Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 39753961
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|39753961 IQ motif containing GTPase activating protein 3
[Homo sapiens]
(1631 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|39753961 IQ motif containing GTPase activating protein 3 [Hom... 3200 0.0
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo... 1916 0.0
gi|116089337 IQ motif containing GTPase activating protein 2 [Ho... 1232 0.0
gi|4557793 neurofibromin isoform 2 [Homo sapiens] 68 8e-11
gi|109826564 neurofibromin isoform 1 [Homo sapiens] 59 3e-08
gi|126116596 asp (abnormal spindle)-like, microcephaly associate... 55 7e-07
gi|51093832 GTPase activating protein and VPS9 domains 1 [Homo s... 51 8e-06
gi|153945715 myosin VC [Homo sapiens] 48 7e-05
gi|4759026 RAS protein activator like 1 [Homo sapiens] 46 3e-04
gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens] 45 8e-04
gi|12545406 RAS p21 protein activator 1 isoform 2 [Homo sapiens] 45 8e-04
gi|222831628 IQ motif containing F5 [Homo sapiens] 42 0.005
gi|38201692 RAS p21 protein activator 3 [Homo sapiens] 41 0.008
gi|41281683 disabled homolog 2 interacting protein isoform 2 [Ho... 40 0.024
gi|94967023 disabled homolog 2 interacting protein isoform 1 [Ho... 40 0.024
gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens] 39 0.032
gi|215982794 myosin VA isoform 2 [Homo sapiens] 39 0.041
gi|215982791 myosin VA isoform 1 [Homo sapiens] 39 0.041
gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens] 39 0.054
gi|4507357 transgelin 2 [Homo sapiens] 39 0.054
gi|122937512 myosin VIIB [Homo sapiens] 39 0.054
gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens] 38 0.070
gi|5454102 transforming, acidic coiled-coil containing protein 3... 38 0.070
gi|224451032 KIAA1683 isoform a [Homo sapiens] 38 0.092
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 38 0.092
gi|224451036 KIAA1683 isoform c [Homo sapiens] 38 0.092
gi|54606862 KIAA1683 isoform b [Homo sapiens] 38 0.092
gi|28269672 serologically defined colon cancer antigen 8 [Homo s... 38 0.092
gi|156119615 myosin IXA [Homo sapiens] 37 0.12
gi|189083802 myosin VIIA isoform 2 [Homo sapiens] 37 0.12
>gi|39753961 IQ motif containing GTPase activating protein 3 [Homo
sapiens]
Length = 1631
Score = 3200 bits (8298), Expect = 0.0
Identities = 1631/1631 (100%), Positives = 1631/1631 (100%)
Query: 1 MERRAAGPGWAAYERLTAEEMDEQRRQNVAYQYLCRLEEAKRWMEACLKEELPSPVELEE 60
MERRAAGPGWAAYERLTAEEMDEQRRQNVAYQYLCRLEEAKRWMEACLKEELPSPVELEE
Sbjct: 1 MERRAAGPGWAAYERLTAEEMDEQRRQNVAYQYLCRLEEAKRWMEACLKEELPSPVELEE 60
Query: 61 SLRNGVLLAKLGHCFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPS 120
SLRNGVLLAKLGHCFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPS
Sbjct: 61 SLRNGVLLAKLGHCFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPS 120
Query: 121 TFFPETTDIYDKKNMPRVVYCIHALSLFLFRLGLAPQIHDLYGKVKFTAEELSNMASELA 180
TFFPETTDIYDKKNMPRVVYCIHALSLFLFRLGLAPQIHDLYGKVKFTAEELSNMASELA
Sbjct: 121 TFFPETTDIYDKKNMPRVVYCIHALSLFLFRLGLAPQIHDLYGKVKFTAEELSNMASELA 180
Query: 181 KYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINEAVERGVVEDTLAALQNPSALLENL 240
KYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINEAVERGVVEDTLAALQNPSALLENL
Sbjct: 181 KYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINEAVERGVVEDTLAALQNPSALLENL 240
Query: 241 REPLAAVYQEMLAQAKMEKAANARNHDDRESQDIYDHYLTQAEIQGNINHVNVHGALEVV 300
REPLAAVYQEMLAQAKMEKAANARNHDDRESQDIYDHYLTQAEIQGNINHVNVHGALEVV
Sbjct: 241 REPLAAVYQEMLAQAKMEKAANARNHDDRESQDIYDHYLTQAEIQGNINHVNVHGALEVV 300
Query: 301 DDALERQSPEALLKALQDPALALRGVRRDFADWYLEQLNSDREQKAQELGLVELLEKEEV 360
DDALERQSPEALLKALQDPALALRGVRRDFADWYLEQLNSDREQKAQELGLVELLEKEEV
Sbjct: 301 DDALERQSPEALLKALQDPALALRGVRRDFADWYLEQLNSDREQKAQELGLVELLEKEEV 360
Query: 361 QAGVAAANTKGDQEQAMLHAVQRINKAIRRGVAADTVKELMCPEAQLPPVYPVASSMYQL 420
QAGVAAANTKGDQEQAMLHAVQRINKAIRRGVAADTVKELMCPEAQLPPVYPVASSMYQL
Sbjct: 361 QAGVAAANTKGDQEQAMLHAVQRINKAIRRGVAADTVKELMCPEAQLPPVYPVASSMYQL 420
Query: 421 ELAVLQQQQGELGQEELFVAVEMLSAVVLINRALEARDASGFWSSLVNPATGLAEVEGEN 480
ELAVLQQQQGELGQEELFVAVEMLSAVVLINRALEARDASGFWSSLVNPATGLAEVEGEN
Sbjct: 421 ELAVLQQQQGELGQEELFVAVEMLSAVVLINRALEARDASGFWSSLVNPATGLAEVEGEN 480
Query: 481 AQRYFDALLKLRQERGMGEDFLSWNDLQATVSQVNAQTQEETDRVLAVSLINEALDKGSP 540
AQRYFDALLKLRQERGMGEDFLSWNDLQATVSQVNAQTQEETDRVLAVSLINEALDKGSP
Sbjct: 481 AQRYFDALLKLRQERGMGEDFLSWNDLQATVSQVNAQTQEETDRVLAVSLINEALDKGSP 540
Query: 541 EKTLSALLLPAAGLDDVSLPVAPRYHLLLVAAKRQKAQVTGDPGAVLWLEEIRQGVVRAN 600
EKTLSALLLPAAGLDDVSLPVAPRYHLLLVAAKRQKAQVTGDPGAVLWLEEIRQGVVRAN
Sbjct: 541 EKTLSALLLPAAGLDDVSLPVAPRYHLLLVAAKRQKAQVTGDPGAVLWLEEIRQGVVRAN 600
Query: 601 QDTNTAQRMALGVAAINQAIKEGKAAQTERVLRNPAVALRGVVPDCANGYQRALESAMAK 660
QDTNTAQRMALGVAAINQAIKEGKAAQTERVLRNPAVALRGVVPDCANGYQRALESAMAK
Sbjct: 601 QDTNTAQRMALGVAAINQAIKEGKAAQTERVLRNPAVALRGVVPDCANGYQRALESAMAK 660
Query: 661 KQRPADTAFWVQHDMKDGTAYYFHLQTFQGIWEQPPGCPLNTSHLTREEIQSAVTKVTAA 720
KQRPADTAFWVQHDMKDGTAYYFHLQTFQGIWEQPPGCPLNTSHLTREEIQSAVTKVTAA
Sbjct: 661 KQRPADTAFWVQHDMKDGTAYYFHLQTFQGIWEQPPGCPLNTSHLTREEIQSAVTKVTAA 720
Query: 721 YDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIY 780
YDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIY
Sbjct: 721 YDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIY 780
Query: 781 LEWLQYFKANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDY 840
LEWLQYFKANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDY
Sbjct: 781 LEWLQYFKANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDY 840
Query: 841 RILVHAPHPPLSVVRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDI 900
RILVHAPHPPLSVVRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDI
Sbjct: 841 RILVHAPHPPLSVVRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDI 900
Query: 901 KIGLLVKNRITLQEVVSHCKKLTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF 960
KIGLLVKNRITLQEVVSHCKKLTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF
Sbjct: 901 KIGLLVKNRITLQEVVSHCKKLTKRNKEQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLF 960
Query: 961 YLLQTQPIYLAKLIFQMPQNKTTKFMEAVIFSLYNYASSRREAYLLLQLFKTALQEEIKS 1020
YLLQTQPIYLAKLIFQMPQNKTTKFMEAVIFSLYNYASSRREAYLLLQLFKTALQEEIKS
Sbjct: 961 YLLQTQPIYLAKLIFQMPQNKTTKFMEAVIFSLYNYASSRREAYLLLQLFKTALQEEIKS 1020
Query: 1021 KVEQPQDVVTGNPTVVRLVVRFYRNGRGQSALQEILGKVIQDVLEDKVLSVHTDPVHLYK 1080
KVEQPQDVVTGNPTVVRLVVRFYRNGRGQSALQEILGKVIQDVLEDKVLSVHTDPVHLYK
Sbjct: 1021 KVEQPQDVVTGNPTVVRLVVRFYRNGRGQSALQEILGKVIQDVLEDKVLSVHTDPVHLYK 1080
Query: 1081 NWINQTEAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQI 1140
NWINQTEAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQI
Sbjct: 1081 NWINQTEAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQI 1140
Query: 1141 PYGMRYVAKVLKATLAEKFPDATDSEVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGA 1200
PYGMRYVAKVLKATLAEKFPDATDSEVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGA
Sbjct: 1141 PYGMRYVAKVLKATLAEKFPDATDSEVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGA 1200
Query: 1201 LAAPQRHALGAVAQLLQHAAAGKAFSGQSQHLRVLNDYLEETHLKFRKFIHRACQVPEPE 1260
LAAPQRHALGAVAQLLQHAAAGKAFSGQSQHLRVLNDYLEETHLKFRKFIHRACQVPEPE
Sbjct: 1201 LAAPQRHALGAVAQLLQHAAAGKAFSGQSQHLRVLNDYLEETHLKFRKFIHRACQVPEPE 1260
Query: 1261 ERFAVDEYSDMVAVAKPMVYITVGELVNTHRLLLEHQDCIAPDHQDPLHELLEDLGELPT 1320
ERFAVDEYSDMVAVAKPMVYITVGELVNTHRLLLEHQDCIAPDHQDPLHELLEDLGELPT
Sbjct: 1261 ERFAVDEYSDMVAVAKPMVYITVGELVNTHRLLLEHQDCIAPDHQDPLHELLEDLGELPT 1320
Query: 1321 IPDLIGESIAADGHTDLSKLEVSLTLTNKFEGLEADADDSNTRSLLLSTKQLLADIIQFH 1380
IPDLIGESIAADGHTDLSKLEVSLTLTNKFEGLEADADDSNTRSLLLSTKQLLADIIQFH
Sbjct: 1321 IPDLIGESIAADGHTDLSKLEVSLTLTNKFEGLEADADDSNTRSLLLSTKQLLADIIQFH 1380
Query: 1381 PGDTLKEILSLSASREQEAAHKQLMSRRQACTAQTPEPLRRHRSLTAHSLLPLAEKQRRV 1440
PGDTLKEILSLSASREQEAAHKQLMSRRQACTAQTPEPLRRHRSLTAHSLLPLAEKQRRV
Sbjct: 1381 PGDTLKEILSLSASREQEAAHKQLMSRRQACTAQTPEPLRRHRSLTAHSLLPLAEKQRRV 1440
Query: 1441 LRNLRRLEALGLVSARNGYQGLVDELAKDIRNQHRHRHRRKAELVKLQATLQGLSTKTTF 1500
LRNLRRLEALGLVSARNGYQGLVDELAKDIRNQHRHRHRRKAELVKLQATLQGLSTKTTF
Sbjct: 1441 LRNLRRLEALGLVSARNGYQGLVDELAKDIRNQHRHRHRRKAELVKLQATLQGLSTKTTF 1500
Query: 1501 YEEQGDYYSQYIRACLDHLAPDSKSSGKGKKQPSLHYTAAQLLEKGVLVEIEDLPASHFR 1560
YEEQGDYYSQYIRACLDHLAPDSKSSGKGKKQPSLHYTAAQLLEKGVLVEIEDLPASHFR
Sbjct: 1501 YEEQGDYYSQYIRACLDHLAPDSKSSGKGKKQPSLHYTAAQLLEKGVLVEIEDLPASHFR 1560
Query: 1561 NVIFDITPGDEAGKFEVNAKFLGVDMERFQLHYQDLLQLQYEGVAVMKLFNKAKVNVNLL 1620
NVIFDITPGDEAGKFEVNAKFLGVDMERFQLHYQDLLQLQYEGVAVMKLFNKAKVNVNLL
Sbjct: 1561 NVIFDITPGDEAGKFEVNAKFLGVDMERFQLHYQDLLQLQYEGVAVMKLFNKAKVNVNLL 1620
Query: 1621 IFLLNKKFLRK 1631
IFLLNKKFLRK
Sbjct: 1621 IFLLNKKFLRK 1631
>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
sapiens]
Length = 1657
Score = 1916 bits (4964), Expect = 0.0
Identities = 970/1635 (59%), Positives = 1250/1635 (76%), Gaps = 18/1635 (1%)
Query: 14 ERLTAEEMDEQRRQNVAYQYLCRLEEAKRWMEACLKEELPSPVELEESLRNGVLLAKLGH 73
ERLTAEEMDE+RRQNVAY+YLC LEEAKRWMEACL E+LP ELEE LRNGV LAKLG+
Sbjct: 24 ERLTAEEMDERRRQNVAYEYLCHLEEAKRWMEACLGEDLPPTTELEEGLRNGVYLAKLGN 83
Query: 74 CFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPSTFFPETTDIYDKK 133
F+P VV LKKIYD EQ RY+ATGLHFRHTDN+ WL+A+ IGLP F+PETTDIYD+K
Sbjct: 84 FFSPKVVSLKKIYDREQTRYKATGLHFRHTDNVIQWLNAMDEIGLPKIFYPETTDIYDRK 143
Query: 134 NMPRVVYCIHALSLFLFRLGLAPQIHDLYGKVKFTAEELSNMASELAKYGLQLPAFSKIG 193
NMPR +YCIHALSL+LF+LGLAPQI DLYGKV FT EE++NM +EL KYG+Q+PAFSKIG
Sbjct: 144 NMPRCIYCIHALSLYLFKLGLAPQIQDLYGKVDFTEEEINNMKTELEKYGIQMPAFSKIG 203
Query: 194 GILANELSVDEAAVHAAVLAINEAVERGVVEDTLAALQNPSALLENLREPLAAVYQEMLA 253
GILANELSVDEAA+HAAV+AINEA++R + DT AAL+NP+A+L NL EPLA+ YQ++L
Sbjct: 204 GILANELSVDEAALHAAVIAINEAIDRRIPADTFAALKNPNAMLVNLEEPLASTYQDILY 263
Query: 254 QAKMEKAANARNHDDRESQ--DIYDHYLTQAEIQGNINHVNVHGALEVVDDALERQSPEA 311
QAK +K NA+N + + D+Y+ LTQAEIQGNIN VN AL +D ALE+ A
Sbjct: 264 QAKQDKMTNAKNRTENSERERDVYEELLTQAEIQGNINKVNTFSALANIDLALEQGDALA 323
Query: 312 LLKALQDPALALRGVRRDFADWYLEQLNSDREQKAQELGLVELLEKEEVQAGVAAANTKG 371
L +ALQ PAL LRG+++ +DWYL+QL SD++QK Q G + L+KEE+Q+GV AAN+
Sbjct: 324 LFRALQSPALGLRGLQQQNSDWYLKQLLSDKQQKRQS-GQTDPLQKEELQSGVDAANSAA 382
Query: 372 DQEQAMLHAVQRINKAIRRGVAADTVKELMCPEAQLPPVYPVASSMYQLELAVLQQQQGE 431
Q Q L AV IN AI++GVA TV ELM PEAQLP VYP A+ +YQ ELA LQ+Q E
Sbjct: 383 QQYQRRLAAVALINAAIQKGVAEKTVLELMNPEAQLPQVYPFAADLYQKELATLQRQSPE 442
Query: 432 --LGQEELFVAVEMLSAVVLINRALEARDASGFWSSLVNPATGLAEVEGENAQRYFDALL 489
L EL VAVEMLS+V LINRALE+ D + W L + TGL +E EN QRY D L+
Sbjct: 443 HNLTHPELSVAVEMLSSVALINRALESGDVNTVWKQLSSSVTGLTNIEEENCQRYLDELM 502
Query: 490 KLR-QERGMGEDFLSWNDLQATVSQVNAQTQEETDRVLAVSLINEALDKGSPEKTLSALL 548
KL+ Q +F++WND+QA V VN QEE +R+LA+ LINEALD+G +KTL AL
Sbjct: 503 KLKAQAHAENNEFITWNDIQACVDHVNLVVQEEHERILAIGLINEALDEGDAQKTLQALQ 562
Query: 549 LPAAGLDDVSLPVAPRYHLLLVAAKRQKAQVTGDPGAVLWLEEIRQGVVRANQDTNTAQR 608
+PAA L+ V VA Y L+ AKR+KAQ D AVLWL+EI+ G+ ++N+DT AQ+
Sbjct: 563 IPAAKLEGVLAEVAQHYQDTLIRAKREKAQEIQDESAVLWLDEIQGGIWQSNKDTQEAQK 622
Query: 609 MALGVAAINQAIKEGKAAQTERVLRNPAVALRGVVPDCANGYQRALESAMAKKQRPADT- 667
ALG+ AIN+A++ G +T LR+P V L GV+P+C Y L A KK D
Sbjct: 623 FALGIFAINEAVESGDVGKTLSALRSPDVGLYGVIPECGETYHSDLAEAKKKKLAVGDNN 682
Query: 668 AFWVQHDMKDGTAYYFHLQTFQGIWEQPPGCPLNTSHLTREEIQSAVTKVTAAYDRQQLW 727
+ WV+H +K G YY +L+T +G W++PP N+ L+REEIQS+++ VTAAY+R+QLW
Sbjct: 683 SKWVKHWVKGGYYYYHNLETQEGGWDEPPNFVQNSMQLSREEIQSSISGVTAAYNREQLW 742
Query: 728 KANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYF 787
AN G + +LQAR RG+LVRQ+F +FL+ +PA+ IQ+ WRGY+Q+K Y + L Y
Sbjct: 743 LANEGLITRLQARCRGYLVRQEFRSRMNFLKKQIPAITCIQSQWRGYKQKKAYQDRLAYL 802
Query: 788 KANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAP 847
+++ D ++KIQ+ ARM AR++Y RL YF+ ++N I+KIQAF RA KA+DDY+ L++A
Sbjct: 803 RSHKDEVVKIQSLARMHQARKRYRDRLQYFRDHINDIIKIQAFIRANKARDDYKTLINAE 862
Query: 848 HPPLSVVRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVK 907
PP+ VVR+F HLL+QS QDF E +L+K++EEV+ IRSNQQLE DLN+MDIKIGLLVK
Sbjct: 863 DPPMVVVRKFVHLLDQSDQDFQEELDLMKMREEVITLIRSNQQLENDLNLMDIKIGLLVK 922
Query: 908 NRITLQEVVSHCKKLTKRNKEQLSDMMVLDKQKG-LKSLSKEKRQKLEAYQHLFYLLQTQ 966
N+ITLQ+VVSH KKLTK+NKEQLSDMM+++KQKG LK+LSKEKR+KLEAYQHLFYLLQT
Sbjct: 923 NKITLQDVVSHSKKLTKKNKEQLSDMMMINKQKGGLKALSKEKREKLEAYQHLFYLLQTN 982
Query: 967 PIYLAKLIFQMPQNKTTKFMEAVIFSLYNYASSRREAYLLLQLFKTALQEEIKSKVEQPQ 1026
P YLAKLIFQMPQNK+TKFM++VIF+LYNYAS++RE YLLL+LFKTALQEEIKSKV+Q Q
Sbjct: 983 PTYLAKLIFQMPQNKSTKFMDSVIFTLYNYASNQREEYLLLRLFKTALQEEIKSKVDQIQ 1042
Query: 1027 DVVTGNPTVVRLVVRFYRNGRGQSALQEILGKVIQDVLEDKVLSVHTDPVHLYKNWINQT 1086
++VTGNPTV+++VV F R RGQ+AL++IL V++++++DK L++ TDPV +YK+W+NQ
Sbjct: 1043 EIVTGNPTVIKMVVSFNRGARGQNALRQILAPVVKEIMDDKSLNIKTDPVDIYKSWVNQM 1102
Query: 1087 EAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQIPYGMRY 1146
E+QTG+ S LPYDVTPEQAL+H EV+ RLD ++RN+ A+TDKFL AI SSVD+IPYGMR+
Sbjct: 1103 ESQTGEASKLPYDVTPEQALAHEEVKTRLDSSIRNMRAVTDKFLSAIVSSVDKIPYGMRF 1162
Query: 1147 VAKVLKATLAEKFPDATDSEVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQR 1206
+AKVLK +L EKFPDA + E+ K++GNLLYYR++NPA+VAPDAFDI+ ++AGG L QR
Sbjct: 1163 IAKVLKDSLHEKFPDAGEDELLKIIGNLLYYRYMNPAIVAPDAFDIIDLSAGGQLTTDQR 1222
Query: 1207 HALGAVAQLLQHAAAGKAFSGQSQHLRVLNDYLEETHLKFRKFIHRACQVPEPEERFAVD 1266
LG++A++LQHAA+ K F G + HL ++N+YL +++ KFR+F AC VPE +++F VD
