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Search of human proteins with 38045934
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38045934 ring finger protein 138 isoform 2 [Homo sapiens]
(151 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38045934 ring finger protein 138 isoform 2 [Homo sapiens] 321 2e-88
gi|21361539 ring finger protein 138 isoform 1 [Homo sapiens] 244 3e-65
gi|8923898 zinc finger protein 313 [Homo sapiens] 89 2e-18
gi|30520320 ring finger protein 166 [Homo sapiens] 89 2e-18
gi|46852178 potassium channel modulatory factor 1 [Homo sapiens] 61 3e-10
gi|37595555 ring finger protein 125 [Homo sapiens] 58 3e-09
gi|23397670 zinc finger protein 280B [Homo sapiens] 41 4e-04
gi|46397390 pogo transposable element with ZNF domain isoform 1 ... 39 0.002
gi|46397394 pogo transposable element with ZNF domain isoform 2 ... 39 0.002
gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo s... 36 0.014
gi|55741868 zinc finger protein 319 [Homo sapiens] 36 0.014
gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo s... 36 0.014
gi|118918411 zinc finger protein 777 [Homo sapiens] 35 0.019
gi|18158228 zinc finger protein 280A [Homo sapiens] 35 0.019
gi|13376064 zinc finger protein 408 [Homo sapiens] 35 0.032
gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo... 34 0.041
gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo... 34 0.041
gi|24308171 zinc finger protein 280C [Homo sapiens] 34 0.054
gi|148276998 zinc finger protein 628 [Homo sapiens] 34 0.054
gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens] 33 0.070
gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens] 33 0.070
gi|20162564 tripartite motif-containing 40 [Homo sapiens] 33 0.070
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 33 0.12
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 33 0.12
gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens] 33 0.12
gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens] 33 0.12
gi|157676340 zinc finger protein 142 [Homo sapiens] 32 0.16
gi|34878852 tripartite motif-containing 55 isoform 4 [Homo sapiens] 32 0.16
gi|34878844 tripartite motif-containing 55 isoform 3 [Homo sapiens] 32 0.16
gi|34878836 tripartite motif-containing 55 isoform 1 [Homo sapiens] 32 0.16
>gi|38045934 ring finger protein 138 isoform 2 [Homo sapiens]
Length = 151
Score = 321 bits (822), Expect = 2e-88
Identities = 151/151 (100%), Positives = 151/151 (100%)
Query: 1 MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGH 60
MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGH
Sbjct: 1 MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGH 60
Query: 61 PTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQR 120
PTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQR
Sbjct: 61 PTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQR 120
Query: 121 HQFDYGEFVNLQLDEETQYQTAVEESFQVNI 151
HQFDYGEFVNLQLDEETQYQTAVEESFQVNI
Sbjct: 121 HQFDYGEFVNLQLDEETQYQTAVEESFQVNI 151
>gi|21361539 ring finger protein 138 isoform 1 [Homo sapiens]
Length = 245
Score = 244 bits (622), Expect = 3e-65
Identities = 114/114 (100%), Positives = 114/114 (100%)
Query: 38 NRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPI 97
NRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPI
Sbjct: 132 NRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPI 191
