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Search of human proteins with 34222104
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34222104 hypothetical protein LOC26074 [Homo sapiens]
(1237 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34222104 hypothetical protein LOC26074 [Homo sapiens] 2521 0.0
gi|118600967 shroom family member 4 [Homo sapiens] 34 0.76
gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens] 34 0.99
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens] 34 0.99
gi|150378498 fragile site-associated protein [Homo sapiens] 33 1.7
gi|209863032 transient receptor potential cation channel, subfam... 32 2.9
gi|209863030 transient receptor potential cation channel, subfam... 32 2.9
gi|209863026 transient receptor potential cation channel, subfam... 32 2.9
gi|209863024 transient receptor potential cation channel, subfam... 32 2.9
gi|7706747 transient receptor potential cation channel, subfamil... 32 2.9
gi|189458889 RWD domain containing 3 isoform b [Homo sapiens] 32 2.9
gi|153252154 RWD domain containing 3 isoform a [Homo sapiens] 32 2.9
gi|171460914 dynamin 1-like isoform 1 [Homo sapiens] 32 3.8
gi|171460918 dynamin 1-like isoform 3 [Homo sapiens] 32 3.8
gi|171460916 dynamin 1-like isoform 2 [Homo sapiens] 32 3.8
gi|14318424 apoptosis-inducing factor (AIF)-like mitchondrion-as... 32 4.9
gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo sapi... 32 4.9
gi|150378449 X-ray radiation resistance associated 1 [Homo sapiens] 32 4.9
gi|209862748 ataxin 3-like [Homo sapiens] 31 6.4
gi|63025206 hypothetical protein LOC221061 [Homo sapiens] 31 6.4
gi|40538772 protein arginine methyltransferase 10 (putative) [Ho... 31 8.4
gi|195546919 growth arrest-specific 7 isoform d [Homo sapiens] 31 8.4
gi|41406080 growth arrest-specific 7 isoform c [Homo sapiens] 31 8.4
gi|41406078 growth arrest-specific 7 isoform b [Homo sapiens] 31 8.4
gi|41406076 growth arrest-specific 7 isoform a [Homo sapiens] 31 8.4
gi|18390347 ATR interacting protein isoform 1 [Homo sapiens] 31 8.4
gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens] 31 8.4
>gi|34222104 hypothetical protein LOC26074 [Homo sapiens]
Length = 1237
Score = 2521 bits (6535), Expect = 0.0
Identities = 1237/1237 (100%), Positives = 1237/1237 (100%)
Query: 1 MSVLTSPRGKVEVVHCRRTESQDVYCIKSLIRKFTCKLFGKLNIIYLLEKANLAVTLCND 60
MSVLTSPRGKVEVVHCRRTESQDVYCIKSLIRKFTCKLFGKLNIIYLLEKANLAVTLCND
Sbjct: 1 MSVLTSPRGKVEVVHCRRTESQDVYCIKSLIRKFTCKLFGKLNIIYLLEKANLAVTLCND 60
Query: 61 KEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPCTPLNTLFMHLFVAVDEYSVGCCK 120
KEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPCTPLNTLFMHLFVAVDEYSVGCCK
Sbjct: 61 KEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPCTPLNTLFMHLFVAVDEYSVGCCK 120
