TCF15 30938

Name: TCF15	Sequence: fasta or formatted (199aa)		NCBI GI: 48255909
Description: basic helix-loop-helix transcription factor 15		Referenced in: Helix-Loop-Helix Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 12.6 25 3 C cysteine 3.0 6 2 D aspartate 5.5 11 2 E glutamate 4.5 9 2 F phenylalanine 2.5 5 1 G glycine 13.6 27 5 H histidine 1.0 2 1 I isoleucine 2.0 4 1 K lysine 2.5 5 1 L leucine 9.0 18 3 M methionine 0.5 1 1 N asparagine 2.5 5 1 P proline 6.5 13 1 Q glutamine 3.5 7 1 R arginine 12.6 25 2 S serine 7.0 14 2 T threonine 3.5 7 1 V valine 6.5 13 4 W tryptophan 0.0 0 0 Y tyrosine 1.0 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 basic helix-loop-helix transcription factor 15 [Homo... SCXB 0.416 scleraxis homolog B SCXA 0.416 scleraxis homolog A HAND2 0.141 basic helix-loop-helix transcription factor HAND2 [H... MSC 0.141 musculin TWIST1 0.139 twist HAND1 0.136 basic helix-loop-helix transcription factor HAND1 [Ho... TCF21 0.125 transcription factor 21 TCF21 0.125 transcription factor 21 BHLHA15 0.120 basic helix-loop-helix family, member a15 ATOH7 0.117 atonal homolog 7 TAL1 0.115 T-cell acute lymphocytic leukemia 1 TWIST2 0.109 twist homolog 2 NHLH1 0.107 nescient helix loop helix 1 LYL1 0.107 lymphoblastic leukemia derived sequence 1 LOC100129654 0.104 PREDICTED: similar to transcription factor 23 [Homo... LOC100129654 0.104 PREDICTED: similar to transcription factor 23 [Homo... NEUROG3 0.104 neurogenin 3 PTF1A 0.101 pancreas specific transcription factor, 1a NEUROG2 0.101 neurogenin 2 TAL2 0.099 T-cell acute lymphocytic leukemia 2 NEUROD2 0.096 neurogenic differentiation 2 OLIG1 0.096 oligodendrocyte transcription factor 1 FERD3L 0.096 nephew of atonal 3 LOC100129654 0.091 PREDICTED: similar to transcription factor 23 [Homo... NEUROG1 0.091 neurogenin 1 NEUROD6 0.091 neurogenic differentiation 6 NHLH2 0.091 nescient helix loop helix 2 NHLH2 0.091 nescient helix loop helix 2 NEUROD1 0.088 neurogenic differentiation 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.