Guide to the Human Genome
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Name: ZDHHC5 Sequence: fasta or formatted (715aa) NCBI GI: 41152072
Description:

zinc finger, DHHC domain containing 5

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         41           3
 C cysteine            1.8         13           2
 D aspartate           3.5         25           2
 E glutamate           5.7         41           3
 F phenylalanine       4.5         32           2
 G glycine             8.7         62           2
 H histidine           2.0         14           2
 I isoleucine          2.9         21           1
 K lysine              4.6         33           2
 L leucine             8.4         60           2
 M methionine          1.7         12           1
 N asparagine          2.4         17           2
 P proline            10.2         73           5
 Q glutamine           2.9         21           2
 R arginine            6.9         49           2
 S serine             12.4         89           4
 T threonine           6.4         46           2
 V valine              5.7         41           2
 W tryptophan          0.3          2           1
 Y tyrosine            3.2         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, DHHC domain containing 5 
ZDHHC8                0.424   zinc finger, DHHC domain containing 8 
ZDHHC9                0.130   zinc finger, DHHC domain containing 9 
ZDHHC9                0.130   zinc finger, DHHC domain containing 9 
ZDHHC14               0.115   zinc finger, DHHC-type containing 14 isoform 1 [Homo...
ZDHHC14               0.115   zinc finger, DHHC-type containing 14 isoform 2 [Homo...
ZDHHC18               0.111   zinc finger, DHHC-type containing 18 
ZDHHC19               0.075   zinc finger, DHHC domain containing 19 
ZDHHC20               0.058   zinc finger, DHHC-type containing 20 
ZDHHC15               0.053   zinc finger, DHHC-type containing 15 isoform 2 [Hom...
ZDHHC15               0.053   zinc finger, DHHC-type containing 15 isoform 1 [Homo...
ZDHHC2                0.051   zinc finger, DHHC-type containing 2 
ZDHHC17               0.048   huntingtin interacting protein 14 
ZDHHC3                0.048   zinc finger, DHHC-type containing 3 isoform 3 [Homo...
ZDHHC3                0.048   zinc finger, DHHC-type containing 3 isoform 1 [Homo...
ZDHHC3                0.045   zinc finger, DHHC-type containing 3 isoform 2 
ZDHHC7                0.043   zinc finger, DHHC-type containing 7 isoform 2 [Homo...
ZDHHC4                0.042   zinc finger, DHHC-type containing 4 
ZDHHC4                0.042   zinc finger, DHHC-type containing 4 
ZDHHC4                0.042   zinc finger, DHHC-type containing 4 
ZDHHC4                0.042   zinc finger, DHHC-type containing 4 
ZDHHC16               0.041   Abl-philin 2 isoform 2 
ZDHHC16               0.041   Abl-philin 2 isoform 4 
ZDHHC6                0.041   zinc finger, DHHC-type containing 6 
ZDHHC7                0.040   zinc finger, DHHC-type containing 7 isoform 1 [Homo...
ZDHHC12               0.039   zinc finger, DHHC domain containing 12 
ZDHHC16               0.038   Abl-philin 2 isoform 1 
ZDHHC16               0.038   Abl-philin 2 isoform 1 
ZDHHC11               0.034   zinc finger, DHHC-type containing 11 
ZDHHC11B              0.033   PREDICTED: zinc finger, DHHC-type containing 11B [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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