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Search of human proteins with 37594447
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens]
(296 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens] 643 0.0
gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens] 553 e-158
gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens] 542 e-154
gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens] 542 e-154
gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens] 457 e-129
gi|11968053 zinc finger, DHHC-type containing 6 [Homo sapiens] 104 8e-23
gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens] 100 2e-21
gi|7705949 zinc finger, DHHC-type containing 2 [Homo sapiens] 96 4e-20
gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Hom... 95 6e-20
gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo... 95 6e-20
gi|103471993 huntingtin interacting protein 14 [Homo sapiens] 95 8e-20
gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo... 92 5e-19
gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo s... 91 2e-18
gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo... 89 4e-18
gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo... 89 4e-18
gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo... 89 5e-18
gi|41152072 zinc finger, DHHC domain containing 5 [Homo sapiens] 84 1e-16
gi|56682974 zinc finger, DHHC domain containing 9 [Homo sapiens] 84 1e-16
gi|56682972 zinc finger, DHHC domain containing 9 [Homo sapiens] 84 1e-16
gi|30425538 zinc finger, DHHC-type containing 21 [Homo sapiens] 82 4e-16
gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Ho... 80 2e-15
gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Ho... 80 2e-15
gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens] 80 2e-15
gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens] 79 5e-15
gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens] 74 2e-13
gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens] 74 2e-13
gi|197304688 zinc finger, DHHC-type containing 4 [Homo sapiens] 74 2e-13
gi|197304686 zinc finger, DHHC-type containing 4 [Homo sapiens] 74 2e-13
gi|8922448 zinc finger, DHHC-type containing 4 [Homo sapiens] 74 2e-13
gi|50234886 zinc finger, DHHC domain containing 23 [Homo sapiens] 73 3e-13
>gi|37594447 Abl-philin 2 isoform 4 [Homo sapiens]
Length = 296
Score = 643 bits (1659), Expect = 0.0
Identities = 296/296 (100%), Positives = 296/296 (100%)
Query: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA
Sbjct: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
Query: 61 VDAAFEPVYWLVDNVIRWFGVGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHC 120
VDAAFEPVYWLVDNVIRWFGVGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHC
Sbjct: 61 VDAAFEPVYWLVDNVIRWFGVGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHC 120
Query: 121 PWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRER 180
PWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRER
Sbjct: 121 PWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRER 180
Query: 181 MTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNP 240
MTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNP
Sbjct: 181 MTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNP 240
Query: 241 YNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMAV 296
YNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMAV
Sbjct: 241 YNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMAV 296
>gi|37594451 Abl-philin 2 isoform 2 [Homo sapiens]
Length = 361
Score = 553 bits (1424), Expect = e-158
Identities = 275/361 (76%), Positives = 281/361 (77%), Gaps = 65/361 (18%)
Query: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA
Sbjct: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