Query: 98 CVSLPWGDPSQITRNFVSHLNQRHQFDYGEFVNLQLDEETQYQTAVEESFQVNI 151
CVSLPWGDPSQITRNFVSHLNQRHQFDYGEFVNLQLDEETQYQTAVEESFQVNI
Sbjct: 192 CVSLPWGDPSQITRNFVSHLNQRHQFDYGEFVNLQLDEETQYQTAVEESFQVNI 245
Score = 83.6 bits (205), Expect = 6e-17
Identities = 46/77 (59%), Positives = 51/77 (66%), Gaps = 11/77 (14%)
Query: 1 MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGH 60
MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHV + + E S H
Sbjct: 1 MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQHVFCRKCFLTAMRE-------SGAH 53
Query: 61 PTFKCPLCQESNFTRQR 77
CPLC+ + R+R
Sbjct: 54 ----CPLCRGNVTRRER 66
>gi|8923898 zinc finger protein 313 [Homo sapiens]
Length = 228
Score = 88.6 bits (218), Expect = 2e-18
Identities = 36/85 (42%), Positives = 50/85 (58%)
Query: 62 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRH 121
TF CP C E NF ++ L++HC H V CPIC S+PWGDP+ + NF H+ +RH
Sbjct: 140 TFPCPYCPEKNFDQEGLVEHCKLFHSTDTKSVVCPICASMPWGDPNYRSANFREHIQRRH 199
Query: 122 QFDYGEFVNLQLDEETQYQTAVEES 146
+F Y FV+ +DEE ++ S
Sbjct: 200 RFSYDTFVDYDVDEEDMMNQVLQRS 224
Score = 26.6 bits (57), Expect = 8.6
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 16 FYCPVCQEVLKTPVRTTACQHV 37
F CPVC EV + PV+ C HV
Sbjct: 27 FTCPVCLEVYEKPVQ-VPCGHV 47
>gi|30520320 ring finger protein 166 [Homo sapiens]
Length = 237
Score = 88.6 bits (218), Expect = 2e-18
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 62 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRH 121
TF CP C N +Q L+ HC +H V CPIC ++PWGDPS + NF+ HL RH
Sbjct: 149 TFACPYCGARNLDQQELVKHCVESHRSDPNRVVCPICSAMPWGDPSYKSANFLQHLLHRH 208
Query: 122 QFDYGEFVNLQLDEETQYQTAVEESFQVN 150
+F Y FV+ +DEE +Q A+ S N
Sbjct: 209 KFSYDTFVDYSIDEEAAFQAALALSLSEN 237
Score = 27.3 bits (59), Expect = 5.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQH 36
E + CP+C EV PV +C H
Sbjct: 28 EAQYTCPICLEVYHRPVAIGSCGH 51
>gi|46852178 potassium channel modulatory factor 1 [Homo sapiens]
Length = 381
Score = 61.2 bits (147), Expect = 3e-10
Identities = 35/106 (33%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 18 CPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHP-TFKCPLCQESNFTRQ 76
C C E T R T H + + D Y S P +F CP C + +T
Sbjct: 33 CASCYESGATTTRHTT-DHPMQCILTRVDFDLYYGGEAFSVEQPQSFTCPYCGKMGYTET 91
Query: 77 RLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQ 122
L +H S H V CPIC +LP GDP+ +T +F +HL H+
Sbjct: 92 SLQEHVTSEHAETSTEVICPICAALPGGDPNHVTDDFAAHLTLEHR 137
>gi|37595555 ring finger protein 125 [Homo sapiens]
Length = 232
Score = 58.2 bits (139), Expect = 3e-09
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 65 CPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQFD 124
CP CQ + LLDHC ++H + PV CP+C +P +PS + + + HL H
Sbjct: 141 CPFCQRELY-EDSLLDHCITHHRSERRPVFCPLCRLIPDENPSSFSGSLIRHLQVSHTLF 199
Query: 125 YGEFVNLQLDEETQYQTAVEES 146
Y +F++ + EE + ++ S
Sbjct: 200 YDDFIDFNIIEEALIRRVLDRS 221
Score = 27.7 bits (60), Expect = 3.9
Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 16 FYCPVCQEVLKTPVRTTACQHV 37
F C VC EVL PVR T C HV
Sbjct: 35 FDCAVCLEVLHQPVR-TRCGHV 55
>gi|23397670 zinc finger protein 280B [Homo sapiens]
Length = 543
Score = 40.8 bits (94), Expect = 4e-04
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 32 TACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIV 91
T CQH +R + T + + EN ++ P+ C +C+ S T Q LL H +H +
