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Search of human proteins with 12545384
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12545384 basic helix-loop-helix transcription factor HAND2
[Homo sapiens]
(217 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H... 448 e-126
gi|4758506 basic helix-loop-helix transcription factor HAND1 [Ho... 199 2e-51
gi|148922889 scleraxis homolog B [Homo sapiens] 79 4e-15
gi|186972126 scleraxis homolog A [Homo sapiens] 79 4e-15
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 78 5e-15
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens] 72 4e-13
gi|239749439 PREDICTED: similar to transcription factor 23 [Homo... 72 4e-13
gi|239743573 PREDICTED: similar to transcription factor 23 [Homo... 72 4e-13
gi|116805332 musculin [Homo sapiens] 68 5e-12
gi|4507741 twist [Homo sapiens] 67 9e-12
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 66 2e-11
gi|239754900 PREDICTED: similar to transcription factor 23 [Homo... 65 4e-11
gi|38202237 transcription factor 21 [Homo sapiens] 65 6e-11
gi|38202239 transcription factor 21 [Homo sapiens] 65 6e-11
gi|17981708 twist homolog 2 [Homo sapiens] 64 1e-10
gi|29126247 basic helix-loop-helix family, member a15 [Homo sapi... 64 1e-10
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 62 3e-10
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 62 5e-10
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 60 1e-09
gi|21553337 atonal homolog 7 [Homo sapiens] 59 2e-09
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 58 5e-09
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 57 2e-08
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 57 2e-08
gi|38455396 neurogenin 1 [Homo sapiens] 55 5e-08
gi|31077092 neurogenin 2 [Homo sapiens] 55 6e-08
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 54 1e-07
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 54 1e-07
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 54 1e-07
gi|116517330 factor in the germline alpha [Homo sapiens] 54 1e-07
gi|206597481 achaete-scute complex-like 4 [Homo sapiens] 53 2e-07
>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
sapiens]
Length = 217
Score = 448 bits (1153), Expect = e-126
Identities = 217/217 (100%), Positives = 217/217 (100%)
Query: 1 MSLVGGFPHHPVVHHEGYPFAAAAAAAAAAAASRCSHEENPYFHGWLIGHPEMSPPDYSM 60
MSLVGGFPHHPVVHHEGYPFAAAAAAAAAAAASRCSHEENPYFHGWLIGHPEMSPPDYSM
Sbjct: 1 MSLVGGFPHHPVVHHEGYPFAAAAAAAAAAAASRCSHEENPYFHGWLIGHPEMSPPDYSM 60
Query: 61 ALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFA 120
ALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFA
Sbjct: 61 ALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFA 120
Query: 121 ELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAEIKKTDVKEEK 180
ELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAEIKKTDVKEEK
Sbjct: 121 ELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAEIKKTDVKEEK 180
Query: 181 RKKELNEILKSTVSSNDKKTKGRTGWPQHVWALELKQ 217
RKKELNEILKSTVSSNDKKTKGRTGWPQHVWALELKQ
Sbjct: 181 RKKELNEILKSTVSSNDKKTKGRTGWPQHVWALELKQ 217
>gi|4758506 basic helix-loop-helix transcription factor HAND1 [Homo
sapiens]
Length = 215
Score = 199 bits (505), Expect = 2e-51
Identities = 120/223 (53%), Positives = 143/223 (64%), Gaps = 14/223 (6%)
Query: 1 MSLVGGFPHHPVVHHEGYPFAAAAAAAAAAAASRCSHEENPYFHGWLIGHPEMSPPDYSM 60
M+LVG + HH HH ASRC H+E PYF WL+ P + PD+
Sbjct: 1 MNLVGSYAHHHHHHHPHPAHPMLHEPFLFGPASRC-HQERPYFQSWLLS-PADAAPDFPA 58
