Guide to the Human Genome
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Name: TIRAP Sequence: fasta or formatted (235aa) NCBI GI: 22547219
Description:

Toll-interleukin 1 receptor domain-containing adaptor protein isoform b

Referenced in:

Toll-like Receptors

Other entries for this name:
alt prot [221aa] Toll-interleukin 1 receptor domain-containing adaptor protein iso...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         18           2
 C cysteine            3.4          8           1
 D aspartate           6.0         14           1
 E glutamate           5.1         12           2
 F phenylalanine       2.1          5           1
 G glycine             6.8         16           2
 H histidine           1.3          3           1
 I isoleucine          1.3          3           1
 K lysine              4.7         11           2
 L leucine            11.9         28           2
 M methionine          2.1          5           1
 N asparagine          0.4          1           1
 P proline             9.4         22           2
 Q glutamine           4.7         11           1
 R arginine            5.5         13           1
 S serine             14.0         33           3
 T threonine           5.1         12           1
 V valine              4.7         11           1
 W tryptophan          1.3          3           1
 Y tyrosine            2.6          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Toll-interleukin 1 receptor domain-containing adapto... 
TIRAP                 0.916   Toll-interleukin 1 receptor domain-containing adapto...
MYD88                 0.059   myeloid differentiation primary response gene 88 [H...
TLR2                  0.053   toll-like receptor 2 
TLR6                  0.040   toll-like receptor 6 
TICAM1                0.031   toll-like receptor adaptor molecule 1 
TLR1                  0.026   toll-like receptor 1 
TLR10                 0.026   toll-like receptor 10 precursor 
TLR10                 0.026   toll-like receptor 10 precursor 
PYHIN1                0.026   pyrin and HIN domain family, member 1 alpha 2 isofor...
PYHIN1                0.026   pyrin and HIN domain family, member 1 alpha 1 isofor...
TLR5                  0.026   toll-like receptor 5 
ANKS6                 0.024   ankyrin repeat and sterile alpha motif domain contai...
PHIP                  0.024   pleckstrin homology domain interacting protein [Homo...
INPPL1                0.020   inositol polyphosphate phosphatase-like 1 
UBE4B                 0.020   ubiquitination factor E4B isoform 1 
MUC2                  0.018   mucin 2 precursor 
POLR2A                0.018   DNA-directed RNA polymerase II A 
SHANK2                0.018   SH3 and multiple ankyrin repeat domains 2 isoform 1...
ZFHX4                 0.018   zinc finger homeodomain 4 
IL18R1                0.018   interleukin 18 receptor 1 precursor 
LOC645529             0.018   PREDICTED: similar to Putative acrosin-like proteas...
ACR                   0.018   acrosin precursor 
KIAA1671              0.018   hypothetical protein LOC85379 
TICAM2                0.018   toll-like receptor adaptor molecule 2 
MAP3K10               0.018   mitogen-activated protein kinase kinase kinase 10 [H...
GP1BA                 0.015   platelet glycoprotein Ib alpha polypeptide precurso...
FREM2                 0.015   FRAS1-related extracellular matrix protein 2 precurs...
LOC100130506          0.015   PREDICTED: hypothetical protein 
LOC100288911          0.015   PREDICTED: hypothetical protein XP_002342241 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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