Sbjct: 1223 RNLGSIAKMLQHAASNKMFLGDNAHLSIINEYLSQSYQKFRRFFQTACDVPELQDKFNVD 1282
Query: 1267 EYSDMVAVAKPMVYITVGELVNTHRLLLEHQDCIAPDHQDPLHELLEDLGELPTIPDLIG 1326
EYSD+V + KP++YI++GE++NTH LLL+HQD IAP+H DP+HELL+DLGE+PTI LIG
Sbjct: 1283 EYSDLVTLTKPVIYISIGEIINTHTLLLDHQDAIAPEHNDPIHELLDDLGEVPTIESLIG 1342
Query: 1327 ES---IAADGHTDLSKLEVSLTLTNKFEGLEADADDSNTRSLLLSTKQLLADIIQFHPGD 1383
ES + L+K EVSLTLTNKF+ + + + R++LL+TK+L+ D+I+F PG+
Sbjct: 1343 ESSGNLNDPNKEALAKTEVSLTLTNKFDVPGDENAEMDARTILLNTKRLIVDVIRFQPGE 1402
Query: 1384 TLKEILSLSASREQEAAHKQLMSRRQACTAQTPEPLRRHRSLTAHSLLPLAEKQRRVLRN 1443
TL EIL A+ EQEA H++ M RR A+TP+ +++ +S+ S L L EK+ ++
Sbjct: 1403 TLTEILETPATSEQEAEHQRAMQRRAIRDAKTPDKMKKSKSVKEDSNLTLQEKKEKIQTG 1462
Query: 1444 LRRLEALGLVSARNGYQGLVDELAKDIRNQHRHRHRRKAELVKLQATLQGLSTKTTFYEE 1503
L++L LG V +N YQ L++++A+DIRNQ R+R RRKAELVKLQ T L++K TFY E
Sbjct: 1463 LKKLTELGTVDPKNKYQELINDIARDIRNQRRYRQRRKAELVKLQQTYAALNSKATFYGE 1522
Query: 1504 QGDYYSQYIRACLDHLAPDSKSS-------GKGKKQPSLHYTAAQLLEKGVLVEIEDLPA 1556
Q DYY YI+ CLD+LA K S GK K+ SL YTAA+L EKGVL+EIEDL
Sbjct: 1523 QVDYYKSYIKTCLDNLASKGKVSKKPREMKGKKSKKISLKYTAARLHEKGVLLEIEDLQV 1582
Query: 1557 SHFRNVIFDITPGDEAGKFEVNAKFLGVDMERFQLHYQDLLQLQYEGVAVMKLFNKAKVN 1616
+ F+NVIF+I+P +E G FEV AKF+GV ME F LHYQDLLQLQYEGVAVMKLF++AKVN
Sbjct: 1583 NQFKNVIFEISPTEEVGDFEVKAKFMGVQMETFMLHYQDLLQLQYEGVAVMKLFDRAKVN 1642
Query: 1617 VNLLIFLLNKKFLRK 1631
VNLLIFLLNKKF K
Sbjct: 1643 VNLLIFLLNKKFYGK 1657
>gi|116089337 IQ motif containing GTPase activating protein 2 [Homo
sapiens]
Length = 1575
Score = 1232 bits (3187), Expect = 0.0
Identities = 656/1379 (47%), Positives = 925/1379 (67%), Gaps = 45/1379 (3%)
Query: 287 NINHVNVHGALEVVDDALERQSPEALLKALQDPALALRGVRRDFADWYLEQLNSDREQKA 346
+++ +H A+ +++A+E+ E + L++P L V + A Y ++L +++K
Sbjct: 208 SVDEAALHAAVIAINEAVEKGIAEQTVVTLRNPNAVLTLVDDNLAPEYQKELWDAKKKKE 267
Query: 347 QELGLV-------------ELLEKEEVQAGVAAANTKGDQEQAMLHAVQRINKAIRRGVA 393
+ L ELL + E+Q + N + AV IN I G
Sbjct: 268 ENARLKNSCISEEERDAYEELLTQAEIQGNINKVNRQA--------AVDHINAVIPEGDP 319
Query: 394 ADTVKELMCPEAQLPPVYPVASSMYQLELAVLQQQQ--GELGQEELFVAVEMLSAVVLIN 451
+T+ L PEAQLP VYP A++MYQ EL LQ+Q L EEL +AVEMLSAV L+N
Sbjct: 320 ENTLLALKKPEAQLPAVYPFAAAMYQNELFNLQKQNTMNYLAHEELLIAVEMLSAVALLN 379
Query: 452 RALEARDASGFWSSLVNPATGLAEVEGENAQRYFDALLKLRQE-RGMGEDFLSWNDLQAT 510
+ALE+ D + L +PA GL ++ +RY + LL ++ E G+D LSWN++Q
Sbjct: 380 QALESNDLVSVQNQLRSPAIGLNNLDKAYVERYANTLLSVKLEVLSQGQDNLSWNEIQNC 439
Query: 511 VSQVNAQTQEETDRVLAVSLINEALDKGSPEKTLSALLLPAAGLDDVSLPVAPRYHLLLV 570
+ VNAQ QEE DRV+AV INEA+D+G+P +TL LLLP A + DV A Y +L
Sbjct: 440 IDMVNAQIQEENDRVVAVGYINEAIDEGNPLRTLETLLLPTANISDVDPAHAQHYQDVLY 499
Query: 571 AAKRQKAQVTGDPGAVLWLEEIRQGVVRANQDTNTAQRMALGVAAINQAIKEGKAAQTER 630
AK QK + VLWL+EI+Q V AN D + A++ V +NQ ++ K++
Sbjct: 500 HAKSQKLGDSESVSKVLWLDEIQQAVDDANVDEDRAKQWVTLVVDVNQCLEGKKSSDILS 559
Query: 631 VLRNPAVALRGVVPDCANGYQRALESAMA-KKQRPADTAFWVQHDMKDGTAYYFHLQTFQ 689
VL++ ++P+CA+ Y AL A K +R + W++ ++ YY++ + +
Sbjct: 560 VLKSSTSNANDIIPECADKYYDALVKAKELKSERVSSDGSWLKLNLHKKYDYYYNTDSKE 619
Query: 690 GIWEQPPGCPLNTSHLTREEIQSAVTKVTAAYDRQQLWKANVGFVIQLQARLRGFLVRQK 749
W P C S LT +EI+ + +VT Y R+ +W A+ +++ QA G ++R++
Sbjct: 620 SSWVTPESCLYKESWLTGKEIEDIIEEVTVGYIRENIWSASEELLLRFQATSSGPILREE 679
Query: 750 FAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQ 809
F FL V+KIQA W+GY+QRK Y+ Q F N D+I+KIQ+W RM AR+
Sbjct: 680 FEARKSFLHEQEENVVKIQAFWKGYKQRKEYMHRRQTFIDNTDSIVKIQSWFRMATARKS 739
Query: 810 YLRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSVVRRFAHLLNQSQQDFL 869
YL RL YF+ + N IVKIQ+ RA KA+DDY+ LV + +PPL+V+R+F +LL+QS DF
Sbjct: 740 YLSRLQYFRDHNNEIVKIQSLLRANKARDDYKTLVGSENPPLTVIRKFVYLLDQSDLDFQ 799
Query: 870 AEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVKNRITLQEVVSHCKKLTKRNKEQ 929
E E+ +L+EEVV KIR+NQQLE+DLN+MDIKIGLLVKNRITL++V+SH KKL K+ +
Sbjct: 800 EELEVARLREEVVTKIRANQQLEKDLNLMDIKIGLLVKNRITLEDVISHSKKLNKKKGGE 859
Query: 930 LSDMMVLDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPIYLAKLIFQMPQNKTTKFMEAV 989
+ + D Q G+KSLSKE+R+ LE YQ LFYLLQT P+YLAKLIFQMPQNK+TKFM+ V
Sbjct: 860 MEILNNTDNQ-GIKSLSKERRKTLETYQQLFYLLQTNPLYLAKLIFQMPQNKSTKFMDTV 918
Query: 990 IFSLYNYASSRREAYLLLQLFKTALQEEIKSKVEQPQDVVTGNPTVVRLVVRFYRNGRGQ 1049
IF+LYNYAS++RE YLLL+LFKTAL+EEIKSKV+Q QD+VTGNPTV+++VV F R RGQ
Sbjct: 919 IFTLYNYASNQREEYLLLKLFKTALEEEIKSKVDQVQDIVTGNPTVIKMVVSFNRGARGQ 978
Query: 1050 SALQEILGKVIQDVLEDKVLSVHTDPVHLYKNWINQTEAQTGQRSHLPYDVTPEQALSHP 1109
+ L+++L V++++++DK L ++T+PV +YK W+NQ E QTG+ S LPYDVT EQAL++P
Sbjct: 979 NTLRQLLAPVVKEIIDDKSLIINTNPVEVYKAWVNQLETQTGEASKLPYDVTTEQALTYP 1038
Query: 1110 EVQRRLDIALRNLLAMTDKFLLAITSSVDQIPYGMRYVAKVLKATLAEKFPDATDSEVYK 1169
EV+ +L+ ++ NL +TDK L +I SS+D +PYG+RY+AKVLK ++ EKFPDAT+ E+ K
Sbjct: 1039 EVKNKLEASIENLRRVTDKVLNSIISSLDLLPYGLRYIAKVLKNSIHEKFPDATEDELLK 1098
Query: 1170 VVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFSGQS 1229
+VGNLLYYR++NPA+VAPD FDI+ M AGG + + QR LG+VA++LQHAA+ K F G++
Sbjct: 1099 IVGNLLYYRYMNPAIVAPDGFDIIDMTAGGQINSDQRRNLGSVAKVLQHAASNKLFEGEN 1158
Query: 1230 QHLRVLNDYLEETHLKFRKFIHRACQVPEPEERFAVDEYSDMVAVAKPMVYITVGELVNT 1289
+HL +N+YL ET+ +FRK+ AC VPEPEE+F +D+Y+D+V V+KP++YI++ E+++T
Sbjct: 1159 EHLSSMNNYLSETYQEFRKYFKEACNVPEPEEKFNMDKYTDLVTVSKPVIYISIEEIIST 1218
Query: 1290 HRLLLEHQDCIAPDHQDPLHELLEDLGELPTIPDLIGESIA-------ADGHTDLSKLEV 1342
H LLLEHQD IAP+ D L ELL LGE+PT+ +GE A+ + LSK E+
Sbjct: 1219 HSLLLEHQDAIAPEKNDLLSELLGSLGEVPTVESFLGEGAVDPNDPNKANTLSQLSKTEI 1278
Query: 1343 SLTLTNKFEGLEADADDSNTRSLLLSTKQLLADIIQFHPGDTLKEILSLSASREQEAAHK 1402
SL LT+K++ + +A DS RSL++ TK+L+ D+I+ PG+TL EIL A+ +QE H
Sbjct: 1279 SLVLTSKYDIEDGEAIDS--RSLMIKTKKLIIDVIRNQPGNTLTEILETPATAQQEVDHA 1336
Query: 1403 QLMSRRQACTAQTPEPLRRHRSLTAHSLLPLAEKQRRVLRNLRRLEALGLVSARNGYQGL 1462
M R ++TPE ++ +S+ + LPL +K+R++ RNLR LE G VS+ N YQ +
Sbjct: 1337 TDMVSRAMIDSRTPEEMKHSQSMIEDAQLPLEQKKRKIQRNLRTLEQTGHVSSENKYQDI 1396
Query: 1463 VDELAKDIRNQHRHRHRRKAELVKLQATLQGLSTKTTFYEEQGDYYSQYIRACLDHLAPD 1522
++E+AKDIRNQ +R RKAEL KLQ TL L+ K FYEEQ +YY YI+ CLD+L
Sbjct: 1397 LNEIAKDIRNQRIYRKLRKAELAKLQQTLNALNKKAAFYEEQINYYDTYIKTCLDNLKRK 1456
Query: 1523 S-----KSSGKG-----KKQPSLHYTAAQLLEKGVLVEIEDLPASHFRNVIFDITPGDEA 1572
+ K GKG K+ + YTAA+L EKGVL++I+DL + F+NV FDI ++
Sbjct: 1457 NTRRSIKLDGKGEPKGAKRAKPVKYTAAKLHEKGVLLDIDDLQTNQFKNVTFDIIATEDV 1516
Query: 1573 GKFEVNAKFLGVDMERFQLHYQDLLQLQYEGVAVMKLFNKAKVNVNLLIFLLNKKFLRK 1631
G F+V +KFLGV+ME+ QL+ QDLLQ+QYEGVAVMK+F+K KVNVNLLI+LLNKKF K
Sbjct: 1517 GIFDVRSKFLGVEMEKVQLNIQDLLQMQYEGVAVMKMFDKVKVNVNLLIYLLNKKFYGK 1575
Score = 433 bits (1113), Expect = e-121