Query: 61 ALSYSPEYASGAAGLDHSHYG-GVPPGAGPPGLG--GPRPVKRRGTANRKERRRTQSINS 117
P A+ AA + YG PG P L G R +R+G+ +KERRRT+SINS
Sbjct: 59 G---GPPPAAAAAA---TAYGPDARPGQSPGRLEALGGRLGRRKGSGPKKERRRTESINS 112
Query: 118 AFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAEIKKTD-V 176
AFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMD+LAKD Q+G+ EAFKAE+KK D
Sbjct: 113 AFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQSGDPEAFKAELKKADGG 172
Query: 177 KEEKRKKEL--NEILKSTVSSNDKKTKGRTGWPQHVWALELKQ 217
+E KRK+EL +E + +K+ KGRTGWPQ VWALEL Q
Sbjct: 173 RESKRKRELQQHEGFPPALGPVEKRIKGRTGWPQQVWALELNQ 215
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 78.6 bits (192), Expect = 4e-15
Identities = 42/85 (49%), Positives = 56/85 (65%)
Query: 81 GGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKT 140
GG G G PG R ++R TAN +ER RT S+N+AF LR IP PAD KLSKI+T
Sbjct: 57 GGRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIET 116
Query: 141 LRLATSYIAYLMDLLAKDDQNGEAE 165
LRLA+SYI++L ++L + G+ +
Sbjct: 117 LRLASSYISHLGNVLLAGEACGDGQ 141
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 78.6 bits (192), Expect = 4e-15
Identities = 42/85 (49%), Positives = 56/85 (65%)
Query: 81 GGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKT 140
GG G G PG R ++R TAN +ER RT S+N+AF LR IP PAD KLSKI+T
Sbjct: 57 GGRRAGGGGPGGRPGREPRQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIET 116
Query: 141 LRLATSYIAYLMDLLAKDDQNGEAE 165
LRLA+SYI++L ++L + G+ +
Sbjct: 117 LRLASSYISHLGNVLLAGEACGDGQ 141
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 78.2 bits (191), Expect = 5e-15
Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 5/114 (4%)
Query: 52 EMSPPDYSMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRR 111
E D S PE A G G GAGP + V++R AN +ER R
Sbjct: 30 ESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVV-----VRQRQAANARERDR 84
Query: 112 TQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAE 165
TQS+N+AF LR IP P D KLSKI+TLRLA+SYIA+L ++L D + +
Sbjct: 85 TQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDSADDGQ 138
>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
Length = 236
Score = 72.0 bits (175), Expect = 4e-13
Identities = 63/189 (33%), Positives = 88/189 (46%), Gaps = 26/189 (13%)
Query: 21 AAAAAAAAAAAASRCSHEEN---------PYFHGWLIGHP-----EMSPPDYSMALSYSP 66
AAAAAAAAAAAA++ + ++ P G P + +P S SP
Sbjct: 35 AAAAAAAAAAAAAQSAQQQQQQQQQQQQAPQLRPAADGQPSGGGHKSAPKQVKRQRSSSP 94
Query: 67 EYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANRKERRRTQSINSAFAELRECI 126
E L+ S +G P P V RR N +ER R + +N FA LRE +
Sbjct: 95 ELMRCKRRLNFSGFGYSLPQQQPAA------VARR---NERERNRVKLVNLGFATLREHV 145
Query: 127 PNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAEIKKTDVKEEKRKKELN 186
PN A+ K+SK++TLR A YI L LL D+ + + AF+A + + +LN
Sbjct: 146 PNGAANKKMSKVETLRSAVEYIRALQQLL--DEHDAVSAAFQAGVLSPTI-SPNYSNDLN 202
Query: 187 EILKSTVSS 195
+ S VSS
Sbjct: 203 SMAGSPVSS 211
>gi|239749439 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 72.0 bits (175), Expect = 4e-13
Identities = 51/119 (42%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 49 GHPEMSPPDYSMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANR-K 107
G P SP LS S E A AA + S G PG PG G R AN +
Sbjct: 4 GRPAGSP------LSASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAAR 57
Query: 108 ERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEA 166
ER R Q++ AF EL+ +P+VP DTKLSK+ L LAT+YIA+L L +DD A+A
Sbjct: 58 ERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSL-QDDAEAPADA 115
