Guide to the Human Genome
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Name: GPRC5C Sequence: fasta or formatted (486aa) NCBI GI: 40217831
Description:

G protein-coupled receptor family C, group 5, member C isoform a

Referenced in:

G-Protein-coupled Receptors
Additional Genes in Development

Other entries for this name:
alt prot [453aa] G protein-coupled receptor family C, group 5, member C isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         49           2
 C cysteine            2.1         10           1
 D aspartate           2.5         12           2
 E glutamate           3.1         15           1
 F phenylalanine       4.9         24           2
 G glycine             8.8         43           2
 H histidine           1.6          8           1
 I isoleucine          4.1         20           2
 K lysine              3.7         18           2
 L leucine            10.3         50           4
 M methionine          2.9         14           1
 N asparagine          3.3         16           1
 P proline             6.6         32           2
 Q glutamine           5.1         25           4
 R arginine            4.1         20           2
 S serine              6.8         33           2
 T threonine           5.6         27           2
 V valine              8.4         41           2
 W tryptophan          2.5         12           1
 Y tyrosine            3.5         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor family C, group 5, member... 
GPRC5C                0.928   G protein-coupled receptor family C, group 5, member...
GPRC5B                0.258   G protein-coupled receptor, family C, group 5, member...
GPRC5A                0.189   G protein-coupled receptor, family C, group 5, member...
GPRC5D                0.179   G protein-coupled receptor, family C, group 5, member...
GRM2                  0.025   glutamate receptor, metabotropic 2 isoform a precurs...
GRM3                  0.023   glutamate receptor, metabotropic 3 precursor 
GRM1                  0.019   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM1                  0.018   glutamate receptor, metabotropic 1 isoform beta pre...
TAS1R2                0.014   taste receptor, type 1, member 2 
GRM2                  0.014   glutamate receptor, metabotropic 2 isoform b 
GPRC6A                0.013   G protein-coupled receptor, family C, group 6, memb...
CASR                  0.012   calcium-sensing receptor 
GRM6                  0.012   glutamate receptor, metabotropic 6 precursor 
FAM22F                0.010   hypothetical protein LOC54754 
GRM4                  0.010   glutamate receptor, metabotropic 4 
C9orf7                0.009   hypothetical protein LOC11094 isoform b 
LOC100130705          0.009   PREDICTED: hypothetical protein 
LOC100130705          0.009   PREDICTED: hypothetical protein 
LOC100130705          0.009   PREDICTED: hypothetical protein 
LOC100130705          0.009   PREDICTED: hypothetical protein 
BSN                   0.008   bassoon protein 
LOC100294103          0.007   PREDICTED: hypothetical protein 
LOC440017             0.006   PREDICTED: similar to double homeobox, 4 
LOC728022             0.006   PREDICTED: similar to double homeobox, 4 
LOC440014             0.006   PREDICTED: similar to double homeobox, 4 
LOC399839             0.006   PREDICTED: similar to double homeobox, 4 
LOC440013             0.006   PREDICTED: similar to double homeobox, 4 
LOC653548             0.006   PREDICTED: double homeobox, 4-like 
LOC441056             0.006   PREDICTED: double homeobox, 4-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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