Identities = 259/600 (43%), Positives = 351/600 (58%), Gaps = 41/600 (6%)
Query: 14 ERLTAEEMDEQRRQNVAYQYLCRLEEAKRWMEACLKEELPSPVELEESLRNGVLLAKLGH 73
ERL+AEEMDE+RRQN+AY+YLC LEEAKRWME CL EELP ELEE LRNGV LAKL
Sbjct: 21 ERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEVCLVEELPPTTELEEGLRNGVYLAKLAK 80
Query: 74 CFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPSTFFPETTDIYDKK 133
FAP +V KKIYDVEQ RY+ +GLHFRHTDN WL A+ IGLP F+PETTD+YD+K
Sbjct: 81 FFAPKMVSEKKIYDVEQTRYKKSGLHFRHTDNTVQWLRAMESIGLPKIFYPETTDVYDRK 140
Query: 134 NMPRVVYCIHALSLFLFRLGLAPQIHDLYGKVKFTAEELSNMASELAKYGLQLPAFSKIG 193
N+PR++YCIHALSL+LF+LG+APQI DL GKV FT EE+SNM EL KYG+Q+P+FSKIG
Sbjct: 141 NIPRMIYCIHALSLYLFKLGIAPQIQDLLGKVDFTEEEISNMRKELEKYGIQMPSFSKIG 200
Query: 194 GILANELSVDEAAVHAAVLAINEAVERGVVEDTLAALQNPSALLENLREPLAAVYQEMLA 253
GILANELSVDEAA+HAAV+AINEAVE+G+ E T+ L+NP+A+L + + LA YQ+ L
Sbjct: 201 GILANELSVDEAALHAAVIAINEAVEKGIAEQTVVTLRNPNAVLTLVDDNLAPEYQKELW 260
Query: 254 QAKMEKAANARNHD---DRESQDIYDHYLTQAEIQGNINHVNVHGALEVVDDALERQSPE 310
AK +K NAR + E +D Y+ LTQAEIQGNIN VN A++ ++ + PE
Sbjct: 261 DAKKKKEENARLKNSCISEEERDAYEELLTQAEIQGNINKVNRQAAVDHINAVIPEGDPE 320
Query: 311 ALLKALQDPALALRGVRRDFADWYLEQLNSDREQKAQELGLVELLEKEEVQAGVAAANTK 370
L AL+ P L V A Y +L + ++Q + L EE+ V
Sbjct: 321 NTLLALKKPEAQLPAVYPFAAAMYQNELFNLQKQNT-----MNYLAHEELLIAV------ 369
Query: 371 GDQEQAMLHAVQRINKAIRRGVAADTVKELMCPEAQL-----PPVYPVASSMYQLELAVL 425
ML AV +N+A+ +L P L V A+++ ++L VL
Sbjct: 370 -----EMLSAVALLNQALESNDLVSVQNQLRSPAIGLNNLDKAYVERYANTLLSVKLEVL 424
Query: 426 QQQQGELGQEELFVAVEMLS-----------AVVLINRALEARDASGFWSSLVNPATGLA 474
Q Q L E+ ++M++ AV IN A++ + +L+ P ++
Sbjct: 425 SQGQDNLSWNEIQNCIDMVNAQIQEENDRVVAVGYINEAIDEGNPLRTLETLLLPTANIS 484
Query: 475 EVEGENAQRYFDALLKLRQERGMGEDFLS---W-NDLQATVSQVNAQTQEETDRVLAVSL 530
+V+ +AQ Y D L + ++ + +S W +++Q V N V V
Sbjct: 485 DVDPAHAQHYQDVLYHAKSQKLGDSESVSKVLWLDEIQQAVDDANVDEDRAKQWVTLVVD 544
Query: 531 INEALDKGSPEKTLSALLLPAAGLDDVSLPVAPRYHLLLVAAKRQKAQVTGDPGAVLWLE 590
+N+ L+ LS L + +D+ A +Y+ LV AK K++ G+ WL+
Sbjct: 545 VNQCLEGKKSSDILSVLKSSTSNANDIIPECADKYYDALVKAKELKSERVSSDGS--WLK 602
Score = 40.4 bits (93), Expect = 0.014
Identities = 26/71 (36%), Positives = 37/71 (52%)
Query: 595 GVVRANQDTNTAQRMALGVAAINQAIKEGKAAQTERVLRNPAVALRGVVPDCANGYQRAL 654
G + AN+ + + V AIN+A+++G A QT LRNP L V + A YQ+ L
Sbjct: 200 GGILANELSVDEAALHAAVIAINEAVEKGIAEQTVVTLRNPNAVLTLVDDNLAPEYQKEL 259
Query: 655 ESAMAKKQRPA 665
A KK+ A
Sbjct: 260 WDAKKKKEENA 270
>gi|4557793 neurofibromin isoform 2 [Homo sapiens]
Length = 2818
Score = 67.8 bits (164), Expect = 8e-11
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 56/300 (18%)
Query: 1004 YLLLQLFKTALQEEIKSKVEQPQDVVTGNPTVVRLVVRFYRNGRGQSALQEILGKVIQDV 1063
+LL QL +E++ + Q + GN ++ ++ F G + LQ++L +++ V
Sbjct: 1251 HLLYQLLWNMFSKEVEL-ADSMQTLFRGN-SLASKIMTFCFKVYGATYLQKLLDPLLRIV 1308
Query: 1064 LEDKVLSVHTDPVHLYKNWINQTEAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALRNLL 1123
+ +W H+ ++V P + E L+ RNLL
Sbjct: 1309 ITSS-------------DW-----------QHVSFEVDPTRL----EPSESLEENQRNLL 1340
Query: 1124 AMTDKFLLAITSSVDQIPYGMRYVAKVLKATLAEKFPDATDSEVYKVVGNLLYYRFLNPA 1183
MT+KF AI SS + P +R V L ++++FP + VG+ ++ RF+NPA
Sbjct: 1341 QMTEKFFHAIISSSSEFPPQLRSVCHCLYQVVSQRFPQNS----IGAVGSAMFLRFINPA 1396
Query: 1184 VVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFSGQSQHLRVLNDYLEETH 1243
+V+P I+ + L ++++LQ A F+ + +H+R ND+++
Sbjct: 1397 IVSPYEAGILDKKPPPRI----ERGLKLMSKILQSIANHVLFT-KEEHMRPFNDFVKSNF 1451
Query: 1244 LKFRKFIHRACQVPEPEERFAVDEYSDMV---AVAKPMVYITVGELVNTHRLLLEHQDCI 1300
+ RF +D SD AV + +I+ G ++ HRLL +Q+ I
Sbjct: 1452 --------------DAARRFFLDIASDCPTSDAVNHSLSFISDGNVLALHRLLWNNQEKI 1497
>gi|109826564 neurofibromin isoform 1 [Homo sapiens]
Length = 2839
Score = 59.3 bits (142), Expect = 3e-08
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 69/317 (21%)
Query: 1004 YLLLQLFKTALQEEIKSKVEQPQDVVTGNPTVVRLVVRFYRNGRGQSALQEILGKVIQDV 1063
+LL QL +E++ + Q + GN ++ ++ F G + LQ++L +++ V
Sbjct: 1251 HLLYQLLWNMFSKEVEL-ADSMQTLFRGN-SLASKIMTFCFKVYGATYLQKLLDPLLRIV 1308
Query: 1064 LEDKVLSVHTDPVHLYKNWINQTEAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALRNLL 1123
+ +W H+ ++V P + E L+ RNLL
Sbjct: 1309 ITSS-------------DW-----------QHVSFEVDPTRL----EPSESLEENQRNLL 1340
Query: 1124 AMTDKFLLAITSSVDQIPYGMRYVAKVL----------KATLAEKFPDATD-------SE 1166
MT+KF AI SS + P +R V L KAT+ EK +
Sbjct: 1341 QMTEKFFHAIISSSSEFPPQLRSVCHCLYQATCHSLLNKATVKEKKENKKSVVSQRFPQN 1400
Query: 1167 VYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFS 1226
VG+ ++ RF+NPA+V+P I+ + L ++++LQ A F+
Sbjct: 1401 SIGAVGSAMFLRFINPAIVSPYEAGILDKKPPPRI----ERGLKLMSKILQSIANHVLFT 1456
Query: 1227 GQSQHLRVLNDYLEETHLKFRKFIHRACQVPEPEERFAVDEYSDMV---AVAKPMVYITV 1283
+ +H+R ND+++ + RF +D SD AV + +I+
Sbjct: 1457 -KEEHMRPFNDFVKSNF--------------DAARRFFLDIASDCPTSDAVNHSLSFISD 1501
Query: 1284 GELVNTHRLLLEHQDCI 1300
G ++ HRLL +Q+ I
Sbjct: 1502 GNVLALHRLLWNNQEKI 1518
>gi|126116596 asp (abnormal spindle)-like, microcephaly associated
[Homo sapiens]
Length = 3477
Score = 54.7 bits (130), Expect = 7e-07
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 15/102 (14%)
Query: 710 IQSAVTKVTAAYDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQA 769
+Q+ +A ++Q++ VI +QAR +GF+ ++KF E + + IKIQA
Sbjct: 2889 LQNHYRAFLSAKHQRQVYLQIRSSVIIIQARSKGFIQKRKFQEIKN-------STIKIQA 2941
Query: 770 HWRGYRQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQYL 811
WR YR +K + + A KIQAW R W A ++YL
Sbjct: 2942 MWRRYRAKK--------YLCKVKAACKIQAWYRCWRAHKEYL 2975
Score = 49.3 bits (116), Expect = 3e-05
Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 20/137 (14%)
Query: 709 EIQSAVTKVTAAYDR---QQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVI 765
+++ A T + AAY +QL K +++Q+ RG+ R K+ ++ L ++I
Sbjct: 1800 QVKKAATCLQAAYRGYKVRQLIKQQSIAALKIQSAFRGYNKRVKY-------QSVLQSII 1852
Query: 766 KIQAHWRGYRQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIV 825
KIQ R YR K + +F A+I +Q+ R W R+Q +RR H + +
Sbjct: 1853 KIQ---RWYRAYKTLHDTRTHFLKTKAAVISLQSAYRGWKVRKQ-IRREH------QAAL 1902
Query: 826 KIQAFFRARKAQDDYRI 842
KIQ+ FR KAQ +R+
Sbjct: 1903 KIQSAFRMAKAQKQFRL 1919
Score = 43.1 bits (100), Expect = 0.002
Identities = 65/281 (23%), Positives = 109/281 (38%), Gaps = 81/281 (28%)
Query: 753 HSHFLRTWLP-AVIKIQAHWRGYRQRKIYL---------------------EWLQYFKAN 790
H HFL A IQAH+RGY+ R+++L E ++Y +
Sbjct: 3021 HEHFLMIKRHRAACLIQAHYRGYKGRQVFLRQKSAALIIQKYIRAREAGKHERIKYIEFK 3080
Query: 791 LDAIIKIQAWARMWAARRQYL------RRLHY-------------------------FQK 819
+I +QA R W R+++L R LH+ K
Sbjct: 3081 KSTVI-LQALVRGWLVRKRFLEQRAKIRLLHFTAAAYYHLNAVRIQRAYKLYLAVKNANK 3139