Query: 121 EILRTVYKAVPELHFIFLIVPSYMSLGSTLITVFDQVGNIPCLTYEEDFAVHICHRHSHY 180
EILRTVYKAVPELHFIFLIVPSYMSLGSTLITVFDQVGNIPCLTYEEDFAVHICHRHSHY
Sbjct: 121 EILRTVYKAVPELHFIFLIVPSYMSLGSTLITVFDQVGNIPCLTYEEDFAVHICHRHSHY 180
Query: 181 PQLHVRKARVEDHDDLMPIFMRYDTILKETYGEYFLAELIEAQDEENHAVVCEVEGTAVG 240
PQLHVRKARVEDHDDLMPIFMRYDTILKETYGEYFLAELIEAQDEENHAVVCEVEGTAVG
Sbjct: 181 PQLHVRKARVEDHDDLMPIFMRYDTILKETYGEYFLAELIEAQDEENHAVVCEVEGTAVG 240
Query: 241 FMSVCSRVNMQLLHECFDLGPFHGLCFPHPDDVLESPQDLSVRRSQDAELRSSSQGSQKI 300
FMSVCSRVNMQLLHECFDLGPFHGLCFPHPDDVLESPQDLSVRRSQDAELRSSSQGSQKI
Sbjct: 241 FMSVCSRVNMQLLHECFDLGPFHGLCFPHPDDVLESPQDLSVRRSQDAELRSSSQGSQKI 300
Query: 301 VEELQEPVSPDTMENIQGNIAREAASEEALTAVQSGNVSEPEDIEKLSDISTGYAQYHHV 360
VEELQEPVSPDTMENIQGNIAREAASEEALTAVQSGNVSEPEDIEKLSDISTGYAQYHHV
Sbjct: 301 VEELQEPVSPDTMENIQGNIAREAASEEALTAVQSGNVSEPEDIEKLSDISTGYAQYHHV 360
Query: 361 SSRSLASLILPEEPVHFRPIYRGASAAFCIQLFCIDEKYEARSLDFMNFVFSLFSDKNFC 420
SSRSLASLILPEEPVHFRPIYRGASAAFCIQLFCIDEKYEARSLDFMNFVFSLFSDKNFC
Sbjct: 361 SSRSLASLILPEEPVHFRPIYRGASAAFCIQLFCIDEKYEARSLDFMNFVFSLFSDKNFC 420
Query: 421 VISLPHLTPEFFLIQNFVKMVPFNTCTLEQDLYVFHRAGLLKSINIRFATLLDTPGVENL 480
VISLPHLTPEFFLIQNFVKMVPFNTCTLEQDLYVFHRAGLLKSINIRFATLLDTPGVENL
Sbjct: 421 VISLPHLTPEFFLIQNFVKMVPFNTCTLEQDLYVFHRAGLLKSINIRFATLLDTPGVENL 480
Query: 481 VSTLMLNKSILEDLDRYNKARKDPDGTLLQAFVAEVAEQIVGIAVIRNEMDIEYIRSHYN 540
VSTLMLNKSILEDLDRYNKARKDPDGTLLQAFVAEVAEQIVGIAVIRNEMDIEYIRSHYN
Sbjct: 481 VSTLMLNKSILEDLDRYNKARKDPDGTLLQAFVAEVAEQIVGIAVIRNEMDIEYIRSHYN 540
Query: 541 IEDFIYFSHHQREEHGHMHHFALNPIFRHYTKFFLKEILRLGFKSCLYYRVYPKSREGKF 600
IEDFIYFSHHQREEHGHMHHFALNPIFRHYTKFFLKEILRLGFKSCLYYRVYPKSREGKF
Sbjct: 541 IEDFIYFSHHQREEHGHMHHFALNPIFRHYTKFFLKEILRLGFKSCLYYRVYPKSREGKF 600
Query: 601 QNPYAHSLTSALHYLVPVRPRRQIVYPLEKLGINAPSKAVSKDPMSYALNHTNRKLTLEP 660
QNPYAHSLTSALHYLVPVRPRRQIVYPLEKLGINAPSKAVSKDPMSYALNHTNRKLTLEP
Sbjct: 601 QNPYAHSLTSALHYLVPVRPRRQIVYPLEKLGINAPSKAVSKDPMSYALNHTNRKLTLEP 660
Query: 661 KITVNAKIIVVGASSVGISFLETLVFCSHMKFNNLTLISTHGLPGKKLLDTEQRKFLASD 720
KITVNAKIIVVGASSVGISFLETLVFCSHMKFNNLTLISTHGLPGKKLLDTEQRKFLASD
Sbjct: 661 KITVNAKIIVVGASSVGISFLETLVFCSHMKFNNLTLISTHGLPGKKLLDTEQRKFLASD 720
Query: 721 HCFNDKDYALMSLCSWVNVVVGRMTGIDRAAKHVVLSTDEIVPYDHLILCTGQQYQVPCP 780
HCFNDKDYALMSLCSWVNVVVGRMTGIDRAAKHVVLSTDEIVPYDHLILCTGQQYQVPCP
Sbjct: 721 HCFNDKDYALMSLCSWVNVVVGRMTGIDRAAKHVVLSTDEIVPYDHLILCTGQQYQVPCP 780
Query: 781 TEADISQHLTNREVPNSSQRRYTGKVPCNHFTLNEEEDCFKALIWIRNNSITTEGNIIVY 840
TEADISQHLTNREVPNSSQRRYTGKVPCNHFTLNEEEDCFKALIWIRNNSITTEGNIIVY
Sbjct: 781 TEADISQHLTNREVPNSSQRRYTGKVPCNHFTLNEEEDCFKALIWIRNNSITTEGNIIVY 840
Query: 841 GNTIDTYTTVETLLNLGVSGSRIHLVQPPPASTITCINNYSVESAVADALGAAGVTMYRD 900
GNTIDTYTTVETLLNLGVSGSRIHLVQPPPASTITCINNYSVESAVADALGAAGVTMYRD
