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Search of human proteins with 41282048
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41282048 pyrin and HIN domain family, member 1 alpha 2
isoform [Homo sapiens]
(483 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isofor... 958 0.0
gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isofor... 950 0.0
gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform... 878 0.0
gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform... 870 0.0
gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens] 596 e-170
gi|4505227 myeloid cell nuclear differentiation antigen [Homo sa... 393 e-109
gi|4757734 absent in melanoma 2 [Homo sapiens] 172 6e-43
gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens] 134 2e-31
gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens] 132 5e-31
gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo sap... 132 5e-31
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 43 6e-04
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 41 0.003
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 41 0.003
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 41 0.003
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 41 0.003
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 41 0.003
gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens] 40 0.006
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 38 0.018
gi|6912458 calcineurin binding protein 1 [Homo sapiens] 38 0.018
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ... 38 0.023
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 37 0.031
gi|22547219 Toll-interleukin 1 receptor domain-containing adapto... 37 0.040
gi|89111122 Toll-interleukin 1 receptor domain-containing adapto... 37 0.040
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 37 0.052
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 37 0.052
gi|71979937 sialophorin [Homo sapiens] 37 0.052
gi|4507181 sialophorin [Homo sapiens] 37 0.052
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 36 0.068
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens] 36 0.068
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens] 36 0.068
>gi|41282048 pyrin and HIN domain family, member 1 alpha 2 isoform
[Homo sapiens]
Length = 483
Score = 958 bits (2476), Expect = 0.0
Identities = 483/483 (100%), Positives = 483/483 (100%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT
Sbjct: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF
Sbjct: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK
Sbjct: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG
Sbjct: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST
Sbjct: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
Query: 421 TLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLSSDTSTNRHP 480
TLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLSSDTSTNRHP
Sbjct: 421 TLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLSSDTSTNRHP 480
Query: 481 AVP 483
AVP
Sbjct: 481 AVP 483
>gi|39540514 pyrin and HIN domain family, member 1 alpha 1 isoform
[Homo sapiens]
Length = 492
Score = 950 bits (2456), Expect = 0.0
Identities = 483/492 (98%), Positives = 483/492 (98%), Gaps = 9/492 (1%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKV---------KGIIPSKKTKQKEVYPATPACT 111
GLGKLIEFFKEIPTLGDLAETLKREKLKV KGIIPSKKTKQKEVYPATPACT
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120
Query: 112 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 171
PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ
Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180
Query: 172 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 231
TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH
Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240
Query: 232 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 291
ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV
Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300
Query: 292 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 351
PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE
Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360
Query: 352 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 411
CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ
Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420
Query: 412 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS 471
HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS
Sbjct: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAPPLS 480
Query: 472 SDTSTNRHPAVP 483
SDTSTNRHPAVP
Sbjct: 481 SDTSTNRHPAVP 492
>gi|41282051 pyrin and HIN domain family, member 1 beta 2 isoform
[Homo sapiens]
Length = 452
Score = 878 bits (2269), Expect = 0.0
Identities = 444/444 (100%), Positives = 444/444 (100%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT
Sbjct: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF
Sbjct: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK
Sbjct: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG
Sbjct: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST
Sbjct: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
Query: 421 TLPESHLKTPQMPPTTPSSSSFTK 444
TLPESHLKTPQMPPTTPSSSSFTK
Sbjct: 421 TLPESHLKTPQMPPTTPSSSSFTK 444
>gi|41282056 pyrin and HIN domain family, member 1 beta 1 isoform
[Homo sapiens]
Length = 461
Score = 870 bits (2249), Expect = 0.0
Identities = 444/453 (98%), Positives = 444/453 (98%), Gaps = 9/453 (1%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA
Sbjct: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKV---------KGIIPSKKTKQKEVYPATPACT 111
GLGKLIEFFKEIPTLGDLAETLKREKLKV KGIIPSKKTKQKEVYPATPACT
Sbjct: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVANKIESIPVKGIIPSKKTKQKEVYPATPACT 120
Query: 112 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 171
PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ
Sbjct: 121 PSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQ 180
Query: 172 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 231
TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH
Sbjct: 181 TSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFH 240
Query: 232 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 291
ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV
Sbjct: 241 ATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEV 300
Query: 292 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 351
PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE
Sbjct: 301 PKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGE 360
Query: 352 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 411
CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ
Sbjct: 361 CHNIPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQ 420
Query: 412 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 444
HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK
Sbjct: 421 HPKPSEASTTLPESHLKTPQMPPTTPSSSSFTK 453
>gi|112789562 interferon, gamma-inducible protein 16 [Homo sapiens]
Length = 729
Score = 596 bits (1536), Expect = e-170
Identities = 309/447 (69%), Positives = 362/447 (80%), Gaps = 1/447 (0%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M YK IVLLKGLEVINDYHFR+VKSLLSNDLKLN KM+EEYDKIQIADLMEEKF GDA
Sbjct: 1 MGKKYKNIVLLKGLEVINDYHFRMVKSLLSNDLKLNLKMREEYDKIQIADLMEEKFRGDA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
GLGKLI+ F++IPTL DLAETLK+EKLKVKG S+K K KEV +PA + S+ + +G
Sbjct: 61 GLGKLIKIFEDIPTLEDLAETLKKEKLKVKGPALSRKRK-KEVDATSPAPSTSSTVKTEG 119
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
AE T G QKRKK ++E+ G K SK+S+EQT+P AGA STAMGRSP P+TS SAPPN+
Sbjct: 120 AEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAPPNS 179
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
SSTE+ K +A T +N+ ++ P+I VL+ TK F+YE+ E E++ MFHATVATQTQF