Query: 820 NVNSIVKIQAFFRARKAQDDY-------RILVHAPHPPLSVVRRFAHLLNQSQQDFLAEA 872
VNS++ IQ +FRAR + + + + H LS R A ++ ++ + FL
Sbjct: 3140 QVNSVICIQRWFRARLQEKRFIQKYHSIKKIEHEGQECLSQRNRAASVIQKAVRHFLLRK 3199
Query: 873 ELLKLQEEVVR-----KIRSNQQLEQDLNIMDIKIGLLVKNRITLQEVVSHCKKLTKRNK 927
+ K +++ + S ++ I I++ L V NR +E KL KR
Sbjct: 3200 KQEKFTSGIIKIQALWRGYSWRKKNDCTKIKAIRLSLQVVNREIREE-----NKLYKRTA 3254
Query: 928 EQLSDMMVLDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPI 968
L ++ K L ++ LEA +HL + + P+
Sbjct: 3255 LALHYLLT---YKHLSAI-------LEALKHLEVVTRLSPL 3285
Score = 40.4 bits (93), Expect = 0.014
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 29/143 (20%)
Query: 710 IQSAVTK-VTAAYDRQQLWKANVGFVIQLQARLRGFLVRQKFA-EHSHFLRTWLP----- 762
IQ A + VT + Q+ + F +Q+ R F+ +++ A H+ RTW
Sbjct: 2821 IQKAFCRMVTRKLETQKCAALRIQFFLQMAVYRRRFVQQKRAAITLQHYFRTWQTRKQFL 2880
Query: 763 ----AVIKIQAHWRGY----RQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQYLRRL 814
A + +Q H+R + QR++YL+ ++I IQA ++ + +R+
Sbjct: 2881 LYRKAAVVLQNHYRAFLSAKHQRQVYLQIRS-------SVIIIQARSKGFIQKRK----- 2928
Query: 815 HYFQKNVNSIVKIQAFFRARKAQ 837
FQ+ NS +KIQA +R +A+
Sbjct: 2929 --FQEIKNSTIKIQAMWRRYRAK 2949
Score = 39.7 bits (91), Expect = 0.024
Identities = 51/246 (20%), Positives = 106/246 (43%), Gaps = 48/246 (19%)
Query: 708 EEIQSAVTKVTAAYDRQQLWKANVGF---VIQLQARLRGFLVRQKFAEHSHFLRTWLPAV 764
++ +SAV + +AY Q K + VI++Q+ R ++ +++F + A
Sbjct: 1630 QKTRSAVIVLQSAYRGMQARKMYIHILTSVIKIQSYYRAYVSKKEFLSLKN-------AT 1682
Query: 765 IKIQA------------HWRG--------YRQRKIYLEWLQYFKANLDAIIKIQAWARMW 804
IK+Q+ H R YR +KI + + + ++ IK+QA+ R +
Sbjct: 1683 IKLQSTVKMKQTRKQYLHLRAAALFIQQCYRSKKIAAQKREEYMQMRESCIKLQAFVRGY 1742
Query: 805 AARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSVVRRFAHLLN-- 862
R+Q + +++ +Q++FR RKA+ Y + A + V++ + H
Sbjct: 1743 LVRKQ-------MRLQRKAVISLQSYFRMRKARQYYLKMYKA----IIVIQNYYHAYKAQ 1791
Query: 863 -QSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVK---NRITLQEVVSH 918
+++FL + + R + Q ++Q +I +KI + R+ Q V+
Sbjct: 1792 VNQRKNFLQVKKAATCLQAAYRGYKVRQLIKQQ-SIAALKIQSAFRGYNKRVKYQSVLQS 1850
Query: 919 CKKLTK 924
K+ +
Sbjct: 1851 IIKIQR 1856
Score = 38.1 bits (87), Expect = 0.070
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 25/165 (15%)
Query: 737 LQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYFKANLDAIIK 796
LQA RG VR+ LR A IQ+++R YRQ+ YF L I K
Sbjct: 2173 LQASFRGVRVRRT-------LRKMQTAATLIQSNYRRYRQQT-------YFN-KLKKITK 2217
Query: 797 IQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSVVRR 856
R WA + + ++ Y K +S++ IQA FR +KA+ +++ A + RR
Sbjct: 2218 T-VQQRYWAMKERNIQFQRY-NKLRHSVIYIQAIFRGKKARRHLKMMHIA---ATLIQRR 2272
Query: 857 FAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIK 901
F L+ + + L + +L + RK R++ + L + ++
Sbjct: 2273 FRTLMMRRRFLSLKKTAIL-----IQRKYRAHLCTKHHLQFLQVQ 2312
Score = 37.7 bits (86), Expect = 0.092
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 40/178 (22%)
Query: 764 VIKIQAHWRGYRQRKIY--------------------LEWLQYFKANLDAIIKIQAWARM 803
+IK QAH R ++QR+ Y ++ L ++ A+I +Q+ R
Sbjct: 1586 IIKFQAHVRKHQQRQKYKKMKKAAVIIQTHFRAYIFAMKVLASYQKTRSAVIVLQSAYRG 1645
Query: 804 WAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSVVRRFAHLLNQ 863
AR+ Y+ L S++KIQ+++RA ++ ++ L +A S V+ + Q
Sbjct: 1646 MQARKMYIHIL-------TSVIKIQSYYRAYVSKKEFLSLKNATIKLQSTVK-----MKQ 1693
Query: 864 SQQDFL-AEAELLKLQEEVVRKIRSNQQLEQDLNIMD--IKI-----GLLVKNRITLQ 913
+++ +L A L +Q+ K + Q+ E+ + + + IK+ G LV+ ++ LQ
Sbjct: 1694 TRKQYLHLRAAALFIQQCYRSKKIAAQKREEYMQMRESCIKLQAFVRGYLVRKQMRLQ 1751
Score = 37.4 bits (85), Expect = 0.12
Identities = 67/287 (23%), Positives = 125/287 (43%), Gaps = 45/287 (15%)
Query: 737 LQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYFKANLDAIIK 796
+Q R R ++R++F I IQ +R + K +L++LQ +A+IK
Sbjct: 2269 IQRRFRTLMMRRRFLSLKK-------TAILIQRKYRAHLCTKHHLQFLQV----QNAVIK 2317
Query: 797 IQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSVVRR 856
IQ+ R W R++ +R +H + IQ+ FR + Y+ L A SVV +
Sbjct: 2318 IQSSYRRWMIRKR-MREMH------RAATFIQSTFRMHRLHMRYQALKQA-----SVVIQ 2365
Query: 857 FAHLLNQS----QQDFLAEAELLKLQEEVVRKIRSNQQLE---QDLNIMDIKI-GLLVKN 908
+ N++ +Q +L + + + R +++ + L+ ++ + LLV+
Sbjct: 2366 QQYQANRAAKLQRQHYLRQRHSAVILQAAFRGMKTRRHLKSMHSSATLIQSRFRSLLVRR 2425
Query: 909 R-ITLQEV---VSHCKKLTKRNKEQLSDMMVLDK-----QKGLKSLSKEKRQKLEAYQHL 959
R I+L++ V + T K +L + L K Q + L +K KL+ Q
Sbjct: 2426 RFISLKKATIFVQRKYRATICAKHKLYQFLHLRKAAITIQSSYRRLMVKK--KLQEMQRA 2483
Query: 960 FYLLQ-TQPIYLAKLIFQMPQNKTTKFMEAVIFSLYNYASSRREAYL 1005
L+Q T +Y + FQ ++ + + + Y A +RE Y+
Sbjct: 2484 AVLIQATFRMYRTYITFQTWKHASILIQQH--YRTYRAAKLQRENYI 2528
Score = 36.6 bits (83), Expect = 0.20
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 40/157 (25%)
Query: 708 EEIQSAVTKVTAAY-----DRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLP 762
E++Q+ + Y RQ+ K +I LQ+R+R + + + +L
Sbjct: 1344 EKVQNKAASLIQGYWRRYSTRQRFLKLKYYSII-LQSRIRMIIAVTSY-------KRYLW 1395
Query: 763 AVIKIQAHWRGYRQRK------------------IYLEWLQ-YFKANLDAIIKIQAWARM 803
A + IQ HWR Y +RK ++ +W Q ++ + A + +Q R
Sbjct: 1396 ATVTIQRHWRAYLRRKQDQQRYEMLKSSTLIIQSMFRKWKQRKMQSQVKATVILQRAFRE 1455
Query: 804 WAARRQYLRRLHYFQKNVNSIVKIQAFFRARKAQDDY 840
W R+Q K NS + IQ+++R K Y
Sbjct: 1456 WHLRKQ--------AKEENSAIIIQSWYRMHKELRKY 1484
Score = 33.9 bits (76), Expect = 1.3
Identities = 35/158 (22%), Positives = 73/158 (46%), Gaps = 28/158 (17%)
Query: 763 AVIKIQAHWRGYRQRKIYL-----------EWLQYFKANLDAIIKIQAWARMWAARRQYL 811
A I IQ H + ++ RK YL + + A+I IQ++ R + R+ +
Sbjct: 2627 AAIIIQKHCKAFKIRKHYLHLRATVVSIQRRYRKLTAVRTQAVICIQSYYRGFKVRKD-I 2685
Query: 812 RRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSVVRRFAHL---LNQSQQDF 868
+ +H + IQ+F+R +A+ DY A + V++ + L + +++F
Sbjct: 2686 QNMH------RAATLIQSFYRMHRAKVDYETKKTA----IVVIQNYYRLYVRVKTERKNF 2735
Query: 869 LAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLV 906
LA + ++ + R ++ Q+L+ N+ + K+ +V
Sbjct: 2736 LAVQKSVRTIQAAFRGMKVRQKLK---NVSEEKMAAIV 2770
Score = 31.6 bits (70), Expect = 6.6
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
Query: 710 IQSAVTKVTAAYDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQA 769
IQS+ ++ Q++ +A + +QA R + F +TW A I IQ
Sbjct: 2464 IQSSYRRLMVKKKLQEMQRA----AVLIQATFRMYRTYITF-------QTWKHASILIQQ 2512
Query: 770 HWRGYRQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQYLRRLH 815
H+R YR K+ E Y + A++ A+ M A RQ LR H
Sbjct: 2513 HYRTYRAAKLQRE--NYIRQWHSAVVIQAAYKGMKA--RQLLREKH 2554
>gi|51093832 GTPase activating protein and VPS9 domains 1 [Homo
sapiens]
Length = 1487
Score = 51.2 bits (121), Expect = 8e-06
Identities = 87/424 (20%), Positives = 174/424 (41%), Gaps = 49/424 (11%)