Sbjct: 841 GNTIDTYTTVETLLNLGVSGSRIHLVQPPPASTITCINNYSVESAVADALGAAGVTMYRD 900
Query: 901 AILAQWNDGLHPDPIYSASFTTPTKPFRLQCSMFFSFCEKNVDYETFKALNDACLVYDSR 960
AILAQWNDGLHPDPIYSASFTTPTKPFRLQCSMFFSFCEKNVDYETFKALNDACLVYDSR
Sbjct: 901 AILAQWNDGLHPDPIYSASFTTPTKPFRLQCSMFFSFCEKNVDYETFKALNDACLVYDSR 960
Query: 961 LVIDTNFHTNDIAIRAAGSLTKFSNRYYSNEWTHSNFSSKEIGFQLAAAMLHLFDPTLEP 1020
LVIDTNFHTNDIAIRAAGSLTKFSNRYYSNEWTHSNFSSKEIGFQLAAAMLHLFDPTLEP
Sbjct: 961 LVIDTNFHTNDIAIRAAGSLTKFSNRYYSNEWTHSNFSSKEIGFQLAAAMLHLFDPTLEP 1020
Query: 1021 VTEPPANLDRLIPMYKGAKIQGGILPGSYHYLHIAKPAIPTPLEVQMAQPNYGLELVTGS 1080
VTEPPANLDRLIPMYKGAKIQGGILPGSYHYLHIAKPAIPTPLEVQMAQPNYGLELVTGS
Sbjct: 1021 VTEPPANLDRLIPMYKGAKIQGGILPGSYHYLHIAKPAIPTPLEVQMAQPNYGLELVTGS 1080
Query: 1081 AKNGTYFRIHINKYKMVETITCLSREPFPASNYIRLFGQHEQLLNNLCARYDENLITDLY 1140
AKNGTYFRIHINKYKMVETITCLSREPFPASNYIRLFGQHEQLLNNLCARYDENLITDLY
Sbjct: 1081 AKNGTYFRIHINKYKMVETITCLSREPFPASNYIRLFGQHEQLLNNLCARYDENLITDLY 1140
Query: 1141 SYFTEPWCLALFHDRFIDLRKELRQILASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYL 1200
SYFTEPWCLALFHDRFIDLRKELRQILASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYL
Sbjct: 1141 SYFTEPWCLALFHDRFIDLRKELRQILASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYL 1200
Query: 1201 KRVFEESIYKTLVERSTLDYLHYNRYHLPMYAWPGIV 1237
KRVFEESIYKTLVERSTLDYLHYNRYHLPMYAWPGIV
Sbjct: 1201 KRVFEESIYKTLVERSTLDYLHYNRYHLPMYAWPGIV 1237
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 34.3 bits (77), Expect = 0.76
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 23/116 (19%)
Query: 264 GLCFPHPDDVLESPQDLSVRRSQDAELRSSSQGSQKIVEELQEPV--SPDTMENIQGNIA 321
G C +P++VLE PQ LS L S QGSQ + E + S D + I+G++
Sbjct: 1170 GSCALNPEEVLEQPQPLSF-----GHLEGSRQGSQSVPAEQESFALHSSDFLPPIRGHLG 1224
Query: 322 REAASEEA----------LTAVQSGNVSEPEDIEKLS------DISTGYAQYHHVS 361
+ + T+ Q S ++ + S I T Y+ Y+++S
Sbjct: 1225 SQPEQAQPPCYYGIGGLWRTSGQEATESAKQEFQHFSPPSGAPGIPTSYSAYYNIS 1280
>gi|46593000 GRIP1 associated protein 1 isoform 2 [Homo sapiens]
Length = 625
Score = 33.9 bits (76), Expect = 0.99
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 278 QDLSVRRSQDAELRSSSQGSQ----KIVEELQEPVS---PDTMENIQGNIAREAASEEAL 330
Q+L AELR QG + + LQ+ VS D E ++G +A A +L
Sbjct: 230 QELEAANQSLAELRDQRQGERLEHAAALRALQDQVSIQSADAQEQVEGLLAENNALRTSL 289
Query: 331 TAVQSGNVSEPEDIEKLSDISTGYA 355
A++ ++ +++ L + +TG A
Sbjct: 290 AALEQIQTAKTQELNMLREQTTGLA 314
>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
Length = 841
Score = 33.9 bits (76), Expect = 0.99
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 278 QDLSVRRSQDAELRSSSQGSQ----KIVEELQEPVS---PDTMENIQGNIAREAASEEAL 330
Q+L AELR QG + + LQ+ VS D E ++G +A A +L
Sbjct: 283 QELEAANQSLAELRDQRQGERLEHAAALRALQDQVSIQSADAQEQVEGLLAENNALRTSL 342
