ROD1 27078

Name: ROD1	Sequence: fasta or formatted (552aa)		NCBI GI: 38569466
Description: ROD1 regulator of differentiation 1		Referenced in: RNases and RNA Stability
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 47 3 C cysteine 0.9 5 2 D aspartate 4.2 23 2 E glutamate 3.4 19 2 F phenylalanine 4.7 26 2 G glycine 7.4 41 2 H histidine 2.7 15 2 I isoleucine 5.8 32 3 K lysine 5.6 31 2 L leucine 11.1 61 2 M methionine 2.2 12 1 N asparagine 6.0 33 2 P proline 6.9 38 2 Q glutamine 4.9 27 1 R arginine 3.6 20 1 S serine 8.2 45 2 T threonine 5.6 31 1 V valine 6.2 34 2 W tryptophan 0.0 0 0 Y tyrosine 2.2 12 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ROD1 regulator of differentiation 1 PTBP1 0.754 polypyrimidine tract-binding protein 1 isoform a [Hom... PTBP1 0.740 polypyrimidine tract-binding protein 1 isoform b [Ho... PTBP1 0.713 polypyrimidine tract-binding protein 1 isoform c [Ho... PTBP2 0.677 polypyrimidine tract binding protein 2 PTBP1 0.268 polypyrimidine tract-binding protein 1 isoform d [Ho... HNRNPL 0.120 heterogeneous nuclear ribonucleoprotein L isoform a ... HNRPLL 0.120 heterogeneous nuclear ribonucleoprotein L-like isof... HNRPLL 0.120 heterogeneous nuclear ribonucleoprotein L-like isofo... HNRNPL 0.103 heterogeneous nuclear ribonucleoprotein L isoform b ... RBM20 0.039 RNA binding motif protein 20 ELAVL4 0.031 ELAV-like 4 isoform 1 ELAVL4 0.025 ELAV-like 4 isoform 5 ELAVL4 0.025 ELAV-like 4 isoform 4 ELAVL4 0.025 ELAV-like 4 isoform 3 ELAVL4 0.025 ELAV-like 4 isoform 2 MATR3 0.022 matrin 3 MATR3 0.022 matrin 3 BRUNOL4 0.018 bruno-like 4, RNA binding protein isoform 1 ZNF638 0.018 zinc finger protein 638 ZNF638 0.018 zinc finger protein 638 BRUNOL4 0.015 bruno-like 4, RNA binding protein isoform 2 COL4A6 0.014 type IV alpha 6 collagen isoform A precursor BRUNOL4 0.014 bruno-like 4, RNA binding protein isoform 3 COL4A6 0.014 type IV alpha 6 collagen isoform B precursor HTATSF1 0.013 HIV-1 Tat specific factor 1 HTATSF1 0.013 HIV-1 Tat specific factor 1 COL19A1 0.013 alpha 1 type XIX collagen precursor SNRPA 0.013 small nuclear ribonucleoprotein polypeptide A NONO 0.012 non-POU domain containing, octamer-binding isoform ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.