Guide to the Human Genome
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Name: GPX2 Sequence: fasta or formatted (190aa) NCBI GI: 32967607
Description:

glutathione peroxidase 2

Referenced in:

Glutathione Pathways
Selenium Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          8           1
 C cysteine            2.1          4           1
 D aspartate           5.3         10           2
 E glutamate           6.3         12           2
 F phenylalanine       7.9         15           1
 G glycine             5.8         11           3
 H histidine           1.1          2           1
 I isoleucine          5.8         11           2
 K lysine              5.3         10           1
 L leucine             9.5         18           2
 M methionine          1.1          2           1
 N asparagine          5.8         11           1
 P proline             7.4         14           1
 Q glutamine           4.2          8           1
 R arginine            6.8         13           2
 S serine              4.7          9           1
 T threonine           5.3         10           3
 U selenocysteine      0.5          1           1
 V valine              6.3         12           2
 W tryptophan          1.1          2           1
 Y tyrosine            3.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutathione peroxidase 2 
GPX1                  0.628   glutathione peroxidase 1 isoform 1 
GPX5                  0.351   glutathione peroxidase 5 isoform 1 precursor 
GPX3                  0.329   glutathione peroxidase 3 precursor 
GPX6                  0.307   glutathione peroxidase 6 
GPX4                  0.182   glutathione peroxidase 4 isoform C precursor 
GPX4                  0.182   glutathione peroxidase 4 isoform A precursor 
GPX1                  0.168   glutathione peroxidase 1 isoform 2 
GPX7                  0.166   glutathione peroxidase 7 
GPX4                  0.155   glutathione peroxidase 4 isoform B precursor 
GPX8                  0.144   glutathione peroxidase 8 
PKHD1L1               0.033   fibrocystin L 
ATP8B2                0.019   ATPase, class I, type 8B, member 2 isoform a 
MORC1                 0.008   MORC family CW-type zinc finger 1 
PPM1M                 0.005   protein phosphatase 1M isoform b 
PPM1M                 0.005   protein phosphatase 1M isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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