Query: 331 TAVQSGNVSEPEDIEKLSDISTGYA 355
A++ ++ +++ L + +TG A
Sbjct: 343 AALEQIQTAKTQELNMLREQTTGLA 367
>gi|150378498 fragile site-associated protein [Homo sapiens]
Length = 5005
Score = 33.1 bits (74), Expect = 1.7
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 264 GLCFPHPDDVLESPQDLSVRRSQDAELRSSSQGSQKIVEELQEPVSPDTMENIQGNIARE 323
G C HP +L+ D+S+RRS D RS Q SP + Q N
Sbjct: 3802 GKCVLHPTTLLQEHDDISLRRSYDRSSRSLDQD------------SPSKKKKFQTNY--- 3846
Query: 324 AASEEALTA--VQSGNVSEPEDIEKLSDISTGYAQYHHVSSRSL 365
A++ +T V S ++P D+E G H +S++L
Sbjct: 3847 ASTTHLMTGKKVPSSLQTKPSDLETTVFYIPGVDVKLHYNSKTL 3890
>gi|209863032 transient receptor potential cation channel, subfamily
C, member 4 isoform zeta [Homo sapiens]
Length = 804
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 38 LFGKLNIIYLLEKANLAVTLCNDKEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPC 97
+FG N+I L+ N+ + + N+ +++A ++ W A+ W+S F E +P
Sbjct: 427 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIE---WKFARTKLWMSYFEE-GGTLP- 481
Query: 98 TPLNTL 103
TP N +
Sbjct: 482 TPFNVI 487
>gi|209863030 transient receptor potential cation channel, subfamily
C, member 4 isoform delta [Homo sapiens]
Length = 836
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 38 LFGKLNIIYLLEKANLAVTLCNDKEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPC 97
+FG N+I L+ N+ + + N+ +++A ++ W A+ W+S F E +P
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIE---WKFARTKLWMSYFEE-GGTLP- 654
Query: 98 TPLNTL 103
TP N +
Sbjct: 655 TPFNVI 660
>gi|209863026 transient receptor potential cation channel, subfamily
C, member 4 isoform beta [Homo sapiens]
Length = 893
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 38 LFGKLNIIYLLEKANLAVTLCNDKEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPC 97
+FG N+I L+ N+ + + N+ +++A ++ W A+ W+S F E +P
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIE---WKFARTKLWMSYFEE-GGTLP- 654
Query: 98 TPLNTL 103
TP N +
Sbjct: 655 TPFNVI 660
>gi|209863024 transient receptor potential cation channel, subfamily
C, member 4 isoform epsilon [Homo sapiens]
Length = 982
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 38 LFGKLNIIYLLEKANLAVTLCNDKEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPC 97
+FG N+I L+ N+ + + N+ +++A ++ W A+ W+S F E +P
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIE---WKFARTKLWMSYFEE-GGTLP- 654
Query: 98 TPLNTL 103
TP N +
Sbjct: 655 TPFNVI 660
>gi|7706747 transient receptor potential cation channel, subfamily
C, member 4 isoform alpha [Homo sapiens]
Length = 977
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 38 LFGKLNIIYLLEKANLAVTLCNDKEEIMAQATFLDYRNWNVAKQDDWVSVFRELDSDIPC 97
+FG N+I L+ N+ + + N+ +++A ++ W A+ W+S F E +P