Sbjct: 180 SSTENPKTVAKCQVTPRRNVLQKRPVIVKVLSTTKPFEYETPEMEKKIMFHATVATQTQF 239
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
FHVKVLN +LK KF K+IIIIS+Y + +SLLEVNE S+VSEAGP+QTFEVP II RAK
Sbjct: 240 FHVKVLNTSLKEKFNGKKIIIISDYLEYDSLLEVNEESTVSEAGPNQTFEVPNKIINRAK 299
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
+ KI+ILHKQ SG IVYG+FMLH K VN+KTTIYEIQD G M VVG G+CHNIPCE+G
Sbjct: 300 ETLKIDILHKQASGNIVYGVFMLHKKTVNQKTTIYEIQDDRGKMDVVGTGQCHNIPCEEG 359
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEAST 420
DKL+LFCFRLRK+ MSKL+SEMHSFIQI+K TN R++D +SM LPQEQ Q P PSEAST
Sbjct: 360 DKLQLFCFRLRKKNQMSKLISEMHSFIQIKKKTNPRNNDPKSMKLPQEQRQLPYPSEAST 419
Query: 421 TLPESHLKTPQMPPTTPSSSSFTKKDE 447
T PESHL+TPQMPPTTPSSS FTKK E
Sbjct: 420 TFPESHLRTPQMPPTTPSSSFFTKKSE 446
Score = 177 bits (449), Expect = 2e-44
Identities = 118/298 (39%), Positives = 154/298 (51%), Gaps = 21/298 (7%)
Query: 105 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 164
P P TPS+ K +E+T+ R ++ KE + S A
Sbjct: 429 PQMPPTTPSSSFFTKKSEDTISKMN---------DFMRMQILKEGSHFPGPFMTSIGPAE 479
Query: 165 GRSPPPQTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIA-----MVLNATKVFKY 219
PQ PP+T S+ L L R T + + ED + MVLNAT+ F Y
Sbjct: 480 SHPHTPQM----PPSTPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVY 535
Query: 220 ESSENEQRRMFHATVATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASS 279
E E Q++MFHATVAT+ + F VKV NI+LK KF K+II I+NY RN LEV +
Sbjct: 536 EPKE--QKKMFHATVATENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTL 593
Query: 280 VSEAGPDQTFEVPKDIIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQD 339
V++ D+ E+PK +IR A PKIN L QT G V G+F +H K V + T YEIQD
Sbjct: 594 VADVNADRNMEIPKGLIRSASVTPKINQLCSQTKGSFVNGVFEVHKKNVRGEFTYYEIQD 653
Query: 340 KTGSMAVVGKGECHNIPCEKGDKLRLFCFRLR-KRENMSKLMSEMHSFIQIQKNTNQR 396
TG M VV G I CE+GDKL+L CF L K N +L S +HS I++ K +
Sbjct: 654 NTGKMEVVVHGRLTTINCEEGDKLKLTCFELAPKSGNTGELRSVIHSHIKVIKTRKNK 711
Score = 30.4 bits (67), Expect = 3.7
Identities = 20/86 (23%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Query: 388 QIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDE 447
Q +K + + + + +EQ+Q P P+ A + +P+ + P +SS T+ +
Sbjct: 127 QKRKKSTKEKAGPKGSKVSEEQTQPPSPAGAGMSTAMGRSPSPKTSLSAPPNSSSTENPK 186
Query: 448 THPGAQSSP-ANFRITSPTVAPPLSS 472
T Q +P N P + LS+
Sbjct: 187 TVAKCQVTPRRNVLQKRPVIVKVLST 212
>gi|4505227 myeloid cell nuclear differentiation antigen [Homo
sapiens]
Length = 407
Score = 393 bits (1009), Expect = e-109
Identities = 212/397 (53%), Positives = 277/397 (69%), Gaps = 8/397 (2%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M N YKKI+LLKG E+++DYHF +KSLL+ DL L KM+EEY++I+I DLME+KF G A
Sbjct: 1 MVNEYKKILLLKGFELMDDYHFTSIKSLLAYDLGLTTKMQEEYNRIKITDLMEKKFQGVA 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGII------PSKKTKQKEVYPATPACTPSN 114
L KLIE K++P+L +L L++EK KV I P KK Q+EV A PA T N
Sbjct: 61 CLDKLIELAKDMPSLKNLVNNLRKEKSKVAKKIKTQEKAPVKKINQEEVGLAAPAPTARN 120
Query: 115 RLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
+LT++ QKRK P++E+T KR+K+S+EQ++P +GASTS A+ P PQTSS
Sbjct: 121 KLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTSS 180
Query: 175 SAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATV 234
S P NTS T + + A R A +N+ + DP+ +VL AT FKYES EN + MFHATV
Sbjct: 181 STPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKATAPFKYESPENGKSTMFHATV 240
Query: 235 ATQTQFFHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKD 294
A++TQ+FHVKV +INLK KF++K++I IS+YS+ ++E+ EASSVS+ +Q FEVP
Sbjct: 241 ASKTQYFHVKVFDINLKEKFVRKKVITISDYSECKGVMEIKEASSVSDF--NQNFEVPNR 298
Query: 295 IIRRAKKIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHN 354
II A K PKI+ L+KQ SG +VYGLFML K V++K TIYEIQD TGSM VVG G+ HN
Sbjct: 299 IIEIANKTPKISQLYKQASGTMVYGLFMLQKKSVHKKNTIYEIQDNTGSMDVVGSGKWHN 358
Query: 355 IPCEKGDKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 391
I CEKGDKLRLFC +LR + KL+ HSFI++ K
Sbjct: 359 IKCEKGDKLRLFCLQLRTVDRKLKLVCGSHSFIKVIK 395