Query: 61 VDAAFEPVYWLVDNVIRWFGVGRNDI------ATVSICKKCIYPKPARTHH--------- 105
VDAAFEPVYWLVDNVIRWFGV + + V+I C+ P RT+
Sbjct: 61 VDAAFEPVYWLVDNVIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTYSVPRLCWHFF 120
Query: 106 ---------------------------------CSICNR-----------------CVLK 115
SIC + CVLK
Sbjct: 121 YSHWNLILIVFHYYQAITTPPGYPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLK 180
Query: 116 MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTF 175
MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTF
Sbjct: 181 MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTF 240
Query: 176 SFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGR 235
SFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGR
Sbjct: 241 SFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGR 300
Query: 236 VFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMA 295
VFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMA
Sbjct: 301 VFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMA 360
Query: 296 V 296
V
Sbjct: 361 V 361
>gi|37594449 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 542 bits (1397), Expect = e-154
Identities = 275/377 (72%), Positives = 281/377 (74%), Gaps = 81/377 (21%)
Query: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA
Sbjct: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
Query: 61 VDAAFEPVYWLVDNVIRWFGVGRNDI------ATVSICKKCIYPKPARTHH--------- 105
VDAAFEPVYWLVDNVIRWFGV + + V+I C+ P RT+
Sbjct: 61 VDAAFEPVYWLVDNVIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTYSVPRLCWHFF 120
Query: 106 ---------------------------------CSICNR-----------------CVLK 115
SIC + CVLK
Sbjct: 121 YSHWNLILIVFHYYQAITTPPGYPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLK 180
Query: 116 MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIE---------- 165
MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIE
Sbjct: 181 MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKL 240
Query: 166 ------TYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIE 219
TYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIE
Sbjct: 241 QAVANQTYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIE 300
Query: 220 RHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMS 279
RHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMS
Sbjct: 301 RHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMS 360
Query: 280 WEPPPWVTAHSASVMAV 296
WEPPPWVTAHSASVMAV
Sbjct: 361 WEPPPWVTAHSASVMAV 377
>gi|37594455 Abl-philin 2 isoform 1 [Homo sapiens]
Length = 377
Score = 542 bits (1397), Expect = e-154
Identities = 275/377 (72%), Positives = 281/377 (74%), Gaps = 81/377 (21%)
Query: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA
Sbjct: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
Query: 61 VDAAFEPVYWLVDNVIRWFGVGRNDI------ATVSICKKCIYPKPARTHH--------- 105
VDAAFEPVYWLVDNVIRWFGV + + V+I C+ P RT+
Sbjct: 61 VDAAFEPVYWLVDNVIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTYSVPRLCWHFF 120
Query: 106 ---------------------------------CSICNR-----------------CVLK 115
SIC + CVLK
Sbjct: 121 YSHWNLILIVFHYYQAITTPPGYPPQGRNDIATVSICKKCIYPKPARTHHCSICNRCVLK 180
Query: 116 MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIE---------- 165
MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIE
Sbjct: 181 MDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSYGSWDLFREAYAAIEKMKQLDKNKL 240
Query: 166 ------TYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIE 219
TYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIE
Sbjct: 241 QAVANQTYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETSIE 300
Query: 220 RHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMS 279
RHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMS
Sbjct: 301 RHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHGNGMS 360
