Guide to the Human Genome
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Name: CLEC4G Sequence: fasta or formatted (293aa) NCBI GI: 38348296
Description:

C-type lectin domain family 4, member G

Referenced in:

Lectin Families
Liver

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.6         28           3
 C cysteine            3.8         11           2
 D aspartate           4.4         13           1
 E glutamate           7.5         22           2
 F phenylalanine       2.4          7           2
 G glycine             9.2         27           2
 H histidine           3.1          9           1
 I isoleucine          1.4          4           1
 K lysine              3.1          9           1
 L leucine            11.3         33           2
 M methionine          1.4          4           2
 N asparagine          3.1          9           2
 P proline             2.7          8           1
 Q glutamine           4.4         13           1
 R arginine            7.5         22           2
 S serine              7.2         21           2
 T threonine           6.1         18           2
 V valine              6.1         18           1
 W tryptophan          4.4         13           1
 Y tyrosine            1.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   C-type lectin domain family 4, member G 
FCER2                 0.164   Fc fragment of IgE, low affinity II, receptor for (C...
CD209                 0.135   CD209 molecule isoform 5 
CD209                 0.135   CD209 molecule isoform 7 
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 12 ...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 2 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 8 [...
CLEC4M                0.132   C-type lectin domain family 4, member M isoform 1 [H...
CLEC4M                0.130   C-type lectin domain family 4, member M isoform 7 [...
CLEC4M                0.130   C-type lectin domain family 4, member M isoform 11 ...
CLEC4M                0.128   C-type lectin domain family 4, member M isoform 9 [...
CD209                 0.125   CD209 molecule isoform 3 
CD209                 0.125   CD209 molecule isoform 6 
CD209                 0.125   CD209 molecule isoform 1 
CD209                 0.120   CD209 molecule isoform 4 
ASGR2                 0.118   asialoglycoprotein receptor 2 isoform c 
ASGR2                 0.118   asialoglycoprotein receptor 2 isoform a 
ASGR2                 0.118   asialoglycoprotein receptor 2 isoform a 
CD209                 0.113   CD209 molecule isoform 8 
ASGR2                 0.111   asialoglycoprotein receptor 2 isoform b 
COLEC12               0.111   collectin sub-family member 12 
CLEC10A               0.105   C-type lectin, superfamily member 14 isoform 2 [Homo...
ASGR1                 0.105   asialoglycoprotein receptor 1 
CD207                 0.100   CD207 antigen, langerin 
CLEC10A               0.100   C-type lectin, superfamily member 14 isoform 1 [Homo...
CLEC4E                0.098   C-type lectin domain family 4, member E 
NCAN                  0.086   chondroitin sulfate proteoglycan 3 
CLEC4D                0.084   C-type lectin domain family 4, member D 
BCAN                  0.084   brevican isoform 1 
CLEC4C                0.084   C-type lectin domain family 4, member C isoform 2 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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