Sbjct: 343 TTCQHCHR-QFPTPFQLQCHIENVHTAQEPSTVCKICELSFETDQVLLQHMKDHHKPGEM 401
Query: 92 PVTCPIC 98
P C +C
Sbjct: 402 PYVCQVC 408
>gi|46397390 pogo transposable element with ZNF domain isoform 1
[Homo sapiens]
Length = 1410
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 21/103 (20%)
Query: 16 FYCPVCQEVLKTPVRT--------------------TACQHVNRSETSTSDNTETYQENT 55
F CP C + LK +R T CQH R + ST + + EN
Sbjct: 494 FRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYR-QFSTPFQLQCHLENV 552
Query: 56 SSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPIC 98
S T KC +C+ + + L H H +P C +C
Sbjct: 553 HSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVC 595
>gi|46397394 pogo transposable element with ZNF domain isoform 2
[Homo sapiens]
Length = 1357
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 21/103 (20%)
Query: 16 FYCPVCQEVLKTPVRT--------------------TACQHVNRSETSTSDNTETYQENT 55
F CP C + LK +R T CQH R + ST + + EN
Sbjct: 441 FRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYR-QFSTPFQLQCHLENV 499
Query: 56 SSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPIC 98
S T KC +C+ + + L H H +P C +C
Sbjct: 500 HSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVC 542
>gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo
sapiens]
Length = 966
Score = 35.8 bits (81), Expect = 0.014
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 22/108 (20%)
Query: 12 TEDDFYCPVCQEVLKTPVRT---------------------TACQHVNRSETSTSDNTET 50
T F C C ++LK +R T CQH R + T +
Sbjct: 304 THTTFKCFSCLKILKNNIRFMNHMKHHLELEKQSSESWENHTTCQHCYR-QFPTPFQLQC 362
Query: 51 YQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPIC 98
+ E+T + + C +C+ S T LL H NH +P C +C
Sbjct: 363 HIESTHTPHEFSTICKICELSFETEHVLLQHMKDNHKPGEMPYVCQVC 410
>gi|55741868 zinc finger protein 319 [Homo sapiens]
Length = 582
Score = 35.8 bits (81), Expect = 0.014
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 9 TSYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPLC 68
T TE+ F C +C++ P QHV+ ET FKCP+C
Sbjct: 364 THKTEEPFKCGLCEKGFGQPSHLLYHQHVHTLET-------------------LFKCPVC 404
Query: 69 QESNFTRQRLLDH-CNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSH----------- 116
Q+ LL H C + P CP+C + + S + ++ ++H
Sbjct: 405 QKGFDQSAELLRHKCLPGAAER--PFKCPVC-NKAYKRASALQKHQLAHCAAAEKPLRCT 461
Query: 117 LNQRHQFDYGEFVNLQLD 134
L +R F EFV + D
Sbjct: 462 LCERRFFSSSEFVQHRCD 479
Score = 30.4 bits (67), Expect = 0.60
Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 18/96 (18%)
Query: 16 FYCPVCQEVLKTPVRTTACQHVNRSET---------STSDNTETYQENTSSSGHPTFKCP 66
+ CP+CQ+ K + + ++ E S S ++ + S +KC
Sbjct: 202 YSCPICQKPFKHLSELSRHERIHTGEKPYKCTLCDKSFSQSSHLVHHKRTHSSERPYKCA 261
Query: 67 LCQESNFTRQRLL----DHCNSNHLFQIVPVTCPIC 98
+C+++ R L+ H +HLF+ C +C
Sbjct: 262 VCEKTFKHRSHLVRHMYAHSGEHHLFR-----CNVC 292
Score = 28.1 bits (61), Expect = 3.0
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 9 TSYTEDDFYCPVCQEVLKTPVRTTACQHV------------NRSETSTSDNTETYQENTS 56
T +E + C VC++ K R+ +H+ N E +++E Q +
Sbjct: 251 THSSERPYKCAVCEKTFKH--RSHLVRHMYAHSGEHHLFRCNVCELHFKESSELLQHPCT 308
Query: 57 SSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPIC 98
SG F+C CQ++ F R L H + P C +C
Sbjct: 309 PSGERPFRCGECQKA-FKRPSDLRQHERTHSAE-RPFKCDLC 348
>gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo
sapiens]
Length = 979
Score = 35.8 bits (81), Expect = 0.014