Query: 885 IRSNQQLEQDLNIMDIKIG--------LLVKNRITLQEVVSHCKKLTK----RNKEQLSD 932
+ S +QL Q LN +K + + RI L ++ + + ++ + L D
Sbjct: 20 VNSEKQLIQRLNADVLKTAEKLYRTAWIAKQQRINLDRLIITSAEASPAECCQHAKILED 79
Query: 933 MMVLDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPIYLAKLIF---QMPQNKTTKFMEAV 989
+D G K L ++ AY L+ P +A + ++ Q T + V
Sbjct: 80 TQFVD---GYKQLGFQET----AYGEFLSRLRENPRLIASSLVAGEKLNQENTQSVIYTV 132
Query: 990 IFSLYNYASSRREAYLLLQLFKTALQEEIKSKVEQPQDVVTGNPTVVRLVVRFYRNG--R 1047
SLY + + LLQ+ + ++ E+K + P+ ++ ++ + + G
Sbjct: 133 FTSLYGNCIMQEDESYLLQVLRYLIEFELKES-DNPRRLLRRGTCAFSILFKLFSEGLFS 191
Query: 1048 GQSALQEILGKVIQDVLEDKVLSVHTDPVHLYKNWI-NQTEAQTGQRSHLPYDVTPEQAL 1106
+ L L + I +L + + TDP L + + +Q E G++ +
Sbjct: 192 AKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPSQQEKLFGEKGSDRF-------- 243
Query: 1107 SHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQIPYGMRYVAKVLKATLAEKFPDATD-S 1165
+VQ ++ L+A+ +KF+ + + P+ +R++ + TL+ D +
Sbjct: 244 -RQKVQEMVESNEAKLVALVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLS--CVDRLEVG 300
Query: 1166 EVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAF 1225
EV + +LL F+ PAVV P+ + I++ A +A R L V +LLQ A +
Sbjct: 301 EVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVA---RFNLMQVGRLLQQLAMTGSE 357
Query: 1226 SGQSQHLRVLNDYLEETHLKFRKFI--HRACQVPEPEERFAVDEYSDMVAVAKPMVYITV 1283
G + L + + F + RA + P + + + +++ +VYIT
Sbjct: 358 EGDPRTKSSLGKFDKSCVAAFLDVVIGGRAVETP------PLSSVNLLEGLSRTVVYITY 411
Query: 1284 GELV 1287
+L+
Sbjct: 412 SQLI 415
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 48.1 bits (113), Expect = 7e-05
Identities = 57/247 (23%), Positives = 106/247 (42%), Gaps = 34/247 (13%)
Query: 711 QSAVTKVTAAYDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAH 770
Q V K A ++ W A I +Q RG+LVR + +R A I +QA+
Sbjct: 793 QQTVRKAITAVALKEAWAA-----IIIQKHCRGYLVRSLY----QLIRM---ATITMQAY 840
Query: 771 WRGYRQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAF 830
RG+ R+ Y + L+ KA + +Q +AR W ARR++ + + F N+ ++Q
Sbjct: 841 SRGFLARRRYRKMLEEHKA-----VILQKYARAWLARRRF-QSIRRFVLNIQLTYRVQ-- 892
Query: 831 FRARKAQDDYRILVHAPHPPLSVVRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQ 890
R +K +D H +V + L D ++ KL+ E+ + +
Sbjct: 893 -RLQKKLEDQNKENH------GLVEKLTSLAALRAGDV---EKIQKLEAELEKAATHRRN 942
Query: 891 LEQD----LNIMDIKIGLLVKNRITLQEVVSHCKKLTKRNKEQLSDMMVLDKQKGLKSLS 946
E+ + ++ K+ L K+ L+ + + E+L + M ++ +
Sbjct: 943 YEEKGKRYRDAVEEKLAKLQKHNSELETQKEQIQLKLQEKTEELKEKMDNLTKQLFDDVQ 1002
Query: 947 KEKRQKL 953
KE+RQ++
Sbjct: 1003 KEERQRM 1009
>gi|4759026 RAS protein activator like 1 [Homo sapiens]
Length = 804
Score = 46.2 bits (108), Expect = 3e-04
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 1048 GQSALQEILGKVIQDVLEDKVLSVHTDPVHLYKNWINQTEAQTGQRSHLPYDVTPEQALS 1107
G L E+L VI V E+K + DP + G+ + + + ALS
Sbjct: 359 GMPYLHEVLKPVISRVFEEKKY-MELDPCKM----------DLGRTRRISF----KGALS 403
Query: 1108 HPEVQRRLDIALRNLLAMTDKFLLAITSSVDQIPYGMRYVAKVLKATLAEKFPDATDSEV 1167
+++ + +L L + AI SV + P MR K L + E+FP A +V
Sbjct: 404 EEQMR---ETSLGLLTGYLGPIVDAIVGSVGRCPPAMRLAFKQLHRRVEERFPQAEHQDV 460
Query: 1168 -YKVVGNLLYYRFLNPAVVAPDAFDI 1192
Y + L+ RF PA++ P FD+
Sbjct: 461 KYLAISGFLFLRFFAPAILTPKLFDL 486
>gi|4506431 RAS p21 protein activator 1 isoform 1 [Homo sapiens]
Length = 1047
Score = 44.7 bits (104), Expect = 8e-04
Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 1099 DVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQIPYGMRYVAKVLKATLAEK 1158
+++P + + +V L L L + +K +A + +P +RY+ L+ ++ K
Sbjct: 829 ELSPSKLEKNEDVNTNLTHLLNILSELVEKIFMAS----EILPPTLRYIYGCLQKSVQHK 884
Query: 1159 FPDATDSEVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQH 1218
+P T +VV ++ R + PA++ P F+I++ + A L VA+ +Q+
Sbjct: 885 WPTNTTMRT-RVVSGFVFLRLICPAILNPRMFNIISDSPSPIAA----RTLILVAKSVQN 939
Query: 1219 AAAGKAFSGQSQHLRVLNDYLEETHLKFRKFIHRACQVPE---PEERFAVDEYSDMVAVA 1275
A F + ++ +N +++ + F+ VPE E D D+ A+
Sbjct: 940 LANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAAL- 998
Query: 1276 KPMVYITVGELVNTHRLLLEHQDCIAPDHQDPLHELLEDLG 1316
H+ C+A H D L L + G
Sbjct: 999 --------------------HEICVA--HSDELRTLSNERG 1017
>gi|12545406 RAS p21 protein activator 1 isoform 2 [Homo sapiens]
Length = 870
Score = 44.7 bits (104), Expect = 8e-04
Identities = 46/221 (20%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 1099 DVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQIPYGMRYVAKVLKATLAEK 1158
+++P + + +V L L L + +K +A + +P +RY+ L+ ++ K
Sbjct: 652 ELSPSKLEKNEDVNTNLTHLLNILSELVEKIFMAS----EILPPTLRYIYGCLQKSVQHK 707
Query: 1159 FPDATDSEVYKVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQH 1218
+P T +VV ++ R + PA++ P F+I++ + A L VA+ +Q+
Sbjct: 708 WPTNTTMRT-RVVSGFVFLRLICPAILNPRMFNIISDSPSPIAA----RTLILVAKSVQN 762
Query: 1219 AAAGKAFSGQSQHLRVLNDYLEETHLKFRKFIHRACQVPE---PEERFAVDEYSDMVAVA 1275
A F + ++ +N +++ + F+ VPE E D D+ A+
Sbjct: 763 LANLVEFGAKEPYMEGVNPFIKSNKHRMIMFLDELGNVPELPDTTEHSRTDLSRDLAAL- 821
Query: 1276 KPMVYITVGELVNTHRLLLEHQDCIAPDHQDPLHELLEDLG 1316
H+ C+A H D L L + G
Sbjct: 822 --------------------HEICVA--HSDELRTLSNERG 840
>gi|222831628 IQ motif containing F5 [Homo sapiens]
Length = 148
Score = 42.0 bits (97), Expect = 0.005
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 23/102 (22%)
Query: 737 LQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGY------RQRKIYLEWLQYFKAN 790
+QA RG LVR+ + LR W+ IQ WR ++R++ LE ++
Sbjct: 18 IQAWWRGMLVRRTLLHAA--LRAWI-----IQCWWRQVLEKLLAKRRRMVLE---FYVQQ 67
Query: 791 LDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFR 832
A +++Q+W RMW R++Y R L N++ IQ ++R
Sbjct: 68 EWAAVRLQSWVRMWCVRQRYCRLL-------NAVRIIQVYWR 102
>gi|38201692 RAS p21 protein activator 3 [Homo sapiens]
Length = 834
Score = 41.2 bits (95), Expect = 0.008
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 1093 RSHLPYDVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLAITSSVDQIPYGMRYVAKVLK 1152
+SH P ++ P + ++ ++ NL D+ AIT S P M + L+
Sbjct: 405 QSHKPCEIDPVKLKDGENLENNME----NLRQYVDRVFHAITESGVSCPTVMCDIFFSLR 460
Query: 1153 ATLAEKFPDATDSEVYKVVGNLLYYRFLNPAVVAPDAFDI 1192
A++F D D Y V + ++ RF PA+++P+ F +
Sbjct: 461 EAAAKRFQDDPDVR-YTAVSSFIFLRFFAPAILSPNLFQL 499
>gi|41281683 disabled homolog 2 interacting protein isoform 2 [Homo
sapiens]
Length = 1065
Score = 39.7 bits (91), Expect = 0.024
Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 1169 KVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFSGQ 1228
+++ L+ RFL PA+++P F+++ A L +A++ Q+ A F +
Sbjct: 391 RLISASLFLRFLCPAIMSPSLFNLLQEYPDDRTA----RTLTLIAKVTQNLANFAKFGSK 446
Query: 1229 SQHLRVLNDYLEETHLKFRKFIHRACQVPEPEERFAVDEYSDMVAVAKPMVYITVG-ELV 1287
