Guide to the Human Genome
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Name: NXNL2 Sequence: fasta or formatted (135aa) NCBI GI: 239735607
Description:

nucleoredoxin-like 2 isoform 2

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [156aa] nucleoredoxin-like 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            14.8         20           3
 C cysteine            4.4          6           1
 D aspartate           5.2          7           1
 E glutamate           5.9          8           1
 F phenylalanine       5.2          7           1
 G glycine             4.4          6           1
 H histidine           3.0          4           1
 I isoleucine          1.5          2           1
 K lysine              1.5          2           1
 L leucine            15.6         21           2
 M methionine          2.2          3           1
 N asparagine          1.5          2           1
 P proline             5.2          7           1
 Q glutamine           2.2          3           1
 R arginine            6.7          9           2
 S serine              7.4         10           2
 T threonine           3.0          4           1
 V valine              7.4         10           2
 W tryptophan          0.7          1           1
 Y tyrosine            2.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleoredoxin-like 2 isoform 2 
NXNL2                 0.729   nucleoredoxin-like 2 isoform 1 
NXNL1                 0.130   nucleoredoxin-like 1 
C15orf40              0.105   hypothetical protein LOC123207 isoform b 
NEK4                  0.101   NIMA-related kinase 4 
NXN                   0.101   nucleoredoxin 
MYL10                 0.093   myosin, light chain 10, regulatory 
IFT20                 0.085   intraflagellar transport protein IFT20 
SRP9                  0.081   signal recognition particle 9kDa isoform 1 
C20orf30              0.081   hypothetical protein LOC29058 isoform 1 
C11orf80              0.081   hypothetical protein LOC79703 
CENPL                 0.077   centromere protein L isoform 1 
SLC36A3               0.077   solute carrier family 36, member 3 isoform 1 
LOC100289388          0.077   PREDICTED: hypothetical protein XP_002343124 
IFT81                 0.077   intraflagellar transport 81-like isoform 2 
ADRA1A                0.069   alpha-1A-adrenergic receptor isoform 2 
MAP4K1                0.065   mitogen-activated protein kinase kinase kinase kinase...
LOC285501             0.065   hypothetical protein LOC285501 
LOC100293423          0.065   PREDICTED: hypothetical protein 
LOC100290837          0.065   PREDICTED: hypothetical protein XP_002347267 
PACRG                 0.061   parkin co-regulated gene protein isoform 1 
CCNJL                 0.061   cyclin J-like 
SYT14                 0.061   synaptotagmin XIV isoform 2 
SYT14                 0.061   synaptotagmin XIV isoform 1 
ZMAT1                 0.057   zinc finger, matrin type 1 isoform 1 
FAM76A                0.057   hypothetical protein LOC199870 isoform 2 
FAM76A                0.057   hypothetical protein LOC199870 isoform 1 
RPGRIP1L              0.057   RPGRIP1-like isoform a 
TRIM54                0.053   ring finger protein 30 isoform 1 
SORBS1                0.053   sorbin and SH3 domain containing 1 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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