Sbjct: 600 MFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIE---WKFARTKLWMSYFEE-GGTLP- 654
Query: 98 TPLNTL 103
TP N +
Sbjct: 655 TPFNVI 660
>gi|189458889 RWD domain containing 3 isoform b [Homo sapiens]
Length = 195
Score = 32.3 bits (72), Expect = 2.9
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 1075 ELVTGSAKNGTYFRIHINKYKMVETITCLSREPFPASNYIRLFG----QHEQLLNNLCAR 1130
E+++ S +GT FRIH ++ L NY EQL C
Sbjct: 23 EVLSRSETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQCVT 82
Query: 1131 YDENLITDLYSYFTEPWCLALFHDRFIDLRKELRQILASKE 1171
ENL+ S +EP + H+ + +++ LR IL+ E
Sbjct: 83 VKENLLEQAESLLSEP----MVHELVLWIQQNLRHILSQPE 119
>gi|153252154 RWD domain containing 3 isoform a [Homo sapiens]
Length = 267
Score = 32.3 bits (72), Expect = 2.9
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 1075 ELVTGSAKNGTYFRIHINKYKMVETITCLSREPFPASNYIRLFG----QHEQLLNNLCAR 1130
E+++ S +GT FRIH ++ L NY EQL C
Sbjct: 23 EVLSRSETDGTVFRIHTKAEGFMDADIPLELVFHLPVNYPSCLPGISINSEQLTRAQCVT 82
Query: 1131 YDENLITDLYSYFTEPWCLALFHDRFIDLRKELRQILASKE 1171
ENL+ S +EP + H+ + +++ LR IL+ E
Sbjct: 83 VKENLLEQAESLLSEP----MVHELVLWIQQNLRHILSQPE 119
>gi|171460914 dynamin 1-like isoform 1 [Homo sapiens]
Length = 736
Score = 32.0 bits (71), Expect = 3.8
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 271 DDVLESPQDLSVRRSQDAELRSSSQGSQKIVEELQE 306
DD+L +D++ RR + A++ + QG+ +I+ E++E
Sbjct: 697 DDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRE 732
>gi|171460918 dynamin 1-like isoform 3 [Homo sapiens]
Length = 699
Score = 32.0 bits (71), Expect = 3.8
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 271 DDVLESPQDLSVRRSQDAELRSSSQGSQKIVEELQE 306
DD+L +D++ RR + A++ + QG+ +I+ E++E
Sbjct: 660 DDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRE 695
>gi|171460916 dynamin 1-like isoform 2 [Homo sapiens]
Length = 710
Score = 32.0 bits (71), Expect = 3.8
Identities = 12/36 (33%), Positives = 25/36 (69%)
Query: 271 DDVLESPQDLSVRRSQDAELRSSSQGSQKIVEELQE 306
DD+L +D++ RR + A++ + QG+ +I+ E++E
Sbjct: 671 DDLLTESEDMAQRRKEAADMLKALQGASQIIAEIRE 706
>gi|14318424 apoptosis-inducing factor (AIF)-like
mitchondrion-associated inducer of death [Homo sapiens]
Length = 373
Score = 31.6 bits (70), Expect = 4.9
Identities = 19/56 (33%), Positives = 26/56 (46%)
Query: 723 FNDKDYALMSLCSWVNVVVGRMTGIDRAAKHVVLSTDEIVPYDHLILCTGQQYQVP 778
F K + S+ N G + GID + V+L E +P+ HLIL TG P
Sbjct: 61 FAKKTFISYSVTFKDNFRQGLVVGIDLKNQMVLLQGGEALPFSHLILATGSTGPFP 116
>gi|38327634 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Homo
sapiens]
Length = 670
Score = 31.6 bits (70), Expect = 4.9
Identities = 18/90 (20%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 275 ESPQDLSVRRSQDAELRSSSQGSQKIVEELQEPVSPDTMENIQGNIAREAASEEALTAVQ 334