Score = 48.9 bits (115), Expect = 1e-05
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 377 SKLMSEMHSFIQI---QKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMP 433
+KL SE I + +K N+ +++ + QEQS+ P PS AST+ H PQ
Sbjct: 120 NKLTSEARGRIPVAQKRKTPNKEKTEAKRNKVSQEQSKPPGPSGASTSAAVDHPPLPQTS 179
Query: 434 PTTPSSSSFTKKDETHPGAQ 453
+TPS++SFT ET Q
Sbjct: 180 SSTPSNTSFTPNQETQAQRQ 199
>gi|4757734 absent in melanoma 2 [Homo sapiens]
Length = 343
Score = 172 bits (436), Expect = 6e-43
Identities = 125/391 (31%), Positives = 189/391 (48%), Gaps = 53/391 (13%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK+I+LL GL+ I D K LS++ + ++IQ+A LM + +
Sbjct: 1 MESKYKEILLLTGLDNITDEELDRFKFFLSDEFNIATGKLHTANRIQVATLMIQNAGAVS 60
Query: 61 GLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKG 120
+ K I F+++ + L AK
Sbjct: 61 AVMKTIRIFQKLNYM----------------------------------------LLAKR 80
Query: 121 AEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNT 180
+E +K K + ++ TK +S+ + P+ SA A R+ P + P
Sbjct: 81 LQE----EKEKVDKQYKSVTKPKPLSQAEMSPAASAAIRNDVAKQRAAPKVSPHVKP--- 133
Query: 181 SSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQF 240
E + +A + + + F++ + MVL A K F +E+ E +Q MFHATVAT+ +F
Sbjct: 134 ---EQKQMVAQQESI--REGFQKRCLPVMVLKAKKPFTFETQEGKQE-MFHATVATEKEF 187
Query: 241 FHVKVLNINLKRKFIKKRIIIISNYSKRNSLLEVNEASSVSEAGPDQTFEVPKDIIRRAK 300
F VKV N LK KFI KRIIII+ Y + + LEVN AS V +A DQ VP +IIR+A
Sbjct: 188 FFVKVFNTLLKDKFIPKRIIIIARYYRHSGFLEVNSASRVLDAESDQKVNVPLNIIRKAG 247
Query: 301 KIPKINILHKQTSGYIVYGLFMLHTKIVNRKTTIYEIQDKTGSMAVVGKGECHNIPCEKG 360
+ PKIN L Q G IV GLF++ +K ++++ D TG M V+G + C++G
Sbjct: 248 ETPKINTLQTQPLGTIVNGLFVVQKVTEKKKNILFDLSDNTGKMEVLGVRNEDTMKCKEG 307
Query: 361 DKLRLFCFRLRKRENMSKLMSEMHSFIQIQK 391
DK+RL F L K +L S +HS I++ K
Sbjct: 308 DKVRLTFFTLSKNGEKLQLTSGVHSTIKVIK 338
>gi|169161845 PREDICTED: similar to hCG2041495 [Homo sapiens]
Length = 196
Score = 134 bits (337), Expect = 2e-31
Identities = 79/156 (50%), Positives = 92/156 (58%), Gaps = 23/156 (14%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97
GLGKL + T GDLAETL++ K + KG SKK
Sbjct: 101 GLGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 98 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133
KQ++V P TP T + TA+G EET Q+ P
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|169162310 PREDICTED: similar to hCG2041495 [Homo sapiens]
Length = 196
Score = 132 bits (333), Expect = 5e-31
Identities = 78/156 (50%), Positives = 91/156 (58%), Gaps = 23/156 (14%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97
G GKL + T GDLAETL++ K + KG SKK
Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 98 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133
KQ++V P TP T + TA+G EET Q+ P
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|169162679 PREDICTED: hypothetical protein LOC646377 [Homo
sapiens]
Length = 196
Score = 132 bits (333), Expect = 5e-31
Identities = 78/156 (50%), Positives = 91/156 (58%), Gaps = 23/156 (14%)
Query: 1 MANNYKKIVLLKGLEVINDYHFRIVKSLLSNDLKLNPKMKEEYDKIQIADLMEEKFPGDA 60
M + YK VLLKGLE INDYHF I+ SLL NDLKLN ++EYDKIQIADLMEEKFPGDA
Sbjct: 41 MVSKYKNNVLLKGLEAINDYHFSIINSLLINDLKLNSTRRDEYDKIQIADLMEEKFPGDA 100
Query: 61 GLGKLIEFFKEIPT-LGDLAETLKREK----------------------LKVKGIIPSKK 97
G GKL + T GDLAETL++ K + KG SKK
Sbjct: 101 GFGKLRTLQRNTNTGRGDLAETLRKVKRSSALGLDVLLFSLLVVNKIKSIPAKGKTSSKK 160
Query: 98 TKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKP 133
KQ++V P TP T + TA+G EET Q+ P
Sbjct: 161 RKQRKVGPTTPLATTDKKFTAEGGEETPIAQRFHTP 196
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 43.1 bits (100), Expect = 6e-04
Identities = 26/73 (35%), Positives = 32/73 (43%)
Query: 125 LGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTE 184
L P++ P+ + T K P CSA A+ ST SPPP PP
Sbjct: 1218 LQPEEADVPAYPKVATVPQSEKKPSKYPLCSADAAVSTTPPGSPPPPPPLPEPPVLKVLS 1277
Query: 185 SLKPLANRHATAS 197
SLKP A ATA+
Sbjct: 1278 SLKPAAPSPATAA 1290