Query: 280 WEPPPWVTAHSASVMAV 296
WEPPPWVTAHSASVMAV
Sbjct: 361 WEPPPWVTAHSASVMAV 377
>gi|37594453 Abl-philin 2 isoform 3 [Homo sapiens]
Length = 338
Score = 457 bits (1177), Expect = e-129
Identities = 245/340 (72%), Positives = 256/340 (75%), Gaps = 46/340 (13%)
Query: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA
Sbjct: 1 MRGQRSLLLGPARLCLRLLLLLGYRRRCPPLLRGLVQRWRYGKVCLRSLLYNSFGGSDTA 60
Query: 61 VDAAFEPVYWLVDNVIRWFGVGRNDI------ATVSICKKCIYPKPARTHHCSICNRC-- 112
VDAAFEPVYWLVDNVIRWFGV + + V+I C+ P RT+ S+ C
Sbjct: 61 VDAAFEPVYWLVDNVIRWFGVVFVVLVIVLTGSIVAIAYLCVLPLILRTY--SVPRLCWH 118
Query: 113 --------VLKMDHHCPWLNNCVGH----YNHRYFFSFCF-------FMTLGCVYC-SYG 152
+L + H+ + G+ N S C T C C SYG
Sbjct: 119 FFYSHWNLILIVFHYYQAITTPPGYPPQGRNDIATVSICKKCIYPKPARTHHCSICNSYG 178
Query: 153 SWDLFREAYAAIE----------------TYHQTPPPTFSFRERMTHKSLVYLWFLCSSV 196
SWDLFREAYAAIE TYHQTPPPTFSFRERMTHKSLVYLWFLCSSV
Sbjct: 179 SWDLFREAYAAIEKMKQLDKNKLQAVANQTYHQTPPPTFSFRERMTHKSLVYLWFLCSSV 238
Query: 197 ALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVD 256
ALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVD
Sbjct: 239 ALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVD 298
Query: 257 TGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMAV 296
TGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMAV
Sbjct: 299 TGRHWLTRVLLPSSHLPHGNGMSWEPPPWVTAHSASVMAV 338
>gi|11968053 zinc finger, DHHC-type containing 6 [Homo sapiens]
Length = 413
Score = 104 bits (260), Expect = 8e-23
Identities = 74/245 (30%), Positives = 105/245 (42%), Gaps = 36/245 (14%)
Query: 49 LLYNSFGGSDTAVDAAFEPVYWLVDNVIRWFGVGRNDIATVSICKKCIYPKPARTHHCSI 108
+LYN F V F P+ W + D + CK C K R+HHC
Sbjct: 68 ILYNYFNAM--FVGPGFVPLGWKPEI--------SQDTMYLQYCKVCQAYKAPRSHHCRK 117
Query: 109 CNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY-GSWDLFREAYAAIETY 167
CNRCV+KMDHHCPW+NNC G+ NH F F LGC++ ++ ++ + Y +
Sbjct: 118 CNRCVMKMDHHCPWINNCCGYQNHASFTLFLLLAPLGCIHAAFIFVMTMYTQLYHRLSFG 177
Query: 168 HQTPPPTFSFRER----------MTHKSLVYLWFLCSSVALALGALTVWHAVLISRGETS 217
T S R + ++ L +A+G L +I R +TS
Sbjct: 178 WNTVKIDMSAARRDPLPIVPFGLAAFATTLFALGLALGTTIAVGMLFFIQMKIILRNKTS 237
Query: 218 IERHINKKERRRLQ--AKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVLLPSSHLPHG 275
IE I +K + R+Q VF PY+ G W+ F V T W S +P G
Sbjct: 238 IESWIEEKAKDRIQYYQLDEVFVFPYDMG--SRWRNFKQVFT---W--------SGVPEG 284
Query: 276 NGMSW 280
+G+ W
Sbjct: 285 DGLEW 289
>gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens]
Length = 354
Score = 100 bits (249), Expect = 2e-21
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 88 TVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCV 147
T+ C+KC KP R HHCS C+ C+LKMDHHCPW+NNCVG N+++F F + L C+
Sbjct: 124 TIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCL 183
Query: 148 YCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWH 207
+ + + F + + T + +++L+F+ + +++ +L +H
Sbjct: 184 FVAATVLEYFIKFW------------TNELTDTRAKFHVLFLFFVSAMFFISVLSLFSYH 231
Query: 208 AVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 262
L+ + T+IE R N ++ GC NW+ G D ++WL
Sbjct: 232 CWLVGKNRTTIESF------RAPTFSYGPDGNGFSLGCSKNWRQVFG-DEKKYWL 279
>gi|7705949 zinc finger, DHHC-type containing 2 [Homo sapiens]
Length = 367
Score = 95.9 bits (237), Expect = 4e-20
Identities = 48/174 (27%), Positives = 88/174 (50%), Gaps = 19/174 (10%)
Query: 89 VSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVY 148
+ C +C KP R HHCS+C++C+LKMDHHCPW+NNCVG N+++F F + L C++
Sbjct: 126 IRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLF 185
Query: 149 CSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHA 208
+ F + + T + +++L+F + +++L +L +H
Sbjct: 186 IAATDLQYFIKFW------------TNGLPDTQAKFHIMFLFFAAAMFSVSLSSLFGYHC 233
Query: 209 VLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 262