>gi|239743573 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 72.0 bits (175), Expect = 4e-13
Identities = 51/119 (42%), Positives = 63/119 (52%), Gaps = 8/119 (6%)
Query: 49 GHPEMSPPDYSMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGPRPVKRRGTANR-K 107
G P SP LS S E A AA + S G PG PG G R AN +
Sbjct: 4 GRPAGSP------LSASAEPAPLAAAIRDSRPGRTGPGPAGPGGGSRSGSGRPAAANAAR 57
Query: 108 ERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEA 166
ER R Q++ AF EL+ +P+VP DTKLSK+ L LAT+YIA+L L +DD A+A
Sbjct: 58 ERSRVQTLRHAFLELQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSL-QDDAEAPADA 115
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 68.2 bits (165), Expect = 5e-12
Identities = 50/127 (39%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 54 SPPDYSMALSYSPE-----YASGAAGLDHSHYGGVPPGAGPPGLGG--------PRPVK- 99
SP D S A P+ A G AG P AG G GG P P K
Sbjct: 40 SPSDNSSAEEEDPDGEEERCALGTAGSAEGCKRKRPRVAGGGGAGGSAGGGGKKPLPAKG 99
Query: 100 --------RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYL 151
+R AN +ER R + ++ AF+ L+ +P VP DTKLSK+ TLRLA+SYIA+L
Sbjct: 100 SAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHL 159
Query: 152 MDLLAKD 158
LL +D
Sbjct: 160 RQLLQED 166
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 67.4 bits (163), Expect = 9e-12
Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
Query: 81 GGVPPGAGPPGLGGPRPVK------RRGTANRKERRRTQSINSAFAELRECIPNVPADTK 134
GG G G GG P +R AN +ER+RTQS+N AFA LR+ IP +P+D K
Sbjct: 84 GGGAGGGGGSSSGGGSPQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSD-K 142
Query: 135 LSKIKTLRLATSYIAYLMDLLAKDD 159
LSKI+TL+LA YI +L +L D+
Sbjct: 143 LSKIQTLKLAARYIDFLYQVLQSDE 167
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 66.2 bits (160), Expect = 2e-11
Identities = 46/125 (36%), Positives = 60/125 (48%), Gaps = 28/125 (22%)
Query: 59 SMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGG-----PRPV--------------- 98
+M L P ++ +G G P GAGP G GG P P
Sbjct: 7 TMELDLPPTHSETESGFSDCGGGAGPDGAGPGGPGGGQARGPEPGEPGRKDLQHLSREER 66
Query: 99 --KRRGTAN------RKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAY 150
+RR TA +ER R ++ N AFAELR+ +P +P D KLSKI+ LRLA YI+Y
Sbjct: 67 RRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISY 126
Query: 151 LMDLL 155
L +L
Sbjct: 127 LNHVL 131
>gi|239754900 PREDICTED: similar to transcription factor 23 [Homo
sapiens]
Length = 167
Score = 65.1 bits (157), Expect = 4e-11
Identities = 50/124 (40%), Positives = 63/124 (50%), Gaps = 18/124 (14%)
Query: 49 GHPEMSPPDYSMALSYSPEYASGAAGLDHSHYGGVPPGAGPPGLGGP------RPVKRRG 102
G P SP LS S E A AA + G PG P GLGG RP
Sbjct: 4 GRPAGSP------LSASAEPAPLAAAIRDXRPGRTGPG--PAGLGGGSCSGSGRPAAENA 55
Query: 103 TANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNG 162
+ER R Q++ AF E++ +P+VP DTKLSK+ L LAT+YIA+L L +DD
Sbjct: 56 A---RERSRVQTLRHAFLEVQRTLPSVPPDTKLSKLDVLLLATTYIAHLTRSL-QDDAEA 111
Query: 163 EAEA 166
A+A
Sbjct: 112 PADA 115
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 64.7 bits (156), Expect = 6e-11
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159
+R AN +ER R + ++ AF+ L+ +P VP DTKLSK+ TLRLA+SYIA+L +LA D
Sbjct: 80 QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDK 139
Query: 160 -QNG 162
+NG
Sbjct: 140 YENG 143
>gi|38202239 transcription factor 21 [Homo sapiens]
Length = 179
Score = 64.7 bits (156), Expect = 6e-11
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159
+R AN +ER R + ++ AF+ L+ +P VP DTKLSK+ TLRLA+SYIA+L +LA D