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 473 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 532
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 533 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 586
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 738 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 797
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 798 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 851
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 473 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 532
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 533 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 586
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 83 KREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETG-TK 141
K+ G++P+ K+ V A P+ PS + K + P+KR PS+ +
Sbjct: 738 KKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRASPSKPASAPAS 797
Query: 142 RSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATA 196
RS QT + A+ ++ S P T P TE KP + TA
Sbjct: 798 RSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEG-KPAEVKKMTA 851
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 40.8 bits (94), Expect = 0.003
Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 361 DKLRLFCFRLR-KRENMSKLMSEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPS--- 416
DK++ R+ +++ SKL + + K T R H + S +L E+ PS
Sbjct: 1768 DKVKALQKRVEDEQKGRSKLPIRVKGKEDVPKKTTHRPHPAASPSLKSERHAPGSPSPKT 1827
Query: 417 EASTTLPESHLKTPQMPPTTPSSS-------SFTKKDETHPGAQSSPANFRITSPTVAPP 469
E +TL S KT + PP +PSS S + K E H A SS + + P
Sbjct: 1828 ERHSTLSSS-AKTERHPPVSPSSKTEKHSPVSPSAKTERHSPASSSSKTEKHS------P 1880
Query: 470 LSSDTSTNRHPAV 482
+S T T RH V
Sbjct: 1881 VSPSTKTERHSPV 1893
Score = 29.3 bits (64), Expect = 8.3
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 15/109 (13%)
Query: 381 SEMHSFIQIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSS 440
+E HS + T + S S S + P ++ P S KT + PP +PS
Sbjct: 1851 TEKHSPVSPSAKTERHSPASSSSKTEKHSPVSPS-TKTERHSPVSSTKTERHPPVSPSG- 1908
Query: 441 SFTKKDETHPGAQSSPANFRITSPTVAP-------PLSSDTSTNRHPAV 482
K D+ P SP+ P V+P P+S T++H V
Sbjct: 1909 ---KTDKRPP---VSPSGRTEKHPPVSPGRTEKRLPVSPSGRTDKHQPV 1951
>gi|50409756 SRp25 nuclear protein isoform 1 [Homo sapiens]
Length = 360
Score = 39.7 bits (91), Expect = 0.006
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 118 AKGAEETLGPQKRKKPSEEETG---TKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
A+GA +G +KR + G KR K S++ T +CSA ST+ GR +
Sbjct: 120 ARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSA----STSQGRKASTAPGA 175
Query: 175 SAPPNTSSTESLKPLANRHATASKN 199
A P+ TE K A R +S +
Sbjct: 176 EASPSPCITERSKQKARRRTRSSSS 200
Score = 32.3 bits (72), Expect = 0.99
Identities = 26/102 (25%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 75 LGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPS 134
+G + R + + +G S+K K+K + C+ S T++G + + P PS
Sbjct: 127 VGSRKRSRSRSRSRGRG---SEKRKKKSRKDTSRNCSAS---TSQGRKASTAPGAEASPS 180
Query: 135 EEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSSA 176
T + K ++ +TR S S+ +S+S++ S +SSS+
Sbjct: 181 PCITERSKQK-ARRRTRSSSSSSSSSSSSSSSSSSSSSSSSS 221
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 38.1 bits (87), Expect = 0.018
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 410 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+Q P P+ STT + TP Q P TTP +++ T P +P IT+ T
Sbjct: 1538 TQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTVLITTTTT 1597
Query: 467 APPLSSDTSTNRHPAVP 483
P + TST P
Sbjct: 1598 MTPTPTPTSTKSTTVTP 1614
Score = 35.0 bits (79), Expect = 0.15
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Query: 410 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+Q P P+ +TT + TP Q P TTP +++ T P +P IT+ T
Sbjct: 1446 TQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTPTAITTTTT 1505
Query: 467 APPLSSDTSTNRHPAVP 483
P + T T + P