+ +L++ +Q+ ++ + GS+K+ + Q+P++ E G +++EA
Sbjct: 28 QGASNLTLSETQNGDVSEETMGSRKVKKSKQKPMNVGLSETQNGGMSQEAV--------- 78
Query: 335 SGNVSEPEDIEKLSDISTGYAQYHHVSSRS 364
GN+ + +K + ++ G A +S S
Sbjct: 79 -GNIKVTKSPQKSTVLTNGEAAMQSSNSES 107
>gi|150378449 X-ray radiation resistance associated 1 [Homo sapiens]
Length = 792
Score = 31.6 bits (70), Expect = 4.9
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 338 VSEPEDIEKLSDISTGYAQYHHVSSRSLASLILPEEPVHFRPIYRGASAAFCIQLFCIDE 397
V +P D+ ++ + +H V + + +LP E H P + AF + I
Sbjct: 99 VRKPSDLCTINAKENDFKHFHSVIYINASENLLPLEAFHTFPALKELDLAF-NGIKTIYV 157
Query: 398 KY-EARSLDFMNFVFSLFSDKNFCVIS-LPHLTPEFFLIQNFVKMVPFNTCTLEQDLYV 454
KY + + L+F++ F+ + + C + LPHL L N + +P N EQ+ V
Sbjct: 158 KYGDFKLLEFLDLSFNSLTVEAICDLGILPHLR-VLLLTGNGLTSLPPNLAVAEQEASV 215
>gi|209862748 ataxin 3-like [Homo sapiens]
Length = 355
Score = 31.2 bits (69), Expect = 6.4
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 1114 IRLFGQHEQLLNNLCARYDENLITDLYSYFTEPWCLALFHDRFIDLRKELRQILASKEEE 1173
IR FG+H LN+L A LI+D CLA F R L+++ + K
Sbjct: 123 IRKFGKHWFNLNSLLA--GPELISDT--------CLANFLAR---LQQQAYSVFVVKG-- 167
Query: 1174 DLPSIE--QLAHQIEDEEINPTEKPRQYLKRVFEESIYKTLVER 1215
DLP E QL I EE++ + + L + E +YKT++E+
Sbjct: 168 DLPDCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVLEK 211
>gi|63025206 hypothetical protein LOC221061 [Homo sapiens]
Length = 890
Score = 31.2 bits (69), Expect = 6.4
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 263 HGLCFPHPDDVLE----SPQDLSVRRSQDAELRSSSQGSQKIVEELQEPVSPDTMENIQG 318
H FPHP ++ S Q +S + QDA R S + + E L P S + Q
Sbjct: 622 HAGIFPHPSSQIQPQPLSSQAISQQHLQDAGTREWSPQNASMSESLSIPASLNDAALAQM 681
Query: 319 NIAREAASEEALTAVQSG 336
N + +E+AL + G
Sbjct: 682 NSEVQLLTEKALMELGGG 699
>gi|40538772 protein arginine methyltransferase 10 (putative) [Homo
sapiens]
Length = 845
Score = 30.8 bits (68), Expect = 8.4
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 415 SDKNFCVISLPHLTPEFFLIQNFVKMVPFNTCTLEQDLYVFHRAGLLKSINIRFATLLDT 474
SDK + +I L + P + Q ++ + C L+ +F + L+ + + TLL+
Sbjct: 652 SDKLWSIIILDVIEPSGLIQQEIMEKAAISRCLLQSGGKIFPQYVLMFGLLVESQTLLEE 711
Query: 475 PGVENLVSTLMLN 487
V+ TL LN
Sbjct: 712 NAVQGTERTLGLN 724
>gi|195546919 growth arrest-specific 7 isoform d [Homo sapiens]
Length = 412
Score = 30.8 bits (68), Expect = 8.4
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1154 DRFIDLRKELRQI---LASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYLKRVFEESIYK 1210
+R DL + +Q+ L++K EED+ + + Q D+ + + Q + FEE +
Sbjct: 281 ERQRDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTT 340
Query: 1211 TL-VERSTLDYLHYNRYHLPMY 1231
TL +ER ++ + R HL Y
Sbjct: 341 TLELERLEVERVEMIRQHLCQY 362
>gi|41406080 growth arrest-specific 7 isoform c [Homo sapiens]
Length = 476
