2 precursor 
COL4A3                0.021   alpha 3 type IV collagen isoform 1 precursor 
COL1A1                0.021   alpha 1 type I collagen preproprotein 
NFKBIE                0.021   nuclear factor of kappa light polypeptide gene enhan...
LOC100293249          0.021   PREDICTED: similar to hCG2040393 
LOC100291245          0.021   PREDICTED: hypothetical protein XP_002347031 
LOC100287846          0.021   PREDICTED: hypothetical protein XP_002342883 
COL10A1               0.021   type X collagen alpha 1 precursor 
CASKIN1               0.021   CASK interacting protein 1 
COL3A1                0.021   collagen type III alpha 1 preproprotein 
OTUD7A                0.021   OTU domain containing 7A 
DTX1                  0.021   deltex homolog 1 
COL11A1               0.019   alpha 1 type XI collagen isoform B preproprotein [Ho...
COL11A1               0.019   alpha 1 type XI collagen isoform C preproprotein [Ho...
COL11A1               0.019   alpha 1 type XI collagen isoform A preproprotein [Ho...
WAS                   0.019   Wiskott-Aldrich syndrome protein 
COL5A2                0.019   alpha 2 type V collagen preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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