Sbjct: 80 QRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILANDK 139
Query: 160 -QNG 162
+NG
Sbjct: 140 YENG 143
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 63.9 bits (154), Expect = 1e-10
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159
+R AN +ER+RTQS+N AFA LR+ IP +P+D KLSKI+TL+LA YI +L +L D+
Sbjct: 67 QRILANVRERQRTQSLNEAFAALRKIIPTLPSD-KLSKIQTLKLAARYIDFLYQVLQSDE 125
Query: 160 QNGE 163
+ +
Sbjct: 126 MDNK 129
>gi|29126247 basic helix-loop-helix family, member a15 [Homo
sapiens]
Length = 189
Score = 63.5 bits (153), Expect = 1e-10
Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 88 GPPGLGGPRP--VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLAT 145
GP G GG R ++RR +N +ER+R +N+AF LRE IP+V AD KLSKI+TL LA
Sbjct: 62 GPSGPGGRRDSSIQRRLESNERERQRMHKLNNAFQALREVIPHVRADKKLSKIETLTLAK 121
Query: 146 SYIAYL 151
+YI L
Sbjct: 122 NYIKSL 127
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 62.4 bits (150), Expect = 3e-10
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 95 PRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDL 154
P+ V RR N +ER R Q++N AFAELR+ +P P D KLSK + LRLA YI +L+ L
Sbjct: 146 PQKVARRVFTNSRERWRQQNVNGAFAELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRL 205
Query: 155 L 155
L
Sbjct: 206 L 206
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 61.6 bits (148), Expect = 5e-10
Identities = 34/69 (49%), Positives = 42/69 (60%)
Query: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
V RR N +ER R Q++N AFAELR+ IP P D KLSK + LRLA YI +L LL
Sbjct: 186 VVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLND 245
Query: 158 DDQNGEAEA 166
++ G A
Sbjct: 246 QEEEGTQRA 254
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 60.5 bits (145), Expect = 1e-09
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 101 RGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKD 158
R AN +ERRR QSIN AF LR IP +P + +LSK+ TLRLA YI +L +L+ D
Sbjct: 165 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELVQAD 222
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 59.3 bits (142), Expect = 2e-09
Identities = 42/104 (40%), Positives = 52/104 (50%), Gaps = 21/104 (20%)
Query: 82 GVPPGA--GPPGLGGPR-------------PVKRRGTANRKERRRTQSINSAFAELRECI 126
G P GA PP GG +RR AN +ERRR Q +N+AF LR +
Sbjct: 8 GPPAGARVAPPCAGGTECAGTCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVV 67
Query: 127 PNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEAEAFKAE 170
P D KLSK +TL++A SYI L +LA EAE F +E
Sbjct: 68 PQWGQDKKLSKYETLQMALSYIMALTRILA------EAERFGSE 105
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 58.2 bits (139), Expect = 5e-09
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAK 157
R+ N +ER R Q++NSAFA+LR+ IP P D KLSK +TLRLA YI +L+ +L +
Sbjct: 3 RKIFTNTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGE 60
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 56.6 bits (135), Expect = 2e-08
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 99 KRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLL 155
K R +ER R ++ N AFAELR+ +P +P D KLSKI+ LRLA YI+YL +L
Sbjct: 77 KYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 56.6 bits (135), Expect = 2e-08
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 99 KRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLL 155
K R +ER R ++ N AFAELR+ +P +P D KLSKI+ LRLA YI+YL +L
Sbjct: 77 KYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVL 133
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 55.1 bits (131), Expect = 5e-08