Score = 30.8 bits (68), Expect = 8.4
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1154 DRFIDLRKELRQI---LASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYLKRVFEESIYK 1210
+R DL + +Q+ L++K EED+ + + Q D+ + + Q + FEE +
Sbjct: 345 ERQRDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTT 404
Query: 1211 TL-VERSTLDYLHYNRYHLPMY 1231
TL +ER ++ + R HL Y
Sbjct: 405 TLELERLEVERVEMIRQHLCQY 426
>gi|41406078 growth arrest-specific 7 isoform b [Homo sapiens]
Length = 416
Score = 30.8 bits (68), Expect = 8.4
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1154 DRFIDLRKELRQI---LASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYLKRVFEESIYK 1210
+R DL + +Q+ L++K EED+ + + Q D+ + + Q + FEE +
Sbjct: 285 ERQRDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTT 344
Query: 1211 TL-VERSTLDYLHYNRYHLPMY 1231
TL +ER ++ + R HL Y
Sbjct: 345 TLELERLEVERVEMIRQHLCQY 366
>gi|41406076 growth arrest-specific 7 isoform a [Homo sapiens]
Length = 336
Score = 30.8 bits (68), Expect = 8.4
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1154 DRFIDLRKELRQI---LASKEEEDLPSIEQLAHQIEDEEINPTEKPRQYLKRVFEESIYK 1210
+R DL + +Q+ L++K EED+ + + Q D+ + + Q + FEE +
Sbjct: 205 ERQRDLEMKTQQLEIKLSNKTEEDIKKARRKSTQAGDDLMRCVDLYNQAQSKWFEEMVTT 264
Query: 1211 TL-VERSTLDYLHYNRYHLPMY 1231
TL +ER ++ + R HL Y
Sbjct: 265 TLELERLEVERVEMIRQHLCQY 286
>gi|18390347 ATR interacting protein isoform 1 [Homo sapiens]
Length = 791
Score = 30.8 bits (68), Expect = 8.4
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 1102 CLSRE-PFP----ASNYIRLFGQHEQLLNNLCARYDENLITDLYSYFTEPWCLALFHDRF 1156
CLS E P P A + L H+QL LC+ + L+ LY Y T ++
Sbjct: 593 CLSPETPLPSVLLAVELLSLLADHDQLAPQLCSHSEGCLLLLLYMYITSRPDRVALETQW 652
Query: 1157 IDLRKELRQILA 1168
+ L +E+ +LA
Sbjct: 653 LQLEQEVVWLLA 664
>gi|187608777 NF-kappa-B inhibitor-like protein 2 [Homo sapiens]
Length = 1378
Score = 30.8 bits (68), Expect = 8.4
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 455 FHRAGLLKSINIRFATLLDTPGVENLVSTLMLNKSILEDLDRYNKARK-DPDGTLLQAFV 513
F RA +RFA LLD PG E + + L ++ + D + R + + L V
Sbjct: 327 FPRAAEAYQKQLRFAELLDRPGAERAIIHVSLATTLGDMKDHHGAVRHYEEELRLRSGNV 386
Query: 514 AEVAEQIVGIAVIRNEMDIEY 534
E A+ + IA+ R E Y
Sbjct: 387 LEEAKTWLNIALSREEAGDAY 407
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,179,145
Number of Sequences: 37866
Number of extensions: 2120988
Number of successful extensions: 5198
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 5183
Number of HSP's gapped (non-prelim): 31
length of query: 1237
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1123
effective length of database: 13,930,794
effective search space: 15644281662
effective search space used: 15644281662
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.