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 22/108 (20%)
Query: 12 TEDDFYCPVCQEVLKTPVRT---------------------TACQHVNRSETSTSDNTET 50
T F C C ++LK +R T CQH R + T +
Sbjct: 317 THTTFKCFSCLKILKNNIRFMNHMKHHLELEKQSSESWENHTTCQHCYR-QFPTPFQLQC 375
Query: 51 YQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPIC 98
+ E+T + + C +C+ S T LL H NH +P C +C
Sbjct: 376 HIESTHTPHEFSTICKICELSFETEHVLLQHMKDNHKPGEMPYVCQVC 423
>gi|118918411 zinc finger protein 777 [Homo sapiens]
Length = 831
Score = 35.4 bits (80), Expect = 0.019
Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSE-----------TSTSDNTETYQENTSSSGHP 61
E + CP C++ + + Q V+ + S S + + + +G
Sbjct: 661 ERPYTCPECKKSFRLHISLVIHQRVHAGKHEVSFICSLCGKSFSRPSHLLRHQRTHTGER 720
Query: 62 TFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPIC 98
FKCP C++S + +L +HC + + P CP C
Sbjct: 721 PFKCPECEKSFSEKSKLTNHCRVHSRER--PHACPEC 755
>gi|18158228 zinc finger protein 280A [Homo sapiens]
Length = 542
Score = 35.4 bits (80), Expect = 0.019
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Query: 32 TACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIV 91
T CQH +R + T + + ++ + P+ C +C+ S T Q LL H +H +
Sbjct: 334 TTCQHCHR-QFPTPFQLQCHIDSVHIAMGPSAVCKICELSFETDQVLLQHMKDHHKPGEM 392
Query: 92 PVTCPIC 98
P C +C
Sbjct: 393 PYVCQVC 399
>gi|13376064 zinc finger protein 408 [Homo sapiens]
Length = 720
Score = 34.7 bits (78), Expect = 0.032
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 22/107 (20%)
Query: 10 SYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPLCQ 69
S+T + CPVC + L+ P A + ++ SG F CP C
Sbjct: 545 SHTGEAHLCPVCGKALRDPHTLRAHERLH-------------------SGERPFPCPQCG 585
Query: 70 ESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSH 116
+ +L H S+ + P CP C + + P + R+ +SH
Sbjct: 586 RAYTLATKLRRHLKSH--LEDKPYRCPTC-GMGYTLPQSLRRHQLSH 629
>gi|239757409 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.3 bits (77), Expect = 0.041
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 21/109 (19%)
Query: 8 ATSYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPL 67
AT + F CP+C +V K P + +Q +G F C +
Sbjct: 342 ATGGGDGPFACPLCWKVFKKP-------------------SHLHQHQIIHTGEKPFSCSV 382
Query: 68 CQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSH 116
C +S F R+ L H ++ + C IC + D S + ++ +H
Sbjct: 383 CSKS-FNRRESLKRHVKTHSADLLRLPCGIC-GKAFRDASYLLKHQAAH 429
>gi|239746371 PREDICTED: similar to zinc finger protein 208 [Homo
sapiens]
Length = 1059
Score = 34.3 bits (77), Expect = 0.041
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 21/109 (19%)
Query: 8 ATSYTEDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPL 67
AT + F CP+C +V K P + +Q +G F C +
Sbjct: 342 ATGGGDGPFACPLCWKVFKKP-------------------SHLHQHQIIHTGEKPFSCSV 382
Query: 68 CQESNFTRQRLLDHCNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSH 116
C +S F R+ L H ++ + C IC + D S + ++ +H
Sbjct: 383 CSKS-FNRRESLKRHVKTHSADLLRLPCGIC-GKAFRDASYLLKHQAAH 429
>gi|24308171 zinc finger protein 280C [Homo sapiens]
Length = 737
Score = 33.9 bits (76), Expect = 0.054
Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 22/108 (20%)
Query: 12 TEDDFYCPVCQEVLKTPVRT---------------------TACQHVNRSETSTSDNTET 50
T F C C +VLK +R T CQH R + T +
Sbjct: 312 TYTTFKCFSCSKVLKNNIRFMNHMKHHLELEKQNNESWENHTTCQHCYR-QYPTPFQLQC 370
Query: 51 YQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPIC 98
+ E+T + + C +C+ S T LL H H +P C +C