L+S+ ++++E + R +N ++ G N + G D ++WL
Sbjct: 234 WLVSKNKSTLEAFRSPVFRHGTD------KNGFSLGFSKNMRQVFG-DEKKYWL 280
>gi|226342941 zinc finger, DHHC-type containing 15 isoform 2 [Homo
sapiens]
Length = 328
Score = 95.1 bits (235), Expect = 6e-20
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 83 RNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFM 142
R V C +C KP R HHCS+C CVLKMDHHCPW+NNC+G N+++F F +
Sbjct: 113 RTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYS 172
Query: 143 TLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGA 202
L C+Y + + F + + + P F +++L F+ ++L
Sbjct: 173 VLYCLYIATTVFSYFIKYWRG-----ELPSVRSKFH-------VLFLLFVACMFFVSLVI 220
Query: 203 LTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 262
L +H L+SR +T++E + +N +N G + N + G D + WL
Sbjct: 221 LFGYHCWLVSRNKTTLEAFCTPVFTSGPE------KNGFNLGFIKNIQQVFG-DKKKFWL 273
>gi|21450653 zinc finger, DHHC-type containing 15 isoform 1 [Homo
sapiens]
Length = 337
Score = 95.1 bits (235), Expect = 6e-20
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 83 RNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFM 142
R V C +C KP R HHCS+C CVLKMDHHCPW+NNC+G N+++F F +
Sbjct: 122 RTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYS 181
Query: 143 TLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGA 202
L C+Y + + F + + + P F +++L F+ ++L
Sbjct: 182 VLYCLYIATTVFSYFIKYWRG-----ELPSVRSKFH-------VLFLLFVACMFFVSLVI 229
Query: 203 LTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWL 262
L +H L+SR +T++E + +N +N G + N + G D + WL
Sbjct: 230 LFGYHCWLVSRNKTTLEAFCTPVFTSGPE------KNGFNLGFIKNIQQVFG-DKKKFWL 282
>gi|103471993 huntingtin interacting protein 14 [Homo sapiens]
Length = 632
Score = 94.7 bits (234), Expect = 8e-20
Identities = 55/168 (32%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C C+ KP R+ HC +CNRC+ K DHHCPW+ NCVG NHRYF + FF+ + Y
Sbjct: 439 CSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYLFFLLFMICWMIY 498
Query: 152 GS---WDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHA 208
G W L E TY T +++ ++ S W +SV + W A
Sbjct: 499 GCISYWGLHCET-----TY--TKDGFWTYITQIATCSPWMFWMFLNSVFHFM-----WVA 546
Query: 209 VLI--------SRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDN 248
VL+ G T+ ER +N + + + +P+N+GC+ N
Sbjct: 547 VLLMCQMYQISCLGITTNER-MNARRYKHFKVTTTSIESPFNHGCVRN 593
>gi|206597477 zinc finger, DHHC-type containing 3 isoform 1 [Homo
sapiens]
Length = 299
Score = 92.0 bits (227), Expect = 5e-19
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTL----GCV 147
C KC KP R HHCS+C RC+ KMDHHCPW+NNCVG N +YF F ++ L +
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALI 188
Query: 148 YCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWH 207
+ F E + ++ +PP T + + L++L F +SV T H
Sbjct: 189 MVGFHFLHCFEEDWTKCSSF--SPPTTVILLILLCFEGLLFLIF--TSVMFG----TQVH 240
Query: 208 AVLISRGETSIERHINKKERRRLQAKGR------VFRNPYNYG 244
+ I ET IE+ KKE RR K + VF +P++ G
Sbjct: 241 S--ICTDETGIEQ--LKKEERRWAKKTKWMNMKAVFGHPFSLG 279
>gi|7706133 zinc finger, DHHC-type containing 3 isoform 2 [Homo
sapiens]
Length = 327
Score = 90.5 bits (223), Expect = 2e-18
Identities = 62/181 (34%), Positives = 83/181 (45%), Gaps = 30/181 (16%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMT-------- 143
C KC KP R HHCS+C RC+ KMDHHCPW+NNCVG N +YF F ++
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALI 188
Query: 144 ------LGCVYCSYGSWDLFRE--AYAAIETYHQTPPPTFSFRERMTHK---SLVYLWFL 192
L C + ++ L RE A I + + P FS E + +++ L L
Sbjct: 189 MVGFHFLHCFEEDWTTYGLNREEMAETGISLHEKMQPLNFSSTECSSFSPPTTVILLILL 248
Query: 193 CSSVALALGALTVWHAV---LISRGETSIERHINKKERRRLQAKGR------VFRNPYNY 243
C L L +V I ET IE+ KKE RR K + VF +P++
Sbjct: 249 CFEGLLFLIFTSVMFGTQVHSICTDETGIEQ--LKKEERRWAKKTKWMNMKAVFGHPFSL 306
Query: 244 G 244
G
Sbjct: 307 G 307
