PTF1A 25125

Name: PTF1A	Sequence: fasta or formatted (328aa)		NCBI GI: 30039710
Description: pancreas specific transcription factor, 1a		Referenced in: Pancreas and Insulin Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.8 32 6 C cysteine 2.4 8 2 D aspartate 6.4 21 2 E glutamate 6.7 22 1 F phenylalanine 3.7 12 2 G glycine 11.9 39 5 H histidine 1.8 6 1 I isoleucine 2.7 9 2 K lysine 2.4 8 1 L leucine 10.7 35 3 M methionine 0.6 2 1 N asparagine 2.4 8 2 P proline 9.8 32 2 Q glutamine 4.0 13 2 R arginine 7.3 24 5 S serine 8.5 28 2 T threonine 2.4 8 1 V valine 3.0 10 1 W tryptophan 0.6 2 1 Y tyrosine 2.7 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 pancreas specific transcription factor, 1a FERD3L 0.083 nephew of atonal 3 TWIST1 0.077 twist TWIST2 0.072 twist homolog 2 NEUROG2 0.072 neurogenin 2 NEUROG1 0.069 neurogenin 1 BHLHA15 0.064 basic helix-loop-helix family, member a15 OLIG2 0.063 oligodendrocyte lineage transcription factor 2 [Homo... TAL1 0.061 T-cell acute lymphocytic leukemia 1 ATOH8 0.060 atonal homolog 8 ATOH1 0.060 atonal homolog 1 ATOH7 0.060 atonal homolog 7 TCF15 0.058 basic helix-loop-helix transcription factor 15 [Homo... BHLHA9 0.058 PREDICTED: basic helix-loop-helix family, member a9... NHLH1 0.058 nescient helix loop helix 1 BHLHA9 0.057 PREDICTED: basic helix-loop-helix family, member a9... BHLHA9 0.057 PREDICTED: basic helix-loop-helix family, member a9... MSC 0.057 musculin SCXB 0.057 scleraxis homolog B SCXA 0.057 scleraxis homolog A NEUROG3 0.054 neurogenin 3 HAND2 0.054 basic helix-loop-helix transcription factor HAND2 [H... TAL2 0.054 T-cell acute lymphocytic leukemia 2 ASCL5 0.052 PREDICTED: achaete-scute complex homolog 5 (Drosoph... ASCL5 0.052 PREDICTED: achaete-scute complex homolog 5 (Drosoph... ASCL5 0.052 PREDICTED: achaete-scute complex homolog 5 BHLHE23 0.052 basic helix-loop-helix domain containing, class B, 4... MYF6 0.052 myogenic factor 6 ASCL4 0.052 achaete-scute complex-like 4 ASCL3 0.052 ASCL3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.