Sbjct: 1506 VTPTPTPTGTQTPTSTP 1522
Score = 34.7 bits (78), Expect = 0.20
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Query: 409 QSQHPKPSEASTTLPESHLKT-PQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVA 467
QS P P +TT+ + T Q P TTP +++ T P +P IT+ T
Sbjct: 1332 QSTTPTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTV 1391
Query: 468 PPLSSDTSTNRHPAVP 483
P + T T + P
Sbjct: 1392 TPTPTPTGTQTPTSTP 1407
Score = 32.7 bits (73), Expect = 0.75
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 410 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+Q P + +TT + TP Q P TTP +++ T P +P + IT+ T
Sbjct: 1354 TQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTSTPITTTTT 1413
Query: 467 APPLSSDTSTNRHPAVP 483
P + T T P
Sbjct: 1414 VTPTPTPTGTQTPTTTP 1430
Score = 31.6 bits (70), Expect = 1.7
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Query: 410 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+Q P P+ +TT + TP Q P +TP +++ T P +P I++ T
Sbjct: 1492 TQTPTPTAITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTT 1551
Query: 467 APPLSSDTSTNRHPAVP 483
P + T T P
Sbjct: 1552 VTPTPTPTGTQTPTTTP 1568
Score = 30.4 bits (67), Expect = 3.7
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Query: 410 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+Q P + +TT + TP Q P TTP +++ T P +P IT+ +
Sbjct: 1400 TQTPTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAPTPTAITTTST 1459
Query: 467 APPLSSDTSTNRHPAVP 483
P + T T P
Sbjct: 1460 VTPTPTPTGTQTPTTTP 1476
Score = 30.0 bits (66), Expect = 4.9
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 410 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+Q P + +TT + TP Q P TP S++ T P +P IT+ T
Sbjct: 1515 TQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTTT 1574
Query: 467 APPLSSDTST 476
P + T T
Sbjct: 1575 VTPTPTPTGT 1584
Score = 29.6 bits (65), Expect = 6.4
Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 410 SQHPKPSEASTTLPESHLKTP---QMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+Q P + +TT + TP Q P +TP +++ T P +P IT+ T
Sbjct: 1377 TQTPTTTPITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTT 1436
Query: 467 APPLSSDTST 476
P + T T
Sbjct: 1437 VTPTPTPTGT 1446
>gi|6912458 calcineurin binding protein 1 [Homo sapiens]
Length = 2220
Score = 38.1 bits (87), Expect = 0.018
Identities = 24/87 (27%), Positives = 33/87 (37%), Gaps = 1/87 (1%)
Query: 105 PATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAM 164
PA P C P+ GAE T + + +P G + S+ Q S AS+
Sbjct: 2046 PAEPHCWPAEAALGTGAEPTCSQEGKLRPEPRRDGEAQEAASETQPLSSPPTAASSKAPS 2105
Query: 165 GRSPPPQTSSSAPPNTSSTESLKPLAN 191
S P P S +S +PL N
Sbjct: 2106 SGSAQPPEGHPGKPEPSRAKS-RPLPN 2131
>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
homolog 2 [Homo sapiens]
Length = 1210
Score = 37.7 bits (86), Expect = 0.023
Identities = 39/169 (23%), Positives = 69/169 (40%), Gaps = 15/169 (8%)
Query: 64 KLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNR------LT 117
K I KEI + + + +E K K PS ++ +KE+ P P + S +
Sbjct: 825 KKIRLEKEIKSQSSSSSSSHKESSKTKPSRPSSQSSKKEMLPPPPVSSSSQKPAKPALKR 884
Query: 118 AKGAEETLGPQKRKKPSEEETGTKRSKMSKEQ------TRPSCS-AGASTSTAMGRSPPP 170
++ +T G K S ++ K S + K++ +R S G+S TA P
Sbjct: 885 SRREADTCGQDPPKSASSTKSNHKDSSIPKQRRVEGKGSRSSSEHKGSSGDTANPFPVPS 944
Query: 171 QTSSSAPPNTSSTESLKPLANRHATASKNIFREDPIIAMVLNATKVFKY 219
+ ++ P + K A+ H +K + ++ + M K FKY
Sbjct: 945 LPNGNSKPGKPQVKFDKQQADLHMREAKKMKQKAEL--MTDRVGKAFKY 991
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 37.4 bits (85), Expect = 0.031
Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 5/97 (5%)
Query: 387 IQIQKNTNQRSHDSRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKD 446
++ Q+ N R + L + + + P E +LP L+ P P TPSS +D
Sbjct: 305 VEEQQEGNDAEAQRREIELLRREGELPL-EELLRSLPPQLLEGPSSPSQTPSSHDSDTRD 363
Query: 447 ETHPGAQSSPANFRITSPTVAPPLSSDTSTNRHPAVP 483
GA+ P + PP S+ T N+ P P
Sbjct: 364 GPEEGAEEEPPQVL----EIKPPPSAVTQRNKQPWHP 396