Identities = 29/61 (47%), Positives = 39/61 (63%)
Query: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159
RR AN +ER R ++N+A LR +P+ P DTKL+KI+TLR A +YI L + L D
Sbjct: 93 RRVKANDRERNRMHNLNAALDALRSVLPSFPDDTKLTKIETLRFAYNYIWALAETLRLAD 152
Query: 160 Q 160
Q
Sbjct: 153 Q 153
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 54.7 bits (130), Expect = 6e-08
Identities = 29/63 (46%), Positives = 38/63 (60%)
Query: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDD 159
RR AN +ER R ++N+A LRE +P P D KL+KI+TLR A +YI L + L D
Sbjct: 113 RRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFAHNYIWALTETLRLAD 172
Query: 160 QNG 162
G
Sbjct: 173 HCG 175
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 53.9 bits (128), Expect = 1e-07
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 80 YGGVPPGAGPPGLGG-------PRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPAD 132
Y GV P PG G P +++R N +ER+R + +N +A LR +P A+
Sbjct: 167 YAGVFPYVPFPGAFGVYEYPFEPAFIQKR---NERERQRVKCVNEGYARLRGHLPGALAE 223
Query: 133 TKLSKIKTLRLATSYIAYLMDLLA 156
+LSK++TLR A YI YL +LL+
Sbjct: 224 KRLSKVETLRAAIRYIKYLQELLS 247
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 53.9 bits (128), Expect = 1e-07
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 80 YGGVPPGAGPPGLGG-------PRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPAD 132
Y GV P PG G P +++R N +ER+R + +N +A LR +P A+
Sbjct: 167 YAGVFPYVPFPGAFGVYEYPFEPAFIQKR---NERERQRVKCVNEGYARLRGHLPGALAE 223
Query: 133 TKLSKIKTLRLATSYIAYLMDLLA 156
+LSK++TLR A YI YL +LL+
Sbjct: 224 KRLSKVETLRAAIRYIKYLQELLS 247
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 53.9 bits (128), Expect = 1e-07
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 80 YGGVPPGAGPPGLGG-------PRPVKRRGTANRKERRRTQSINSAFAELRECIPNVPAD 132
Y GV P PG G P +++R N +ER+R + +N +A LR +P A+
Sbjct: 167 YAGVFPYVPFPGAFGVYEYPFEPAFIQKR---NERERQRVKCVNEGYARLRGHLPGALAE 223
Query: 133 TKLSKIKTLRLATSYIAYLMDLLA 156
+LSK++TLR A YI YL +LL+
Sbjct: 224 KRLSKVETLRAAIRYIKYLQELLS 247
>gi|116517330 factor in the germline alpha [Homo sapiens]
Length = 219
Score = 53.5 bits (127), Expect = 1e-07
Identities = 29/70 (41%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 98 VKRRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLL-- 155
++RR AN KER R +++N FA L+ +P +P K SK+ L+ AT YI L DLL
Sbjct: 64 LERRRVANAKERERIKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDLLEG 123
Query: 156 AKDDQNGEAE 165
AKD + + +
Sbjct: 124 AKDSKKQDPD 133
>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
Length = 173
Score = 52.8 bits (125), Expect = 2e-07
Identities = 26/79 (32%), Positives = 43/79 (54%)
Query: 105 NRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQNGEA 164
N +ER+R + +N +A LR+ +P AD +LSK++TLR A YI +L +LL + E
Sbjct: 79 NERERQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELLERQAWGLEG 138
Query: 165 EAFKAEIKKTDVKEEKRKK 183
A ++ + + K
Sbjct: 139 AAGAVPQRRAECNSDGESK 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,783,978
Number of Sequences: 37866
Number of extensions: 518613
Number of successful extensions: 4420
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 3882
Number of HSP's gapped (non-prelim): 482
length of query: 217
length of database: 18,247,518
effective HSP length: 98
effective length of query: 119
effective length of database: 14,536,650
effective search space: 1729861350
effective search space used: 1729861350
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.