>gi|224493964 zinc finger, DHHC-type containing 7 isoform 1 [Homo
sapiens]
Length = 345
Score = 89.4 bits (220), Expect = 4e-18
Identities = 58/160 (36%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVY--- 148
C KC KP R HHCSIC RC+ KMDHHCPW+NNCVG N R+F F ++ L V+
Sbjct: 169 CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALI 228
Query: 149 -CSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWH 207
C + R + + +PP T ++ L FLC L V
Sbjct: 229 LCGFQFISCVRGQWTECSDF--SPPIT-----------VILLIFLCLEGLLFFTFTAVMF 275
Query: 208 AV---LISRGETSIERHINKKE--RRRLQAKG--RVFRNP 240
I ET IER ++K RRL+ +G VF P
Sbjct: 276 GTQIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGP 315
>gi|224493956 zinc finger, DHHC-type containing 7 isoform 2 [Homo
sapiens]
Length = 308
Score = 89.4 bits (220), Expect = 4e-18
Identities = 58/160 (36%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVY--- 148
C KC KP R HHCSIC RC+ KMDHHCPW+NNCVG N R+F F ++ L V+
Sbjct: 132 CPKCCCIKPERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSVHALI 191
Query: 149 -CSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWH 207
C + R + + +PP T ++ L FLC L V
Sbjct: 192 LCGFQFISCVRGQWTECSDF--SPPIT-----------VILLIFLCLEGLLFFTFTAVMF 238
Query: 208 AV---LISRGETSIERHINKKE--RRRLQAKG--RVFRNP 240
I ET IER ++K RRL+ +G VF P
Sbjct: 239 GTQIHSICNDETEIERLKSEKPTWERRLRWEGMKSVFGGP 278
>gi|206597479 zinc finger, DHHC-type containing 3 isoform 3 [Homo
sapiens]
Length = 329
Score = 89.0 bits (219), Expect = 5e-18
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTL----GCV 147
C KC KP R HHCS+C RC+ KMDHHCPW+NNCVG N +YF F ++ L +
Sbjct: 129 CPKCCSIKPDRAHHCSVCKRCIRKMDHHCPWVNNCVGENNQKYFVLFTMYIALISLHALI 188
Query: 148 YCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWH 207
+ F E + ++ +PP T + + L++L F +SV T H
Sbjct: 189 MVGFHFLHCFEEDWTKCSSF--SPPTTVILLILLCFEGLLFLIF--TSVMFG----TQVH 240
Query: 208 AVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNW 249
+ I ET IER K + R + + + NW
Sbjct: 241 S--ICTDETGIERLKRKNQPREHMGSWQSVKETFGGDFSLNW 280
>gi|41152072 zinc finger, DHHC domain containing 5 [Homo sapiens]
Length = 715
Score = 84.3 bits (207), Expect = 1e-16
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 27/159 (16%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C C + +P R HCS+C+ CV + DHHCPW+NNC+G N+RYFF F +T + +
Sbjct: 106 CATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAH-IMGVF 164
Query: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSS--VALALGALTVWHAV 209
G L+ YH E ++ V + +C + + + LT +H V
Sbjct: 165 GFGLLY-------VLYH--------IEELSGVRTAVTMAVMCVAGLFFIPVAGLTGFHVV 209
Query: 210 LISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDN 248
L++RG T+ E ++ K R NP+ GC +N
Sbjct: 210 LVARGRTTNE---------QVTGKFRGGVNPFTNGCCNN 239
>gi|56682974 zinc finger, DHHC domain containing 9 [Homo sapiens]
Length = 364
Score = 84.0 bits (206), Expect = 1e-16
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 84 NDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMT 143
N I + C C +P R HCSIC+ CV + DHHCPW+ NCVG N+RYF+ F ++
Sbjct: 133 NQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLS 192
Query: 144 LGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTH-KSLVYLWFLCSSVALALGA 202
L +Y F Y A+++ F E + V +C ++
Sbjct: 193 LLTIYVF-----AFNIVYVALKSL------KIGFLETLKETPGTVLEVLICFFTLWSVVG 241
Query: 203 LTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYG 244
LT +H L++ +T+ N+ + K RV +NPY++G
Sbjct: 242 LTGFHTFLVALNQTT-----NEDIKGSWTGKNRV-QNPYSHG 277
>gi|56682972 zinc finger, DHHC domain containing 9 [Homo sapiens]
Length = 364
Score = 84.0 bits (206), Expect = 1e-16
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 18/162 (11%)
Query: 84 NDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMT 143
N I + C C +P R HCSIC+ CV + DHHCPW+ NCVG N+RYF+ F ++