+++ +N +LE ++F+ ++ PE + YI +G EL
Sbjct: 447 EEYMSFMNQFLEHEWTNMQRFL---LEISNPETLSNTAGFEG---------YIDLGRELS 494
Query: 1288 NTHRLLLEHQDCIAP---DHQDPLHELLEDL---------GELPTIPDLIGESIAADGHT 1335
+ H LL E + PL +L D+ G+LP DL S G +
Sbjct: 495 SLHSLLWEAVSQLEQSIVSKLGPLPRILRDVHTALSTPGSGQLPGTNDL--ASTPGSGSS 552
Query: 1336 DLSKLEVSLTLTNKFEGL 1353
+S + + N GL
Sbjct: 553 SISAGLQKMVIENDLSGL 570
>gi|94967023 disabled homolog 2 interacting protein isoform 1 [Homo
sapiens]
Length = 1132
Score = 39.7 bits (91), Expect = 0.024
Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 31/198 (15%)
Query: 1169 KVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFSGQ 1228
+++ L+ RFL PA+++P F+++ A L +A++ Q+ A F +
Sbjct: 487 RLISASLFLRFLCPAIMSPSLFNLLQEYPDDRTA----RTLTLIAKVTQNLANFAKFGSK 542
Query: 1229 SQHLRVLNDYLEETHLKFRKFIHRACQVPEPEERFAVDEYSDMVAVAKPMVYITVG-ELV 1287
+++ +N +LE ++F+ ++ PE + YI +G EL
Sbjct: 543 EEYMSFMNQFLEHEWTNMQRFL---LEISNPETLSNTAGFEG---------YIDLGRELS 590
Query: 1288 NTHRLLLEHQDCIAP---DHQDPLHELLEDL---------GELPTIPDLIGESIAADGHT 1335
+ H LL E + PL +L D+ G+LP DL S G +
Sbjct: 591 SLHSLLWEAVSQLEQSIVSKLGPLPRILRDVHTALSTPGSGQLPGTNDL--ASTPGSGSS 648
Query: 1336 DLSKLEVSLTLTNKFEGL 1353
+S + + N GL
Sbjct: 649 SISAGLQKMVIENDLSGL 666
>gi|4758808 RAS protein activator like 2 isoform 1 [Homo sapiens]
Length = 1139
Score = 39.3 bits (90), Expect = 0.032
Identities = 42/200 (21%), Positives = 87/200 (43%), Gaps = 12/200 (6%)
Query: 1169 KVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFSGQ 1228
+++ L+ RFL PA+++P F+++ + L +A+++Q+ A F +
Sbjct: 471 RLISASLFLRFLCPAIMSPSLFNLMQEYPDDRTS----RTLTLIAKVIQNLANFAKFGNK 526
Query: 1229 SQHLRVLNDYLEETHLKFRKFIHRACQVPEPEERFAVDEYSDM---VAVAKPMVYITVGE 1285
+++ +ND+LE ++F+ D Y D+ ++V +++ V +
Sbjct: 527 EEYMAFMNDFLEHEWGGMKRFLLEISNPDTISNTPGFDGYIDLGRELSVLHSLLWEVVSQ 586
Query: 1286 LVNTHRLLLEHQDCIAPDHQDPLHELLEDLGELPTIPDLIGESIAADGHTDLSKLEVSLT 1345
L L Q +A PL +L D+ + T P I + + + S VS +
Sbjct: 587 LDKGENSFL--QATVA--KLGPLPRVLADITKSLTNPTPIQQQLRRFTEHN-SSPNVSGS 641
Query: 1346 LTNKFEGLEADADDSNTRSL 1365
L++ + + D DS+ L
Sbjct: 642 LSSGLQKIFEDPTDSDLHKL 661
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 38.9 bits (89), Expect = 0.041
Identities = 54/226 (23%), Positives = 110/226 (48%), Gaps = 27/226 (11%)
Query: 735 IQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYFKANLDAI 794
I++Q +RG+L+R+K+ A I +Q + RGY Q + Y ++L+ KA A
Sbjct: 771 IRIQKTIRGWLLRKKYLR-------MRKAAITMQRYVRGY-QARCYAKFLRRTKA---AT 819
Query: 795 IKIQAWARMWAARRQY-LRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSV 853
I IQ + RM+ RR+Y +RR + + +Q++ R A++ YR ++ H + +
Sbjct: 820 I-IQKYWRMYVVRRRYKIRRA--------ATIVLQSYLRGFLARNRYRKILR-EHKAVII 869
Query: 854 VRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVKNRITLQ 913
+R L ++ + + + R++ + ++L++ L I + K I ++
Sbjct: 870 QKRVRGWL--ARTHYKRSMHAIIYLQCCFRRMMAKRELKK-LKIEARSVERYKKLHIGME 926
Query: 914 -EVVSHCKKLTKRNKEQLSDMMVLDKQKGLKSLSKEK-RQKLEAYQ 957
+++ +K+ ++NK+ + L +G+ + EK R LE Q
Sbjct: 927 NKIMQLQRKVDEQNKDYKCLVEKLTNLEGIYNSETEKLRSDLERLQ 972
>gi|215982791 myosin VA isoform 1 [Homo sapiens]
Length = 1855
Score = 38.9 bits (89), Expect = 0.041
Identities = 54/226 (23%), Positives = 110/226 (48%), Gaps = 27/226 (11%)
Query: 735 IQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYFKANLDAI 794
I++Q +RG+L+R+K+ A I +Q + RGY Q + Y ++L+ KA A
Sbjct: 771 IRIQKTIRGWLLRKKYLR-------MRKAAITMQRYVRGY-QARCYAKFLRRTKA---AT 819
Query: 795 IKIQAWARMWAARRQY-LRRLHYFQKNVNSIVKIQAFFRARKAQDDYRILVHAPHPPLSV 853
I IQ + RM+ RR+Y +RR + + +Q++ R A++ YR ++ H + +
Sbjct: 820 I-IQKYWRMYVVRRRYKIRRA--------ATIVLQSYLRGFLARNRYRKILR-EHKAVII 869
Query: 854 VRRFAHLLNQSQQDFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVKNRITLQ 913
+R L ++ + + + R++ + ++L++ L I + K I ++
Sbjct: 870 QKRVRGWL--ARTHYKRSMHAIIYLQCCFRRMMAKRELKK-LKIEARSVERYKKLHIGME 926
Query: 914 -EVVSHCKKLTKRNKEQLSDMMVLDKQKGLKSLSKEK-RQKLEAYQ 957
+++ +K+ ++NK+ + L +G+ + EK R LE Q
Sbjct: 927 NKIMQLQRKVDEQNKDYKCLVEKLTNLEGIYNSETEKLRSDLERLQ 972
>gi|7108367 vav 1 guanine nucleotide exchange factor [Homo sapiens]
Length = 845
Score = 38.5 bits (88), Expect = 0.054
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 57 ELEESLRNGVLLAKLGHCFAPSVVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAH- 115
EL ++LR+GVLL +L + P + L+++ LR Q + F NI +LS
Sbjct: 32 ELAQALRDGVLLCQLLNNLLPHAINLREV----NLRPQMS--QFLCLKNIRTFLSTCCEK 85
Query: 116 IGLPSTFFPETTDIYDKKNMPRVVYCIHALS 146
GL + E D++D ++ +V+Y + ALS
Sbjct: 86 FGLKRSELFEAFDLFDVQDFGKVIYTLSALS 116
>gi|4507357 transgelin 2 [Homo sapiens]
Length = 199
Score = 38.5 bits (88), Expect = 0.054
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 14/121 (11%)
Query: 21 MDEQRRQNVAYQYLCRLEEAK-RWMEACLKEELPSPVELEESLRN----GVLLAKLGHCF 75
+ + +Q + QY LE+ +W+ ++++ P E+ +N G +L +L +
Sbjct: 10 LSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINAL 69
Query: 76 APS-VVPLKKIYDVEQLRYQATGLHFRHTDNINFWLSAIAHIGLPSTFFPETTDIYDKKN 134
P P+KKI QA+ + F+ + I+ +L A G+ +T +T D+++ KN
Sbjct: 70 YPEGQAPVKKI--------QASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKN 121
Query: 135 M 135
M
Sbjct: 122 M 122
>gi|122937512 myosin VIIB [Homo sapiens]
Length = 2116
Score = 38.5 bits (88), Expect = 0.054
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 20/118 (16%)
Query: 735 IQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYFKANLDAI 794
+ +Q LRG+ R++F A + +QA WRGY R+ + L F+ L AI
Sbjct: 768 LSIQKVLRGYRYRKEFLRQRR-------AAVTLQAWWRGYCNRRNFKLILVGFE-RLQAI 819
Query: 795 IKIQAWARMWAARRQ-----------YLRRLHYFQKNVNSIVKIQAFFRARKAQDDYR 841
+ Q AR + A RQ YL R Q ++V IQA R A+ +++
Sbjct: 820 ARSQPLARQYQAMRQRTVQLQALCRGYLVR-QQVQAKRRAVVVIQAHARGMAARRNFQ 876
Score = 35.4 bits (80), Expect = 0.46
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 735 IQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIYLEWLQYFKANLDAI 794
+QLQA RG+LVRQ+ ++ AV+ IQAH RG R+ + Q KAN +
Sbjct: 837 VQLQALCRGYLVRQQ-------VQAKRRAVVVIQAHARGMAARRNF----QQRKANAPLV 885
Query: 795 IKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFFRA 833
I + A + R ++ + + K+ F A
Sbjct: 886 IPAEGQKSQGALPAKKRRSIYDTVTDTEMVEKVFGFLPA 924
>gi|226958575 RAS protein activator like 2 isoform 2 [Homo sapiens]
Length = 1280
Score = 38.1 bits (87), Expect = 0.070
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 21/201 (10%)
Query: 1169 KVVGNLLYYRFLNPAVVAPDAFDIVAMAAGGALAAPQRHALGAVAQLLQHAAAGKAFSGQ 1228
+++ L+ RFL PA+++P F+++ + L +A+++Q+ A F +
Sbjct: 619 RLISASLFLRFLCPAIMSPSLFNLMQEYPDDRTS----RTLTLIAKVIQNLANFAKFGNK 674
Query: 1229 SQHLRVLNDYLEETHLKFRKFIHRACQVPEPEERFAVDEYSDMVAVAKPMVYITVG-ELV 1287
