Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZDHHC8 Sequence: fasta or formatted (765aa) NCBI GI: 32698692
Description:

zinc finger, DHHC domain containing 8

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         62           3
 C cysteine            2.0         15           2
 D aspartate           4.7         36           2
 E glutamate           3.0         23           2
 F phenylalanine       4.2         32           2
 G glycine             9.2         70           2
 H histidine           2.9         22           2
 I isoleucine          2.0         15           2
 K lysine              3.0         23           2
 L leucine             9.9         76           2
 M methionine          1.2          9           1
 N asparagine          2.5         19           2
 P proline            12.8         98           3
 Q glutamine           2.2         17           2
 R arginine            7.2         55           2
 S serine             10.7         82           4
 T threonine           4.7         36           2
 V valine              6.8         52           2
 W tryptophan          0.4          3           1
 Y tyrosine            2.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, DHHC domain containing 8 
ZDHHC5                0.391   zinc finger, DHHC domain containing 5 
ZDHHC9                0.120   zinc finger, DHHC domain containing 9 
ZDHHC9                0.120   zinc finger, DHHC domain containing 9 
ZDHHC14               0.112   zinc finger, DHHC-type containing 14 isoform 2 [Homo...
ZDHHC14               0.111   zinc finger, DHHC-type containing 14 isoform 1 [Homo...
ZDHHC18               0.107   zinc finger, DHHC-type containing 18 
ZDHHC19               0.082   zinc finger, DHHC domain containing 19 
ZDHHC20               0.049   zinc finger, DHHC-type containing 20 
ZDHHC15               0.048   zinc finger, DHHC-type containing 15 isoform 2 [Hom...
ZDHHC15               0.048   zinc finger, DHHC-type containing 15 isoform 1 [Homo...
ZDHHC2                0.048   zinc finger, DHHC-type containing 2 
ZDHHC3                0.043   zinc finger, DHHC-type containing 3 isoform 3 [Homo...
ZDHHC3                0.043   zinc finger, DHHC-type containing 3 isoform 1 [Homo...
ZDHHC4                0.041   zinc finger, DHHC-type containing 4 
ZDHHC4                0.041   zinc finger, DHHC-type containing 4 
ZDHHC4                0.041   zinc finger, DHHC-type containing 4 
ZDHHC4                0.041   zinc finger, DHHC-type containing 4 
ZDHHC3                0.039   zinc finger, DHHC-type containing 3 isoform 2 
ZDHHC7                0.039   zinc finger, DHHC-type containing 7 isoform 2 [Homo...
ZDHHC11               0.038   zinc finger, DHHC-type containing 11 
ZDHHC17               0.038   huntingtin interacting protein 14 
ZDHHC11B              0.036   PREDICTED: zinc finger, DHHC-type containing 11B [H...
ZDHHC11B              0.036   PREDICTED: zinc finger, DHHC-type containing 11B is...
ZDHHC16               0.036   Abl-philin 2 isoform 2 
ZDHHC16               0.036   Abl-philin 2 isoform 4 
ZDHHC12               0.036   zinc finger, DHHC domain containing 12 
ZDHHC6                0.035   zinc finger, DHHC-type containing 6 
ZDHHC7                0.035   zinc finger, DHHC-type containing 7 isoform 1 [Homo...
ZDHHC16               0.032   Abl-philin 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press