Sbjct: 371 HIESTHTPHEFSTICKICELSFETEHILLQHMKDTHKPGEMPYVCQVC 418
>gi|148276998 zinc finger protein 628 [Homo sapiens]
Length = 1055
Score = 33.9 bits (76), Expect = 0.054
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 27 TPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNH 86
T R AC +S TS+ + + +T G F+CPLC ++ LL H ++
Sbjct: 557 TGERPHACGVCGKSFAQTSNLRQHQRVHT---GERPFRCPLCPKTFTHSSNLLLHQRTHS 613
Query: 87 LFQIVPVTCPIC 98
+ P TCPIC
Sbjct: 614 AER--PFTCPIC 623
Score = 31.2 bits (69), Expect = 0.35
Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSET---------STSDNTETYQENTSSSGHPTF 63
E + CP C + K +HV+ E S + +T Q +G F
Sbjct: 141 ERPYPCPDCPKAFKNSSSLRRHRHVHTGERPYTCGVCGKSFTQSTNLRQHQRVHTGERPF 200
Query: 64 KCPLCQESNFTRQRLLDH 81
+CPLC ++ LL H
Sbjct: 201 RCPLCPKTFTHSSNLLLH 218
>gi|37588861 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 33.5 bits (75), Expect = 0.070
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 1 MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQH 36
M D++ ++D CP+C VL+ PV+ C+H
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHCEH 36
>gi|5032071 ring finger protein 41 isoform 1 [Homo sapiens]
Length = 317
Score = 33.5 bits (75), Expect = 0.070
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 1 MAEDLSAATSYTEDDFYCPVCQEVLKTPVRTTACQH 36
M D++ ++D CP+C VL+ PV+ C+H
Sbjct: 1 MGYDVTRFQGDVDEDLICPICSGVLEEPVQAPHCEH 36
>gi|20162564 tripartite motif-containing 40 [Homo sapiens]
Length = 229
Score = 33.5 bits (75), Expect = 0.070
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPTFKCPLCQE 70
+++ CP+CQE LK V +T C H+ T + E S+SG F CPLC++
Sbjct: 9 QEEGVCPICQESLKEAV-STNCGHLFCRVCLTQ-----HVEKASASG--VFCCPLCRK 58
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 32.7 bits (73), Expect = 0.12
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 16/83 (19%)
Query: 13 EDDFYCPVCQEVLKTPVRTT--------------ACQHVNRSETSTSDNTETYQENTSSS 58
E + CPVCQ+ K R + C H +S S D+ ++ S+
Sbjct: 304 EKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKS-FSRPDHLNSHVRQVHST 362
Query: 59 GHPTFKCPLCQESNFTRQRLLDH 81
P FKC C+ + T+ RL H
Sbjct: 363 ERP-FKCEKCEAAFATKDRLRAH 384
Score = 26.6 bits (57), Expect = 8.6
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 18/86 (20%)
Query: 36 HVNRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTC 95
H+NR + S SD ++CP+CQ+ + R+ H S+ P C
Sbjct: 293 HLNRHKLSHSDEKP-------------YQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNC 339
Query: 96 PICVSLPWGDPSQITRNFVSHLNQRH 121
C G + SH+ Q H
Sbjct: 340 SHC-----GKSFSRPDHLNSHVRQVH 360
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 32.7 bits (73), Expect = 0.12
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 16/83 (19%)
Query: 13 EDDFYCPVCQEVLKTPVRTT--------------ACQHVNRSETSTSDNTETYQENTSSS 58
E + CPVCQ+ K R + C H +S S D+ ++ S+
Sbjct: 304 EKPYQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNCSHCGKS-FSRPDHLNSHVRQVHST 362
Query: 59 GHPTFKCPLCQESNFTRQRLLDH 81
P FKC C+ + T+ RL H
Sbjct: 363 ERP-FKCEKCEAAFATKDRLRAH 384
Score = 26.6 bits (57), Expect = 8.6
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 18/86 (20%)
Query: 36 HVNRSETSTSDNTETYQENTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTC 95
H+NR + S SD ++CP+CQ+ + R+ H S+ P C
Sbjct: 293 HLNRHKLSHSDEKP-------------YQCPVCQQRFKRKDRMSYHVRSHDGAVHKPYNC 339
Query: 96 PICVSLPWGDPSQITRNFVSHLNQRH 121
