Guide to the Human Genome
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Name: ZNF19 Sequence: fasta or formatted (458aa) NCBI GI: 38045956
Description:

zinc finger protein 19

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         22           2
 C cysteine            4.8         22           1
 D aspartate           3.3         15           2
 E glutamate           9.0         41           2
 F phenylalanine       5.0         23           2
 G glycine             7.0         32           1
 H histidine           5.7         26           1
 I isoleucine          4.6         21           1
 K lysine              6.6         30           1
 L leucine             5.7         26           2
 M methionine          1.5          7           2
 N asparagine          3.7         17           1
 P proline             5.5         25           2
 Q glutamine           5.5         25           1
 R arginine            6.3         29           1
 S serine              7.2         33           3
 T threonine           5.7         26           1
 V valine              3.9         18           1
 W tryptophan          0.7          3           1
 Y tyrosine            3.7         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 19 
ZNF383                0.424   zinc finger protein 383 
ZNF34                 0.419   zinc finger protein 34 
ZNF565                0.414   zinc finger protein 565 
ZNF565                0.414   zinc finger protein 565 
ZNF619                0.413   zinc finger protein 619 isoform 2 
ZNF135                0.412   zinc finger protein 135 
ZNF480                0.410   zinc finger protein 480 
ZNF251                0.410   zinc finger protein 251 
ZNF420                0.401   zinc finger protein 420 
ZNF184                0.398   zinc finger protein 184 
ZNF85                 0.398   zinc finger protein 85 
DKFZp686E2433         0.396   hypothetical protein LOC345462 
ZNF79                 0.395   zinc finger protein 79 
ZNF157                0.394   zinc finger protein 157 
ZNF454                0.393   zinc finger protein 454 
ZNF189                0.393   zinc finger protein 189 isoform 1 
ZFP14                 0.391   zinc finger protein 14-like 
ZNF583                0.391   zinc finger protein 583 
ZNF583                0.391   zinc finger protein 583 
ZNF583                0.391   zinc finger protein 583 
ZNF345                0.389   zinc finger protein 345 
ZNF30                 0.389   zinc finger protein 30 isoform b 
ZNF431                0.388   zinc finger protein 431 
ZNF852                0.388   PREDICTED: zinc finger protein 852 
ZNF852                0.388   PREDICTED: zinc finger protein 852 
ZNF167                0.388   zinc finger protein 167 isoform 1 
ZNF708                0.387   zinc finger protein 708 
ZNF582                0.387   zinc finger protein 582 
ZNF595                0.387   zinc finger protein 595 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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