Sbjct: 133 NQIVKLKYCYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLS 192
Query: 144 LGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTH-KSLVYLWFLCSSVALALGA 202
L +Y F Y A+++ F E + V +C ++
Sbjct: 193 LLTIYVF-----AFNIVYVALKSL------KIGFLETLKETPGTVLEVLICFFTLWSVVG 241
Query: 203 LTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYG 244
LT +H L++ +T+ N+ + K RV +NPY++G
Sbjct: 242 LTGFHTFLVALNQTT-----NEDIKGSWTGKNRV-QNPYSHG 277
>gi|30425538 zinc finger, DHHC-type containing 21 [Homo sapiens]
Length = 265
Score = 82.4 bits (202), Expect = 4e-16
Identities = 31/58 (53%), Positives = 37/58 (63%)
Query: 91 ICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVY 148
+C KC +P R+HHCS C CV +MDHHCPW+NNCVG NH F CF+ L Y
Sbjct: 91 LCNKCNLMRPKRSHHCSRCGHCVRRMDHHCPWINNCVGEDNHWLFLQLCFYTELLTCY 148
>gi|47933348 zinc finger, DHHC domain containing 13 isoform 2 [Homo
sapiens]
Length = 492
Score = 80.5 bits (197), Expect = 2e-15
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 74 NVIRWFGVGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 133
N+I G D T C C+ KP R+ HC +CN CV + D HC W C+G NH
Sbjct: 282 NIITLAETGSLDFRT--FCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNHH 339
Query: 134 YFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLC 193
Y+ F FF+++ C + YGS+ ++ ++ A T+ + T+ + ++Y+ L
Sbjct: 340 YYIFFLFFLSMVCGWIIYGSF-IYLSSHCA-TTFKEDGLWTYLNQIVACSPWVLYILMLA 397
Query: 194 S-----SVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDN 248
+ S L L L + G TS ER +K+ + ++ + + PYN G + N
Sbjct: 398 TFHFSWSTFLLLNQL----FQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGFMQN 453
>gi|47933346 zinc finger, DHHC domain containing 13 isoform 1 [Homo
sapiens]
Length = 622
Score = 80.5 bits (197), Expect = 2e-15
Identities = 52/180 (28%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 74 NVIRWFGVGRNDIATVSICKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHR 133
N+I G D T C C+ KP R+ HC +CN CV + D HC W C+G NH
Sbjct: 412 NIITLAETGSLDFRT--FCTSCLIRKPLRSLHCHVCNCCVARYDQHCLWTGRCIGFGNHH 469
Query: 134 YFFSFCFFMTLGCVYCSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLC 193
Y+ F FF+++ C + YGS+ ++ ++ A T+ + T+ + ++Y+ L
Sbjct: 470 YYIFFLFFLSMVCGWIIYGSF-IYLSSHCA-TTFKEDGLWTYLNQIVACSPWVLYILMLA 527
Query: 194 S-----SVALALGALTVWHAVLISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDN 248
+ S L L L + G TS ER +K+ + ++ + + PYN G + N
Sbjct: 528 TFHFSWSTFLLLNQL----FQIAFLGLTSHERISLQKQSKHMKQTLSLRKTPYNLGFMQN 583
>gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens]
Length = 765
Score = 80.1 bits (196), Expect = 2e-15
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 25/158 (15%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCV-YCS 150
C C + +P R HCS+C+ CV DHHCPW+NNC+G N+RYFF F ++ V +
Sbjct: 106 CATCHFYRPPRCSHCSVCDNCVEDFDHHCPWVNNCIGRRNYRYFFLFLLSLSAHMVGVVA 165
Query: 151 YGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVL 210
+G + A + H T M + L+F + + LT +H VL
Sbjct: 166 FGLVYVLNHA-EGLGAAHTT--------ITMAVMCVAGLFF------IPVIGLTGFHVVL 210
Query: 211 ISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDN 248
++RG T+ E ++ K R NP+ GC N
Sbjct: 211 VTRGRTTNE---------QVTGKFRGGVNPFTRGCCGN 239
>gi|88900493 zinc finger, DHHC domain containing 19 [Homo sapiens]
Length = 309
Score = 79.0 bits (193), Expect = 5e-15
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 26/176 (14%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C KC + +P RT+HC CN CV DHHC W+NNC+GH N R FFM L C Y
Sbjct: 114 CPKCCFHRPPRTYHCPWCNICVEDFDHHCKWVNNCIGHRNFR------FFMLLVLSLCLY 167
Query: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSL-VYLWFLCSSVALALGALTVWHAVL 210
L + T H FS T K++ + + + + + L L + A+
Sbjct: 168 SGAMLVTCLIFLVRTTHL----PFS-----TDKAIAIVVAVSAAGLLVPLSLLLLIQALS 218
Query: 211 ISRGETSIERHINKKERRRLQAKGRVFRNPYNYGCLDNWKVFLGVDTGRHWLTRVL 266