C G + SH+ Q H
Sbjct: 340 SHC-----GKSFSRPDHLNSHVRQVH 360
>gi|78482626 ring finger protein 30 isoform 2 [Homo sapiens]
Length = 358
Score = 32.7 bits (73), Expect = 0.12
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPT------FKCP 66
E CP+C E+ PV CQH N +D + S G T F+CP
Sbjct: 21 EKQLICPICLEMFSKPVVILPCQH-NLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCP 79
Query: 67 LCQ 69
C+
Sbjct: 80 SCR 82
>gi|78482627 ring finger protein 30 isoform 1 [Homo sapiens]
Length = 400
Score = 32.7 bits (73), Expect = 0.12
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPT------FKCP 66
E CP+C E+ PV CQH N +D + S G T F+CP
Sbjct: 21 EKQLICPICLEMFSKPVVILPCQH-NLCRKCANDVFQASNPLWQSRGSTTVSSGGRFRCP 79
Query: 67 LCQ 69
C+
Sbjct: 80 SCR 82
>gi|157676340 zinc finger protein 142 [Homo sapiens]
Length = 1687
Score = 32.3 bits (72), Expect = 0.16
Identities = 23/79 (29%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 18 CPVCQEVLKTPVRTTACQ--HVNRSETSTSDNTETYQENTSSSGH--------PTFKCPL 67
CP C R A Q H S +T+ N+ H PT CPL
Sbjct: 1202 CPFCDFSTTRRYRLEAHQSRHTGIGRIPCSSCPQTFGTNSKLRLHRLRVHDKTPTHFCPL 1261
Query: 68 CQESNFTRQRLLDHCNSNH 86
C S + R + H NS H
Sbjct: 1262 CDYSGYLRHDITRHVNSCH 1280
Score = 29.3 bits (64), Expect = 1.3
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 17/127 (13%)
Query: 11 YTEDDFYCPVCQEVL--KTPVRT-------------TACQHVNRSETSTSDNTETYQENT 55
+ + CP CQ+ K+ ++T C + + + + + E+
Sbjct: 186 FPDPSLQCPNCQKFFTSKSKLKTHLLRELGEKAHHCPLCHYSAVERNALNRHMASMHEDI 245
Query: 56 SSSGHPTFKCPLCQESNFTRQRLLDHCNSNHLFQIVPVTCPI-CVSLPWGDPSQITRNFV 114
S+ T+ CP+C+E Q L +H S H P+ C + + F+
Sbjct: 246 SNFYSDTYACPVCREEFRLSQALKEHLKS-HTAAAAAEPLPLRCFQEGCSYAAPDRKAFI 304
Query: 115 SHLNQRH 121
HL + H
Sbjct: 305 KHLKETH 311
>gi|34878852 tripartite motif-containing 55 isoform 4 [Homo
sapiens]
Length = 241
Score = 32.3 bits (72), Expect = 0.16
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPT------FKCP 66
E CP+C E+ PV CQH N SD + + G T F+CP
Sbjct: 21 EKQLICPICLEMFTKPVVILPCQH-NLCRKCASDIFQASNPYLPTRGGTTMASGGRFRCP 79
Query: 67 LCQ 69
C+
Sbjct: 80 SCR 82
>gi|34878844 tripartite motif-containing 55 isoform 3 [Homo
sapiens]
Length = 452
Score = 32.3 bits (72), Expect = 0.16
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPT------FKCP 66
E CP+C E+ PV CQH N SD + + G T F+CP
Sbjct: 21 EKQLICPICLEMFTKPVVILPCQH-NLCRKCASDIFQASNPYLPTRGGTTMASGGRFRCP 79
Query: 67 LCQ 69
C+
Sbjct: 80 SCR 82
>gi|34878836 tripartite motif-containing 55 isoform 1 [Homo
sapiens]
Length = 548
Score = 32.3 bits (72), Expect = 0.16
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 7/63 (11%)
Query: 13 EDDFYCPVCQEVLKTPVRTTACQHVNRSETSTSDNTETYQENTSSSGHPT------FKCP 66
E CP+C E+ PV CQH N SD + + G T F+CP
Sbjct: 21 EKQLICPICLEMFTKPVVILPCQH-NLCRKCASDIFQASNPYLPTRGGTTMASGGRFRCP 79
Query: 67 LCQ 69
C+
Sbjct: 80 SCR 82
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,896,024
Number of Sequences: 37866
Number of extensions: 256161
Number of successful extensions: 1512
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 1358
Number of HSP's gapped (non-prelim): 281
length of query: 151
length of database: 18,247,518
effective HSP length: 93
effective length of query: 58
effective length of database: 14,725,980
effective search space: 854106840
effective search space used: 854106840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.