>gi|22547219 Toll-interleukin 1 receptor domain-containing adaptor
protein isoform b [Homo sapiens]
Length = 235
Score = 37.0 bits (84), Expect = 0.040
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 402 SMALPQEQSQHPKP-SEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFR 460
S +LP S+ KP + + ++ LK P+ P +P S+S T + P+
Sbjct: 4 STSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTSSDASQPTSQDSPLPPSLSS 63
Query: 461 ITSPTVAPPLSSDTSTNR 478
+TSP++ P +SD+ ++R
Sbjct: 64 VTSPSLPPTHASDSGSSR 81
>gi|89111122 Toll-interleukin 1 receptor domain-containing adaptor
protein isoform a [Homo sapiens]
Length = 221
Score = 37.0 bits (84), Expect = 0.040
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 402 SMALPQEQSQHPKP-SEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFR 460
S +LP S+ KP + + ++ LK P+ P +P S+S T + P+
Sbjct: 4 STSLPAPGSRPKKPLGKMADWFRQTLLKKPKKRPNSPESTSSDASQPTSQDSPLPPSLSS 63
Query: 461 ITSPTVAPPLSSDTSTNR 478
+TSP++ P +SD+ ++R
Sbjct: 64 VTSPSLPPTHASDSGSSR 81
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 36.6 bits (83), Expect = 0.052
Identities = 48/205 (23%), Positives = 80/205 (39%), Gaps = 37/205 (18%)
Query: 111 TPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPP 170
TPS + E T + P+E R+ ++ E+T PS + +
Sbjct: 596 TPSPAEPTENRERTANEKTTPSPAEPTENGDRTPLANEKTTPSLAEPTENGQRTPFANEK 655
Query: 171 QTSSSAPP----------NTSSTES-LKPLANRHATASKNIFRE--DPIIAMVLNA---T 214
TSSSA P N ++T S +P NR TA++N P + A T
Sbjct: 656 TTSSSAEPTEHEERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENREMTANEKT 715
Query: 215 KVFKYESSENEQRRMFHATVAT---------QTQFFHVKVLNINLKRKFIKKRIIIISNY 265
+F E +EN +R T ++ +T F + K + + + + +
Sbjct: 716 TLFPAEPTENRERTANEKTTSSPAEPTENGQRTPFANEKTTSSSAEP----------TEH 765
Query: 266 SKRNSLLEVNEASSVSEAGPDQTFE 290
+R L NE +++S AGP + E
Sbjct: 766 GERTPL--ANENTTLSPAGPTENRE 788
Score = 33.5 bits (75), Expect = 0.44
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
Query: 94 PSKKTKQKEVYPATPACTPSNRLTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPS 153
P+ T+ +E A TP + E T P++ R+ ++ E+T PS
Sbjct: 780 PAGPTENRE-RTANEKTTPFPAEPTENRERTANENTTPSPAQPTENGDRTPLANEKTTPS 838
Query: 154 CSAGASTSTAMGRSPPPQTSSSAPPNTSSTESLKPLANRHATAS 197
+ + TSSSA P + + PLAN + T+S
Sbjct: 839 LAEPTENGKRTPFANEKTTSSSAEPTEHAERT--PLANENTTSS 880
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 36.6 bits (83), Expect = 0.052
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Query: 56 FPGDAGLGKLIEFFKEIPTLGDLAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPSNR 115
FPG+A K++E +++ L L + +K G +P+ K A S +
Sbjct: 267 FPGNAPQNKILEGLEKLRHLDFLRYPVATQKDLASGAVPTNLKPSKIKQRAD--SKESLK 324
Query: 116 LTAKGAEETLGPQKRKKPSEEETGTKRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSSS 175
T K A L KR++ EE RS+++KE + A S+ PP + +
Sbjct: 325 ATTKTAVSKLA--KREEVVEEGAKEARSELAKELAKTEKKAKESS-----EKPPEKPAKP 377
Query: 176 APPNTSSTESLK 187
T S+E+LK
Sbjct: 378 ERVKTESSEALK 389
>gi|71979937 sialophorin [Homo sapiens]
Length = 400
Score = 36.6 bits (83), Expect = 0.052
Identities = 48/230 (20%), Positives = 82/230 (35%), Gaps = 24/230 (10%)
Query: 78 LAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPS--NRLTAKGAEETLGPQKRKKPSE 135
L E +++ +K ++T +PA P S + G T P+ + S
Sbjct: 89 LPEPTTYQEVSIKMSSVPQETPHATSHPAVPITANSLGSHTVTGGTITTNSPETSSRTSG 148
Query: 136 EETGTKRSKMSKEQTR---PSCSAGASTSTAMGRSPPP----------QTSSSAPPNTSS 182
T S + + P A S T+ G S PP T ++ PP T +
Sbjct: 149 APVTTAASSLETSRGTSGPPLTMATVSLETSKGTSGPPVTMATDSLETSTGTTGPPVTMT 208
Query: 183 TESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQFFH 242
T SL+P + ++ + + + + R M V
Sbjct: 209 TGSLEPSSGASGPQVSSVKLSTMMSPTTSTNASTVPFRNPDENSRGMLPVAVLVALLAVI 268
Query: 243 VKVLNINLKRKFIKKR--IIIISNYSKRNSLLEVNEASSVSEAGPDQTFE 290
V V + L R+ K+R +++S KRN +++ + AGP Q E
Sbjct: 269 VLVALLLLWRRRQKRRTGALVLSRGGKRNGVVD-------AWAGPAQVPE 311
>gi|4507181 sialophorin [Homo sapiens]
Length = 400
Score = 36.6 bits (83), Expect = 0.052
