Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: GPRC6A Sequence: fasta or formatted (926aa) NCBI GI: 112807234
Description:

G protein-coupled receptor, family C, group 6, member A

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         60           2
 C cysteine            3.7         34           2
 D aspartate           3.6         33           3
 E glutamate           4.4         41           2
 F phenylalanine       6.6         61           2
 G glycine             4.2         39           2
 H histidine           2.5         23           1
 I isoleucine          9.9         92           3
 K lysine              5.6         52           2
 L leucine             9.4         87           3
 M methionine          2.8         26           1
 N asparagine          5.3         49           2
 P proline             3.6         33           1
 Q glutamine           3.8         35           1
 R arginine            3.2         30           2
 S serine              7.7         71           3
 T threonine           6.6         61           2
 V valine              6.0         56           2
 W tryptophan          1.4         13           1
 Y tyrosine            3.2         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor, family C, group 6, memb... 
CASR                  0.257   calcium-sensing receptor 
TAS1R3                0.198   taste receptor, type 1, member 3 
TAS1R1                0.184   sweet taste receptor T1r isoform b 
TAS1R2                0.181   taste receptor, type 1, member 2 
GRM3                  0.149   glutamate receptor, metabotropic 3 precursor 
GRM2                  0.140   glutamate receptor, metabotropic 2 isoform a precurs...
GRM5                  0.138   glutamate receptor, metabotropic 5 isoform b precurso...
GRM5                  0.134   glutamate receptor, metabotropic 5 isoform a precur...
GRM1                  0.124   glutamate receptor, metabotropic 1 isoform alpha pr...
GRM1                  0.124   glutamate receptor, metabotropic 1 isoform beta pre...
GRM8                  0.121   glutamate receptor, metabotropic 8 isoform b precur...
GRM8                  0.121   glutamate receptor, metabotropic 8 isoform a precur...
GRM6                  0.118   glutamate receptor, metabotropic 6 precursor 
GRM4                  0.116   glutamate receptor, metabotropic 4 
GRM7                  0.111   glutamate receptor, metabotropic 7 isoform b precurs...
GRM7                  0.111   glutamate receptor, metabotropic 7 isoform a precurso...
TAS1R1                0.092   sweet taste receptor T1r isoform c 
TAS1R1                0.084   sweet taste receptor T1r isoform a 
GRM2                  0.036   glutamate receptor, metabotropic 2 isoform b 
TAS1R1                0.022   sweet taste receptor T1r isoform d 
GABBR2                0.015   G protein-coupled receptor 51 
GPRC5D                0.011   G protein-coupled receptor, family C, group 5, member...
GABBR1                0.011   gamma-aminobutyric acid (GABA) B receptor 1 isoform...
GABBR1                0.011   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GABBR1                0.011   gamma-aminobutyric acid (GABA) B receptor 1 isoform ...
GRIN1                 0.010   NMDA receptor 1 isoform NR1-1 precursor 
GRIN1                 0.010   NMDA receptor 1 isoform NR1-3 precursor 
GRIN1                 0.010   NMDA receptor 1 isoform NR1-2 precursor 
GPRC5B                0.008   G protein-coupled receptor, family C, group 5, member...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press