+++ +ND+LE ++F+ ++ P+ + YI +G EL
Sbjct: 675 EEYMAFMNDFLEHEWGGMKRFL---LEISNPDTISNTPGFDG---------YIDLGRELS 722
Query: 1288 NTHRLLLE---HQDCIAPDHQDPLHELLEDLGELPTIPDLIGESIAADGHTDLSKLEVSL 1344
H LL E D PL +L D+ + T P I + + + S VS
Sbjct: 723 VLHSLLWEVVSQLDKATVAKLGPLPRVLADITKSLTNPTPIQQQLRRFTEHN-SSPNVSG 781
Query: 1345 TLTNKFEGLEADADDSNTRSL 1365
+L++ + + D DS+ L
Sbjct: 782 SLSSGLQKIFEDPTDSDLHKL 802
>gi|5454102 transforming, acidic coiled-coil containing protein 3
[Homo sapiens]
Length = 838
Score = 38.1 bits (87), Expect = 0.070
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 814 LHYFQKNVNSIVKIQAFFRARKAQDDYRIL------VHAPHPPLS-VVRRFAHLLNQSQQ 866
L Y QK+++++VK Q++ R L +H + L ++ RF ++ Q+ +
Sbjct: 637 LQYSQKDLDAVVKA--------TQEENRELRSRCEELHGKNLELGKIMDRFEEVVYQAME 688
Query: 867 DFLAEAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVKNRITLQEVVSHCKKLTKRN 926
+ + EL K E+ + ++ QL DLN M+ L K +EV+ +K +
Sbjct: 689 EVQKQKELSKA--EIQKVLKEKDQLTTDLNSMEKSFSDLFKRFEKQKEVIEGYRKNEESL 746
Query: 927 KEQLSDMMVLDKQKG-----LKSLSKEKRQ 951
K+ + D + Q+G LK+ ++EK Q
Sbjct: 747 KKCVEDYLARITQEGQRYQALKAHAEEKLQ 776
>gi|224451032 KIAA1683 isoform a [Homo sapiens]
Length = 1367
Score = 37.7 bits (86), Expect = 0.092
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 734 VIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRK 778
VI +QA +RG+L R++ +R W + IQA WRGYR R+
Sbjct: 1117 VITIQAGVRGYLARRR-------IRLWHRGAMVIQATWRGYRVRR 1154
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 37.7 bits (86), Expect = 0.092
Identities = 66/308 (21%), Positives = 124/308 (40%), Gaps = 44/308 (14%)
Query: 871 EAELLKLQEEVVRKIRSNQQLEQDLNIMDIKIGLLVKNRITLQEVVSHCKKLTKRNKEQL 930
+AE +LQ++ K + QL+ ++N + K L++ L E K+ + + E+L
Sbjct: 392 KAEFKQLQQQREEKEQHGLQLQSEINQLHSK---LLETERQLGEAHGRLKEQRQLSSEKL 448
Query: 931 SD--MMVLDKQKGLKSLSKEKRQKLEAYQHLFYLL-QTQPIYLAKLIFQMPQNKTTKFME 987
D V D Q L L ++ ++K+ L + L +T+ + + Q Q+ T K E
Sbjct: 449 MDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQALQ--QSTTAKLRE 506
Query: 988 A------VIFSLYNYASSRREAYLLLQLFKTAL------QEEIKSKVEQPQDVV------ 1029
A V+ + + + LLQ K + +E++ +K++ +
Sbjct: 507 AQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQL 566
Query: 1030 -----TGNPTVVRLVVRFYRNGRGQSALQEILGKVIQD------VLEDKVLSVHTDPVHL 1078
T V +L + QE L +Q+ +D+VLS+ T L
Sbjct: 567 QEKNHTLQEQVTQLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNEL 626
Query: 1079 ------YKNWINQTEAQTGQRSHLPYDVTPEQALSHPEVQRRLDIALRNLLAMTDKFLLA 1132
K ++Q + Q ++ L + ++Q LD A +N L + L
Sbjct: 627 NSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTA-QNALQDKQQELNK 685
Query: 1133 ITSSVDQI 1140
IT+ +DQ+
Sbjct: 686 ITTQLDQV 693
>gi|224451036 KIAA1683 isoform c [Homo sapiens]
Length = 1134
Score = 37.7 bits (86), Expect = 0.092
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 734 VIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRK 778
VI +QA +RG+L R++ +R W + IQA WRGYR R+
Sbjct: 884 VITIQAGVRGYLARRR-------IRLWHRGAMVIQATWRGYRVRR 921
>gi|54606862 KIAA1683 isoform b [Homo sapiens]
Length = 1180
Score = 37.7 bits (86), Expect = 0.092
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Query: 734 VIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRK 778
VI +QA +RG+L R++ +R W + IQA WRGYR R+
Sbjct: 930 VITIQAGVRGYLARRR-------IRLWHRGAMVIQATWRGYRVRR 967
>gi|28269672 serologically defined colon cancer antigen 8 [Homo
sapiens]
Length = 713
Score = 37.7 bits (86), Expect = 0.092
Identities = 85/387 (21%), Positives = 147/387 (37%), Gaps = 42/387 (10%)
Query: 130 YDKKNMPRVVYCIHALSLFLFRLGLAPQIHDLYGKVKFTAEELSNMASE-----LAKYGL 184
+++ NMP + +H ++ + IH L +VKF EELS M ++ L GL
Sbjct: 107 HEETNMPTMHDLVHTIN------DQSQYIHHLEAEVKFCKEELSGMKNKIQVVVLENEGL 160
Query: 185 QLPAFSKIGGILANELSVDEAAVHAAVLAINEAVERGVVEDT------------LAALQN 232
Q S+ E ++ +A+ + I + GV E + AA
Sbjct: 161 QQQLKSQRQEETLREQTLLDASGNMHNSWITTGEDSGVGETSKRPFSHDNADFGKAASAG 220
Query: 233 PSALLENLR---EPLAAVYQEMLAQAKMEKAANARNHDDRESQDIYDHYLTQAEIQGNIN 289
LE L+ E + + L + + A R +D + Q + +L A +
Sbjct: 221 EQLELEKLKLTYEEKCEIEESQLKFLRNDLAEYQRTCEDLKEQLKHKEFLLAANTCNRVG 280
Query: 290 HVNV-----HGALEVVDDALERQSPEALLKALQDPALALRGVRRDFADWYLEQLNSDREQ 344
+ + L + Q+ E L+K D AL VR AD + S EQ
Sbjct: 281 GLCLKCAQHEAVLSQTHTNVHMQTIERLVKERDDLMSALVSVRSSLADTQQREA-SAYEQ 339
Query: 345 KAQELGLVELLEKEEVQAGVAAANTKGDQE-QAMLHAVQRINKAIRRGVAADTVKELMCP 403
Q L + E E+ +A + + + E QA + ++ +R + D +K+ +
Sbjct: 340 VKQVLQISEEANFEKTKALIQCDQLRKELERQAERLEKELASQQEKRAIEKDMMKKEITK 399
Query: 404 EAQLPPVYPVASSMYQLELAVLQ-QQQGELGQEELFVAVEMLSAV--VLINRALEARDAS 460
E + + S M L + Q + Q E +E A+ L + L +R ++
Sbjct: 400 EREY-----MGSKMLILSQNIAQLEAQVEKVTKEKISAINQLEEIQSQLASREMDVTKVC 454
Query: 461 GFWSSLVNPATGLAEVEGENAQRYFDA 487
G +N T + + E E R F A
Sbjct: 455 GEMRYQLN-KTNMEKDEAEKEHREFRA 480
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 37.4 bits (85), Expect = 0.12
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 711 QSAVTKVTAAYDRQQLWKANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAH 770
+ A +AA Q W+A++ L+ R +++QK+ + + R A I IQA
Sbjct: 1069 KDAFVMASAAALLQASWRAHLERQRYLELRAAAIVIQQKWRD---YYRRRHMAAICIQAR 1125
Query: 771 WRGYRQRKIYLEWLQYFKANLDAIIKIQAWARMWAARRQY 810
W+ YR+ K Y E II +Q+ R + AR+++
Sbjct: 1126 WKAYRESKRYQE-------QRKKIILLQSTCRGFRARQRF 1158
>gi|189083802 myosin VIIA isoform 2 [Homo sapiens]
Length = 2175
Score = 37.4 bits (85), Expect = 0.12
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 50/184 (27%)
Query: 728 KANVGFVIQLQARLRGFLVRQKFAEHSHFLRTWLPAVIKIQAHWRGYRQRKIY----LEW 783
KA VI LQ +RGF R F + + A IQ HWRG+ RK Y L +
Sbjct: 742 KAITDRVILLQKVIRGFKDRSNFLKLKN-------AATLIQRHWRGHNCRKNYGLMRLGF 794
Query: 784 L------------QYFKANLDAIIKIQAWARMWAARRQYLRRLHYFQKNVNSIVKIQAFF 831
L Q ++ II+ QA R + R+ + RL +++ +QA+
Sbjct: 795 LRLQALHRSRKLHQQYRLARQRIIQFQARCRAYLVRKAFRHRLW-------AVLTVQAYA 847
Query: 832 RARKAQDDYRILVHAPHPPLSVVRRFAHLLNQSQQDFLAEAELLKL-QEEVVRKIRSNQQ 890
R ++ R H +++ + EAE ++L +EE +RK S ++
Sbjct: 848 R-------------------GMIARRLHQRLRAEYLWRLEAEKMRLAEEEKLRKEMSAKK 888
Query: 891 LEQD 894
+++
Sbjct: 889 AKEE 892
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,034,125
Number of Sequences: 37866
Number of extensions: 2449047
Number of successful extensions: 8181
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 7785
Number of HSP's gapped (non-prelim): 402
length of query: 1631
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1515
effective length of database: 13,855,062
effective search space: 20990418930
effective search space used: 20990418930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.