Identities = 48/230 (20%), Positives = 82/230 (35%), Gaps = 24/230 (10%)
Query: 78 LAETLKREKLKVKGIIPSKKTKQKEVYPATPACTPS--NRLTAKGAEETLGPQKRKKPSE 135
L E +++ +K ++T +PA P S + G T P+ + S
Sbjct: 89 LPEPTTYQEVSIKMSSVPQETPHATSHPAVPITANSLGSHTVTGGTITTNSPETSSRTSG 148
Query: 136 EETGTKRSKMSKEQTR---PSCSAGASTSTAMGRSPPP----------QTSSSAPPNTSS 182
T S + + P A S T+ G S PP T ++ PP T +
Sbjct: 149 APVTTAASSLETSRGTSGPPLTMATVSLETSKGTSGPPVTMATDSLETSTGTTGPPVTMT 208
Query: 183 TESLKPLANRHATASKNIFREDPIIAMVLNATKVFKYESSENEQRRMFHATVATQTQFFH 242
T SL+P + ++ + + + + R M V
Sbjct: 209 TGSLEPSSGASGPQVSSVKLSTMMSPTTSTNASTVPFRNPDENSRGMLPVAVLVALLAVI 268
Query: 243 VKVLNINLKRKFIKKR--IIIISNYSKRNSLLEVNEASSVSEAGPDQTFE 290
V V + L R+ K+R +++S KRN +++ + AGP Q E
Sbjct: 269 VLVALLLLWRRRQKRRTGALVLSRGGKRNGVVD-------AWAGPAQVPE 311
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 36.2 bits (82), Expect = 0.068
Identities = 19/72 (26%), Positives = 30/72 (41%)
Query: 409 QSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTVAP 468
+S P A++ PE H T P TP +S + T+ + +P T+P + P
Sbjct: 1111 KSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQP 1170
Query: 469 PLSSDTSTNRHP 480
S+D P
Sbjct: 1171 STSTDQPVTSEP 1182
Score = 32.7 bits (73), Expect = 0.75
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 400 SRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANF 459
SR+ S P T PE + T P TP +S T + T+ SS N
Sbjct: 1307 SRTTRSRTNMSSVKTPETVVPTAPELQISTSTDQPVTPKPTSRTTRSRTN---MSSVKNP 1363
Query: 460 RITSPTVAPPLSSDTSTNRHPAVP 483
T P +AP L TST + P P
Sbjct: 1364 ESTVP-IAPELPPSTSTEQ-PVTP 1385
Score = 30.0 bits (66), Expect = 4.9
Identities = 19/81 (23%), Positives = 31/81 (38%)
Query: 400 SRSMALPQEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANF 459
SR+ + +S P T P+ T P TP +S + T+ + +P
Sbjct: 1389 SRATRGRKNRSSGKTPETLVPTAPKLEPSTSTDQPVTPEPTSQATRGRTNRSSVKTPETV 1448
Query: 460 RITSPTVAPPLSSDTSTNRHP 480
T+P + P S+D P
Sbjct: 1449 VPTAPELQPSTSTDQPVTPEP 1469
Score = 29.3 bits (64), Expect = 8.3
Identities = 22/77 (28%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 407 QEQSQHPKPSEASTTLPESHLKTPQMPPTTPSSSSFTKKDETHPGAQSSPANFRITSPTV 466
+ +S P T PE T P TP +S T + T+ + +P T
Sbjct: 1273 KNRSSVKTPEPVVPTAPELRPSTSTDRPVTPKPTSRTTRSRTNMSSVKTPE----TVVPT 1328
Query: 467 APPLSSDTSTNRHPAVP 483
AP L TST++ P P
Sbjct: 1329 APELQISTSTDQ-PVTP 1344
>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
Length = 338
Score = 36.2 bits (82), Expect = 0.068
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 118 AKGAEETLGPQKRKKPSEEETGT---KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
A+GA +G +KR + G KR K S++ T +CSA S + ++ SS
Sbjct: 120 ARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSS 179
Query: 175 SAPPNTSSTESLKPLANRHATAS 197
S+ ++SS+ S ++ +++S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSS 202
>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
Length = 341
Score = 36.2 bits (82), Expect = 0.068
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 118 AKGAEETLGPQKRKKPSEEETGT---KRSKMSKEQTRPSCSAGASTSTAMGRSPPPQTSS 174
A+GA +G +KR + G KR K S++ T +CSA S + ++ SS
Sbjct: 120 ARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKARRRTRSS 179
Query: 175 SAPPNTSSTESLKPLANRHATAS 197
S+ ++SS+ S ++ +++S
Sbjct: 180 SSSSSSSSSSSSSSSSSSSSSSS 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.127 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,763,918
Number of Sequences: 37866
Number of extensions: 904192
Number of successful extensions: 7900
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 254
Number of HSP's that attempted gapping in prelim test: 6370
Number of HSP's gapped (non-prelim): 1695
length of query: 483
length of database: 18,247,518
effective HSP length: 106
effective length of query: 377
effective length of database: 14,233,722
effective search space: 5366113194
effective search space used: 5366113194
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.