Guide to the Human Genome
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Name: STMN2 Sequence: fasta or formatted (179aa) NCBI GI: 34850061
Description:

superiorcervical ganglia, neural specific 10

Referenced in:

Cytoskeleton
Neurons

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         18           2
 C cysteine            1.1          2           1
 D aspartate           1.7          3           2
 E glutamate          16.2         29           2
 F phenylalanine       1.7          3           1
 G glycine             1.1          2           1
 H histidine           1.1          2           1
 I isoleucine          6.1         11           2
 K lysine             12.3         22           3
 L leucine            10.6         19           1
 M methionine          3.9          7           1
 N asparagine          5.0          9           3
 P proline             3.9          7           2
 Q glutamine           5.6         10           1
 R arginine            6.7         12           2
 S serine              6.1         11           1
 T threonine           1.7          3           1
 V valine              2.8          5           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   superiorcervical ganglia, neural specific 10 
STMN3                 0.700   SCG10-like-protein 
STMN4                 0.566   stathmin-like 4 
STMN1                 0.516   stathmin 1 isoform a 
STMN1                 0.516   stathmin 1 isoform a 
STMN1                 0.516   stathmin 1 isoform a 
STMN1                 0.466   stathmin 1 isoform b 
SCAPER                0.062   S-phase cyclin A-associated protein in the ER isofo...
SCAPER                0.062   S-phase cyclin A-associated protein in the ER isofo...
GOLGA4                0.062   golgi autoantigen, golgin subfamily a, 4 
TCHH                  0.059   trichohyalin 
NEXN                  0.059   nexilin (F actin binding protein) 
SAFB2                 0.056   scaffold attachment factor B2 
INCENP                0.056   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.056   inner centromere protein antigens 135/155kDa isofor...
CCDC88B               0.056   coiled-coil domain containing 88 
MAP7D2                0.056   MAP7 domain containing 2 
ERC1                  0.053   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.053   RAB6-interacting protein 2 isoform delta 
LOC283685             0.053   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GIGYF2                0.053   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.053   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.053   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.053   GRB10 interacting GYF protein 2 isoform b 
RNF20                 0.053   ring finger protein 20 
MSN                   0.053   moesin 
CROCC                 0.053   ciliary rootlet coiled-coil 
MYH10                 0.050   myosin, heavy polypeptide 10, non-muscle 
MAP4K4                0.050   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.050   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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