PACRG 2659

Name: PACRG	Sequence: fasta or formatted (296aa)		NCBI GI: 122939204
Description: parkin co-regulated gene protein isoform 1		Referenced in: Neurons
Other entries for this name: alt prot [257aa] parkin co-regulated gene protein isoform 2 alt prot [257aa] parkin co-regulated gene protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 19 2 C cysteine 2.0 6 1 D aspartate 3.7 11 1 E glutamate 6.8 20 1 F phenylalanine 4.4 13 2 G glycine 6.1 18 2 H histidine 3.0 9 2 I isoleucine 6.4 19 2 K lysine 7.1 21 1 L leucine 10.5 31 2 M methionine 3.0 9 2 N asparagine 5.4 16 1 P proline 7.1 21 2 Q glutamine 4.1 12 2 R arginine 4.4 13 1 S serine 5.4 16 2 T threonine 3.4 10 1 V valine 6.8 20 2 W tryptophan 0.3 1 1 Y tyrosine 3.7 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 parkin co-regulated gene protein isoform 1 PACRG 0.832 parkin co-regulated gene protein isoform 2 PACRG 0.832 parkin co-regulated gene protein isoform 2 PACRGL 0.067 PARK2 co-regulated-like isoform 1 LOC100293423 0.045 PREDICTED: hypothetical protein LOC100290837 0.045 PREDICTED: hypothetical protein XP_002347267 LOC100289388 0.043 PREDICTED: hypothetical protein XP_002343124 ZMAT1 0.043 zinc finger, matrin type 1 isoform 1 SORBS1 0.042 sorbin and SH3 domain containing 1 isoform 4 IFT81 0.040 intraflagellar transport 81-like isoform 2 NEK4 0.035 NIMA-related kinase 4 ARGFX 0.035 arginine-fifty homeobox BCAS4 0.035 breast carcinoma amplified sequence 4 isoform a [Hom... NOS3 0.033 nitric oxide synthase 3 isoform 4 ADRA1A 0.033 alpha-1A-adrenergic receptor isoform 2 TRIM54 0.031 ring finger protein 30 isoform 1 LOC285501 0.031 hypothetical protein LOC285501 FAM76A 0.031 hypothetical protein LOC199870 isoform 2 FAM76A 0.031 hypothetical protein LOC199870 isoform 1 MAP4K1 0.028 mitogen-activated protein kinase kinase kinase kinase... MYL10 0.028 myosin, light chain 10, regulatory SYT14 0.028 synaptotagmin XIV isoform 2 SYT14 0.028 synaptotagmin XIV isoform 1 C15orf40 0.028 hypothetical protein LOC123207 isoform b CENPL 0.028 centromere protein L isoform 1 NXNL2 0.026 nucleoredoxin-like 2 isoform 2 SLC36A3 0.026 solute carrier family 36, member 3 isoform 1 RPGRIP1L 0.024 RPGRIP1-like isoform a C11orf80 0.024 hypothetical protein LOC79703 IFT20 0.024 intraflagellar transport protein IFT20 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.