LOC399839 17918

Name: LOC399839	Sequence: fasta or formatted (483aa)		NCBI GI: 239744242
Description: PREDICTED: similar to double homeobox, 4		Referenced in: Homeobox and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 16.8 81 2 C cysteine 1.2 6 1 D aspartate 1.9 9 1 E glutamate 6.6 32 3 F phenylalanine 1.9 9 1 G glycine 10.4 50 3 H histidine 1.9 9 1 I isoleucine 1.9 9 1 K lysine 1.0 5 1 L leucine 8.9 43 3 M methionine 0.6 3 1 N asparagine 0.6 3 1 P proline 14.9 72 3 Q glutamine 7.2 35 2 R arginine 9.3 45 4 S serine 6.0 29 1 T threonine 2.7 13 1 V valine 2.7 13 1 W tryptophan 2.9 14 2 Y tyrosine 0.6 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to double homeobox, 4 LOC440017 1.000 PREDICTED: similar to double homeobox, 4 LOC728022 1.000 PREDICTED: similar to double homeobox, 4 LOC440013 1.000 PREDICTED: similar to double homeobox, 4 LOC100289581 0.999 PREDICTED: hypothetical protein XP_002343082 LOC440014 0.998 PREDICTED: similar to double homeobox, 4 LOC441056 0.993 PREDICTED: double homeobox, 4-like LOC653548 0.990 PREDICTED: double homeobox, 4-like DUX4 0.990 double homeobox, 4 LOC728410 0.990 double homeobox, 4-like LOC653543 0.990 double homeobox, 4-like LOC653545 0.990 double homeobox, 4-like LOC653544 0.990 double homeobox, 4-like HPX-2 0.723 PREDICTED: similar to double homeobox, 4 LOC652119 0.692 PREDICTED: similar to putative DUX4 protein LOC652119 0.689 PREDICTED: similar to putative DUX4 protein HPX-2 0.682 PREDICTED: similar to double homeobox, 4 LOC100290397 0.509 PREDICTED: hypothetical protein XP_002348309, parti... LOC100288801 0.415 PREDICTED: hypothetical protein XP_002342402 LOC652586 0.375 PREDICTED: similar to facioscapulohumeral muscular ... LOC100290743 0.360 PREDICTED: hypothetical protein XP_002346688 LOC100134409 0.354 PREDICTED: similar to facioscapulohumeral muscular ... DUX3 0.302 double homeobox, 3 DUX5 0.300 double homeobox, 5 DUX1 0.257 double homeobox, 1 LOC100292644 0.161 PREDICTED: similar to facioscapulohumeral muscular ... DUXA 0.092 double homeobox A LOC100291517 0.084 PREDICTED: hypothetical protein XP_002347726 LOC100289629 0.084 PREDICTED: hypothetical protein XP_002344158 RAX 0.052 retina and anterior neural fold homeobox Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.