+S + + K + R LQ NP++ GC NW + + G ++ +
Sbjct: 219 VSSADRTY-----KGKCRHLQG-----YNPFDQGCASNWYLTICAPLGPKYMAEAV 264
>gi|45433499 zinc finger, DHHC-type containing 18 [Homo sapiens]
Length = 388
Score = 73.9 bits (180), Expect = 2e-13
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 19/155 (12%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCF---FMTLGCVY 148
C C +P RT HCS+C+ CV + DHHCPW+ NCVG N+R+F++F F+T
Sbjct: 194 CFTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGRRNYRFFYAFILSLSFLTAFIFA 253
Query: 149 CSYGSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHA 208
C L + + T +TP LV +F S+ L+ +H
Sbjct: 254 CVVTHLTLRAQGSNFLSTLKETPASVL---------ELVICFFSIWSIL----GLSGFHT 300
Query: 209 VLISRGETSIERHINKKERRRLQAKGRVFRNPYNY 243
L++ T+ E +R G NPY++
Sbjct: 301 YLVASNLTTNEDIKGSWSSKR---GGEASVNPYSH 332
>gi|197304690 zinc finger, DHHC-type containing 4 [Homo sapiens]
Length = 344
Score = 73.6 bits (179), Expect = 2e-13
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C C KPAR+ HCS+CN CV + DHHC W+NNC+G +N RYF + +T +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210
Query: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLV-YLWFLCSSVALALGALTV 205
S + Y +T M L+ YL+ + LG + V
Sbjct: 211 VSTTFLVHLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVV 265
>gi|197304688 zinc finger, DHHC-type containing 4 [Homo sapiens]
Length = 344
Score = 73.6 bits (179), Expect = 2e-13
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C C KPAR+ HCS+CN CV + DHHC W+NNC+G +N RYF + +T +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210
Query: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLV-YLWFLCSSVALALGALTV 205
S + Y +T M L+ YL+ + LG + V
Sbjct: 211 VSTTFLVHLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVV 265
>gi|197304686 zinc finger, DHHC-type containing 4 [Homo sapiens]
Length = 344
Score = 73.6 bits (179), Expect = 2e-13
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C C KPAR+ HCS+CN CV + DHHC W+NNC+G +N RYF + +T +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210
Query: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLV-YLWFLCSSVALALGALTV 205
S + Y +T M L+ YL+ + LG + V
Sbjct: 211 VSTTFLVHLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVV 265
>gi|8922448 zinc finger, DHHC-type containing 4 [Homo sapiens]
Length = 344
Score = 73.6 bits (179), Expect = 2e-13
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 1/115 (0%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C C KPAR+ HCS+CN CV + DHHC W+NNC+G +N RYF + +T +
Sbjct: 151 CSTCDLRKPARSKHCSVCNWCVHRFDHHCVWVNNCIGAWNIRYFLIYVLTLTASAATVAI 210
Query: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLV-YLWFLCSSVALALGALTV 205
S + Y +T M L+ YL+ + LG + V
Sbjct: 211 VSTTFLVHLVVMSDLYQETYIDDLGHLHVMDTVFLIQYLFLTFPRIVFMLGFVVV 265
>gi|50234886 zinc finger, DHHC domain containing 23 [Homo sapiens]
Length = 409
Score = 72.8 bits (177), Expect = 3e-13
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 92 CKKCIYPKPARTHHCSICNRCVLKMDHHCPWLNNCVGHYNHRYFFSFCFFMTLGCVYCSY 151
C KC +PAR HC IC CV +MDHHC W+N+CVG NH+ F L VY
Sbjct: 261 CAKCQLVRPARAWHCRICGICVRRMDHHCVWINSCVGESNHQAFILALLIFLLTSVYGIT 320
Query: 152 GSWDLFREAYAAIETYHQTPPPTFSFRERMTHKSLVYLWFLCSSVALALGALTVWHAVLI 211
+ D R+R +L Y + ++ + AL VW++V+I
Sbjct: 321 LTLDTI-------------------CRDRSVFTALFYCPGVYANYSSALSFTCVWYSVII 361
Query: 212 SRG 214
+ G
Sbjct: 362 TAG 364
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.329 0.141 0.499
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,537,187
Number of Sequences: 37866
Number of extensions: 611115
Number of successful extensions: 1694
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1585
Number of HSP's gapped (non-prelim): 63
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.