Guide to the Human Genome
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Name: SLC29A2 Sequence: fasta or formatted (456aa) NCBI GI: 38708299
Description:

solute carrier family 29 (nucleoside transporters), member 2

Referenced in:

Solute Carrier Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         38           2
 C cysteine            2.4         11           2
 D aspartate           2.9         13           1
 E glutamate           3.3         15           1
 F phenylalanine       8.6         39           2
 G glycine             5.7         26           1
 H histidine           1.1          5           1
 I isoleucine          4.4         20           1
 K lysine              2.4         11           1
 L leucine            17.5         80           3
 M methionine          2.9         13           1
 N asparagine          2.9         13           2
 P proline             6.4         29           1
 Q glutamine           3.7         17           1
 R arginine            2.9         13           1
 S serine              9.2         42           2
 T threonine           6.1         28           1
 V valine              5.7         26           1
 W tryptophan          1.3          6           1
 Y tyrosine            2.4         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 29 (nucleoside transporters), ... 
SLC29A1               0.426   equilibrative nucleoside transporter 1 
SLC29A1               0.426   equilibrative nucleoside transporter 1 
SLC29A1               0.426   equilibrative nucleoside transporter 1 
SLC29A1               0.426   equilibrative nucleoside transporter 1 
SLC29A1               0.426   equilibrative nucleoside transporter 1 
SLC29A3               0.218   solute carrier family 29 (nucleoside transporters),...
SLC29A4               0.114   solute carrier family 29 (nucleoside transporters),...
SLC29A4               0.114   solute carrier family 29 (nucleoside transporters),...
LOC402509             0.059   PREDICTED: similar to solute carrier family 29 (nuc...
LOC402509             0.059   PREDICTED: similar to solute carrier family 29 (nuc...
LOC100132308          0.057   PREDICTED: similar to solute carrier family 29 (nuc...
LOC100132308          0.057   PREDICTED: similar to solute carrier family 29 (nuc...
LOC100293842          0.014   PREDICTED: similar to SLC29A4 protein 
LOC100290340          0.014   PREDICTED: hypothetical protein XP_002347643 
LOC402269             0.014   PREDICTED: similar to SLC29A4 protein 
LOC100287294          0.014   PREDICTED: hypothetical protein XP_002342767 
LOC402269             0.014   PREDICTED: similar to SLC29A4 protein 
LOC728500             0.014   PREDICTED: similar to SLC29A4 protein 
CLN3                  0.013   ceroid-lipofuscinosis, neuronal 3 
CLN3                  0.013   ceroid-lipofuscinosis, neuronal 3 
C20orf54              0.013   hypothetical protein LOC113278 
NAV2                  0.009   neuron navigator 2 isoform 3 
NAV2                  0.009   neuron navigator 2 isoform 1 
NAV2                  0.009   neuron navigator 2 isoform 2 
SLC22A24              0.008   solute carrier family 22, member 24 
MDC1                  0.008   mediator of DNA-damage checkpoint 1 
KCNK4                 0.008   TRAAK 
TMEM161B              0.008   transmembrane protein 161B 
ZNF579                0.006   zinc finger protein 579 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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